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PDB: 141 件
1PIP
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CRYSTAL STRUCTURE OF PAPAIN-SUCCINYL-GLN-VAL-VAL-ALA-ALA-P-NITROANILIDE COMPLEX AT 1.7 ANGSTROMS RESOLUTION: NONCOVALENT BINDING MODE OF A COMMON SEQUENCE OF ENDOGENOUS THIOL PROTEASE INHIBITORS
分子名称: Papain, SUCCINYL-GLN-VAL-VAL-ALA-ALA-P-NITROANILIDE
著者Yamamoto, A, Tomoo, K, Doi, M, Ohishi, H, Inoue, M, Ishida, T, Yamamoto, D, Tsuboi, S, Okamoto, H, Okada, Y.
登録日1992-10-03
公開日1993-10-31
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of papain-succinyl-Gln-Val-Val-Ala-Ala-p-nitroanilide complex at 1.7-A resolution: noncovalent binding mode of a common sequence of endogenous thiol protease inhibitors.
Biochemistry, 31, 1992
4WCO
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Crystal structure of extracellular domain of human lectin-like transcript 1 (LLT1), the ligand for natural killer receptor-P1A
分子名称: ACETATE ION, C-type lectin domain family 2 member D, SULFATE ION, ...
著者Kita, S, Matsubara, H, Kasai, Y, Tamaoki, T, Okabe, Y, Fukuhara, H, Kamishikiryo, J, Ose, T, Kuroki, K, Maenaka, K.
登録日2014-09-05
公開日2015-06-24
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Crystal structure of extracellular domain of human lectin-like transcript 1 (LLT1), the ligand for natural killer receptor-P1A
Eur.J.Immunol., 45, 2015
1V40
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First Inhibitor Complex Structure of Human Hematopoietic Prostaglandin D Synthase
分子名称: 3-(1,3-BENZOTHIAZOL-2-YL)-2-(1,4-DIOXO-1,2,3,4-TETRAHYDROPHTHALAZIN-6-YL)-5-[(E)-2-PHENYLVINYL]-3H-TETRAAZOL-2-IUM, GLUTATHIONE, GLYCEROL, ...
著者Inoue, T, Okano, Y, Kado, Y, Aritake, K, Irikura, D, Uodome, N, Kinugasa, S, Okazaki, N, Matsumura, H, Kai, Y, Urade, Y.
登録日2003-11-07
公開日2004-11-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献First determination of the inhibitor complex structure of human hematopoietic prostaglandin D synthase.
J.Biochem.(Tokyo), 135, 2004
1WSV
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Crystal Structure of Human T-protein of Glycine Cleavage System
分子名称: Aminomethyltransferase, N-[4-({[(6S)-2-AMINO-4-HYDROXY-5-METHYL-5,6,7,8-TETRAHYDROPTERIDIN-6-YL]METHYL}AMINO)BENZOYL]-L-GLUTAMIC ACID, SULFATE ION
著者Okamura-Ikeda, K, Hosaka, H, Yoshimura, M, Yamashita, E, Toma, S, Nakagawa, A, Fujiwara, K, Motokawa, Y, Taniguchi, H.
登録日2004-11-11
公開日2005-08-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structure of Human T-protein of Glycine Cleavage System at 2.0A Resolution and its Implication for Understanding Non-ketotic Hyperglycinemia
J.Mol.Biol., 351, 2005
1WSR
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Crystal Structure of Human T-protein of Glycine Cleavage System
分子名称: Aminomethyltransferase, SULFATE ION
著者Okamura-Ikeda, K, Hosaka, H, Yoshimura, M, Yamashita, E, Toma, S, Nakagawa, A, Fujiwara, K, Motokawa, Y, Taniguchi, H.
登録日2004-11-10
公開日2005-08-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Human T-protein of Glycine Cleavage System at 2.0A Resolution and its Implication for Understanding Non-ketotic Hyperglycinemia
J.Mol.Biol., 351, 2005
1X2H
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Crystal Structure of Lipate-Protein Ligase A from Escherichia coli complexed with lipoic acid
分子名称: LIPOIC ACID, Lipoate-protein ligase A
著者Fujiwara, K, Toma, S, Okamura-Ikeda, K, Motokawa, Y, Nakagawa, A, Taniguchi, H.
登録日2005-04-23
公開日2005-08-02
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Crystal structure of lipoate-protein ligase A from Escherichia coli: Determination of the lipoic acid-binding site
J.Biol.Chem., 280, 2005
1X2G
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Crystal Structure of Lipate-Protein Ligase A from Escherichia coli
分子名称: Lipoate-protein ligase A
著者Fujiwara, K, Toma, S, Okamura-Ikeda, K, Motokawa, Y, Nakagawa, A, Taniguchi, H.
登録日2005-04-23
公開日2005-08-02
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of lipoate-protein ligase A from Escherichia coli: Determination of the lipoic acid-binding site
J.Biol.Chem., 280, 2005
4U4P
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Crystal structure of the human condensin SMC hinge domain heterodimer with short coiled coils
分子名称: Structural maintenance of chromosomes protein 2, Structural maintenance of chromosomes protein 4
著者Uchiyama, S, Kawahara, K, Hosokawa, Y, Fukakusa, S, Oki, H, Nakamura, S, Noda, M, Takino, R, Miyahara, Y, Maruno, T, Kobayashi, Y, Ohkubo, T, Fukui, K.
登録日2014-07-24
公開日2015-08-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structural basis for dimer information and DNA recognition of human SMC proteins
to be published
1IA0
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KIF1A HEAD-MICROTUBULE COMPLEX STRUCTURE IN ATP-FORM
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, KINESIN-LIKE PROTEIN KIF1A, ...
著者Kikkawa, M, Sablin, E.P, Okada, Y, Yajima, H, Fletterick, R.J, Hirokawa, N.
登録日2001-03-22
公開日2002-03-22
最終更新日2021-10-27
実験手法ELECTRON MICROSCOPY (15 Å)
主引用文献Switch-based Mechanism of Kinesin Motors
Nature, 411, 2001
2IBX
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Influenza virus (VN1194) H5 HA
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
著者Yamada, S, Russell, R.J, Gamblin, S.J, Skehel, J.J, Kawaoka, Y.
登録日2006-09-12
公開日2006-11-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Haemagglutinin mutations responsible for the binding of H5N1 influenza A viruses to human-type receptors.
Nature, 444, 2006
1I6I
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CRYSTAL STRUCTURE OF THE KIF1A MOTOR DOMAIN COMPLEXED WITH MG-AMPPCP
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, KINESIN-LIKE PROTEIN KIF1A, MAGNESIUM ION, ...
著者Kikkawa, M, Sablin, E.P, Okada, Y, Yajima, H, Fletterick, R.J, Hirokawa, N.
登録日2001-03-02
公開日2001-05-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Switch-based mechanism of kinesin motors
Nature, 411, 2001
1I5S
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CRYSTAL STRUCTURE OF THE KIF1A MOTOR DOMAIN COMPLEXED WITH MG-ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, KINESIN-LIKE PROTEIN KIF1A, MAGNESIUM ION
著者Kikkawa, M, Sablin, E.P, Okada, Y, Yajima, H, Fletterick, R.J, Hirokawa, N.
登録日2001-02-28
公開日2001-05-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Switch-based mechanism of kinesin motors
Nature, 411, 2001
1VFZ
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Crystal Structure of the Kif1A Motor Domain Complexed With ADP-Mg-VO4
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PROTEIN (Fusion protein consisting of Kinesin-like protein KIF1A, ...
著者Nitta, R, Kikkawa, M, Okada, Y, Hirokawa, N.
登録日2004-04-19
公開日2004-08-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献KIF1A Alternately Uses Two Loops to Bind Microtubules
Science, 305, 2004
2K6Q
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BU of 2k6q by Molmil
LC3 p62 complex structure
分子名称: Microtubule-associated proteins 1A/1B light chain 3B, p62_peptide from Sequestosome-1
著者Noda, N, Kumeta, H, Nakatogawa, H, Satoo, K, Adachi, W, Ishii, J, Fujioka, Y, Ohsumi, Y, Inagaki, F.
登録日2008-07-17
公開日2008-09-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis of target recognition by ATG8/LC3 during selective autophagy
To be Published
2LI5
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NMR structure of Atg8-Atg7C30 complex
分子名称: Autophagy-related protein 8, Ubiquitin-like modifier-activating enzyme ATG7
著者Kumeta, H, Satoo, K, Noda, N.N, Fujioka, Y, Ogura, K, Nakatogawa, H, Ohsumi, Y, Inagaki, F.
登録日2011-08-23
公開日2011-11-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis of Atg8 activation by a homodimeric E1, Atg7.
Mol.Cell, 44, 2011
6IDJ
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Crystal structure of human DHODH in complex with ferulenol
分子名称: 4-oxidanyl-3-[(2~{E},6~{E})-3,7,11-trimethyldodeca-2,6,10-trienyl]chromen-2-one, ACETATE ION, Dihydroorotate dehydrogenase (quinone), ...
著者Shiba, T, Inaoka, D.K, Sato, D, Hartuti, E.D, Amalia, E, Nagahama, M, Yoshioka, Y, Matsubayashi, M, Balogun, E.O, Tsuji, N, Kita, K, Harada, S.
登録日2018-09-10
公開日2019-09-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and Biochemical Features of Eimeria tenella Dihydroorotate Dehydrogenase, a Potential Drug Target.
Genes (Basel), 11, 2020
1V8J
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The Crystal Structure of the Minimal Functional Domain of the Microtubule Destabilizer KIF2C Complexed with Mg-ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF2C, MAGNESIUM ION
著者Ogawa, T, Nitta, R, Okada, Y, Hirokawa, N.
登録日2004-01-09
公開日2004-03-02
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3.24 Å)
主引用文献A common mechanism for microtubule destabilizers-M type kinesins stabilize curling of the protofilament using the class-specific neck and loops.
Cell(Cambridge,Mass.), 116, 2004
1V8K
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The Crystal Structure of the Minimal Functional Domain of the Microtubule Destabilizer KIF2C Complexed with Mg-AMPPNP
分子名称: Kinesin-like protein KIF2C, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Ogawa, T, Nitta, R, Okada, Y, Hirokawa, N.
登録日2004-01-09
公開日2004-03-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献A common mechanism for microtubule destabilizers-M type kinesins stabilize curling of the protofilament using the class-specific neck and loops.
Cell(Cambridge,Mass.), 116, 2004
1VFV
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Crystal Structure of the Kif1A Motor Domain Complexed With Mg-AMPPNP
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PROTEIN (Fusion protein consisting of Kinesin-like protein KIF1A, ...
著者Nitta, R, Kikkawa, M, Okada, Y, Hirokawa, N.
登録日2004-04-19
公開日2004-08-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献KIF1A Alternately Uses Two Loops to Bind Microtubules
Science, 305, 2004
1VFX
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Crystal Structure of the Kif1A Motor Domain Complexed With ADP-Mg-AlFx
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, ...
著者Nitta, R, Kikkawa, M, Okada, Y, Hirokawa, N.
登録日2004-04-19
公開日2004-08-10
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献KIF1A Alternately Uses Two Loops to Bind Microtubules
Science, 305, 2004
2KWC
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The NMR structure of the autophagy-related protein Atg8
分子名称: Autophagy-related protein 8
著者Kumeta, H, Watanabe, M, Nakatogawa, H, Yamaguchi, M, Ogura, K, Adachi, W, Fujioka, Y, Noda, N.N, Ohsumi, Y, Inagaki, F.
登録日2010-04-05
公開日2010-05-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The NMR structure of the autophagy-related protein Atg8
J.Biomol.Nmr, 47, 2010
1VFW
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Crystal Structure of the Kif1A Motor Domain Complexed With Mg-AMPPNP
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PROTEIN (Fusion protein consisting of Kinesin-like protein KIF1A, ...
著者Nitta, R, Kikkawa, M, Okada, Y, Hirokawa, N.
登録日2004-04-19
公開日2004-08-10
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献KIF1A Alternately Uses Two Loops to Bind Microtubules
Science, 305, 2004
4BGW
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Crystal Structure of H5 (VN1194) Influenza Haemagglutinin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Xiong, X, Coombs, P, Martin, S.R, Liu, J, Xiao, H, McCauley, J.W, Locher, K, Walker, P.A, Collins, P.J, Kawaoka, Y, Skehel, J.J, Gamblin, S.J.
登録日2013-03-29
公開日2013-04-24
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Receptor Binding by a Ferret-Transmissible H5 Avian Influenza Virus.
Nature, 497, 2013
4BH3
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Haemagglutinin from a Transmissible Mutant H5 Influenza Virus in Complex with Human Receptor Analogue 6'-SLN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HEMAGGLUTININ, ...
著者Xiong, X, Coombs, P.J, Martin, S.R, Liu, J, Xiao, H, McCauley, J.W, Locher, K, Walker, P.A, Collins, P.J, Kawaoka, Y, Skehel, J.J, Gamblin, S.J.
登録日2013-03-29
公開日2013-04-24
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Receptor Binding by a Ferret-Transmissible H5 Avian Influenza Virus
Nature, 497, 2013
4BH4
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Haemagglutinin from a Transmissible Mutant H5 Influenza Virus in Complex with Avian Receptor Analogue 3'-SLN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HEMAGGLUTININ, ...
著者Xiong, X, Coombs, P.J, Martin, S.R, Liu, J, Xiao, H, McCauley, J.W, Locher, K, Walker, P.A, Collins, P.J, Kawaoka, Y, Skehel, J.J, Gamblin, S.J.
登録日2013-03-29
公開日2013-04-24
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Receptor Binding by a Ferret-Transmissible H5 Avian Influenza Virus
Nature, 497, 2013

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