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PDB: 46 件

7DY3
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High resolution crystal structure of hemoglobin M Iwate.
分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
著者Ohki, M, Park, S.-Y.
登録日2021-01-20
公開日2022-01-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献High resolution crystal structure of hemoglobin M Iwate.
To Be Published
7DY4
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BU of 7dy4 by Molmil
High resolution crystal structure of hemoglobin M Boston.
分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
著者Ohki, M, Park, S.-Y.
登録日2021-01-20
公開日2022-01-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献High resolution crystal structure of hemoglobin M Boston.
To Be Published
5X4U
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BU of 5x4u by Molmil
PAC from Oscillatoriaacuminata after 60 seconds photoactivation
分子名称: FLAVIN MONONUCLEOTIDE, Photoactivated adenylyl cyclase
著者Ohki, M, Park, S.-Y.
登録日2017-02-14
公開日2017-07-26
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular mechanism of photoactivation of a light-regulated adenylate cyclase.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5X4T
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PAC from Oscillatoria acuminata after 20 seconds photoactivation
分子名称: FLAVIN MONONUCLEOTIDE, Photoactivated adenylyl cyclase
著者Ohki, M, Park, S.-Y.
登録日2017-02-14
公開日2017-07-26
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.601 Å)
主引用文献Molecular mechanism of photoactivation of a light-regulated adenylate cyclase.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5X4V
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Roseoflavin substituted OaPAC
分子名称: 1-deoxy-1-[8-(dimethylamino)-7-methyl-2,4-dioxo-3,4-dihydrobenzo[g]pteridin-10(2H)-yl]-D-ribitol, Photoactivated adenylyl cyclase
著者Ohki, M, Park, S.-Y.
登録日2017-02-14
公開日2017-07-26
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular mechanism of photoactivation of a light-regulated adenylate cyclase.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5X2T
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Direct Observation of Conformational Population Shifts in Hemoglobin: Crystal Structure of Half-Liganded Hemoglobin after Adding 4 mM bezafibrate pH 7.2.
分子名称: 2-[P-[2-P-CHLOROBENZAMIDO)ETHYL]PHENOXY]-2-METHYLPROPIONIC ACID, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
著者Ohki, M, Park, S.-Y.
登録日2017-02-02
公開日2017-09-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Direct observation of conformational population shifts in crystalline human hemoglobin.
J. Biol. Chem., 292, 2017
5X2S
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BU of 5x2s by Molmil
Direct Observation of Conformational Population Shifts in Hemoglobin: Crystal Structure of Half-Liganded Hemoglobin after Adding 4 mM bezafibrate pH 6.5.
分子名称: 2-[P-[2-P-CHLOROBENZAMIDO)ETHYL]PHENOXY]-2-METHYLPROPIONIC ACID, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
著者Ohki, M, Park, S.-Y.
登録日2017-02-02
公開日2017-09-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Direct observation of conformational population shifts in crystalline human hemoglobin.
J. Biol. Chem., 292, 2017
5X2U
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Direct Observation of Conformational Population Shifts in Hemoglobin: Crystal Structure of Half-Liganded Hemoglobin after Adding 80 mM phosphate pH 6.7.
分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Ohki, M, Park, S.-Y.
登録日2017-02-02
公開日2017-09-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Direct observation of conformational population shifts in crystalline human hemoglobin.
J. Biol. Chem., 292, 2017
5X2R
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BU of 5x2r by Molmil
Direct Observation of Conformational Population Shifts in Hemoglobin: Crystal Structure of Half-Liganded Hemoglobin after Adding 10 mM phosphate pH 6.9.
分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Ohki, M, Park, S.-Y.
登録日2017-02-02
公開日2017-09-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Direct observation of conformational population shifts in crystalline human hemoglobin.
J. Biol. Chem., 292, 2017
6LCX
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BU of 6lcx by Molmil
Crosslinked alpha(Ni)-beta(Ni) human hemoglobin A in the T quaternary structure at 95 K: Light
分子名称: BUT-2-ENEDIAL, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
著者Shibayama, N, Park, S.Y, Ohki, M, Sato-Tomita, A.
登録日2019-11-20
公開日2020-02-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Direct observation of ligand migration within human hemoglobin at work.
Proc.Natl.Acad.Sci.USA, 117, 2020
6L5X
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BU of 6l5x by Molmil
Carbonmonoxy human hemoglobin A in the R2 quaternary structure at 95 K: Light (2 min)
分子名称: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
著者Shibayama, N, Park, S.Y, Ohki, M, Sato-Tomita, A.
登録日2019-10-24
公開日2020-02-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Direct observation of ligand migration within human hemoglobin at work.
Proc.Natl.Acad.Sci.USA, 117, 2020
6L5V
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Carbonmonoxy human hemoglobin C in the R quaternary structure at 95 K: Light (2 min)
分子名称: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
著者Shibayama, N, Park, S.Y, Ohki, M, Sato-Tomita, A.
登録日2019-10-24
公開日2020-02-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Direct observation of ligand migration within human hemoglobin at work.
Proc.Natl.Acad.Sci.USA, 117, 2020
4EU2
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BU of 4eu2 by Molmil
Crystal structure of 20s proteasome with novel inhibitor K-7174
分子名称: 1,4-bis[(4E)-5-(3,4,5-trimethoxyphenyl)pent-4-en-1-yl]-1,4-diazepane, Proteasome component C1, Proteasome component C11, ...
著者Kikuchi, J, Shibayama, N, Yamada, S, Wada, T, Nobuyoshi, M, Izumi, T, Akutsu, M, Kano, Y, Ohki, M, Sugiyama, K, Park, S.-Y, Furukawa, Y.
登録日2012-04-25
公開日2013-05-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.509 Å)
主引用文献Homopiperazine derivatives as a novel class of proteasome inhibitors with a unique mode of proteasome binding.
Plos One, 8, 2013
4YUS
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Crystal structure of photoactivated adenylyl cyclase of a cyanobacteriaOscillatoria acuminata in hexagonal form
分子名称: FLAVIN MONONUCLEOTIDE, Family 3 adenylate cyclase
著者Park, S.-Y, Ohki, M, Sugiyama, K, Kawai, F, Iseki, M.
登録日2015-03-19
公開日2016-06-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insight into photoactivation of an adenylate cyclase from a photosynthetic cyanobacterium
Proc.Natl.Acad.Sci.USA, 113, 2016
4YUT
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Crystal structure of photoactivated adenylyl cyclase of a cyanobacteriaOscillatoria acuminata in orthorhombic form
分子名称: FLAVIN MONONUCLEOTIDE, Family 3 adenylate cyclase
著者Park, S.-Y, Ohki, M, Sugiyama, K, Kawai, F, Iseki, M.
登録日2015-03-19
公開日2016-06-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural insight into photoactivation of an adenylate cyclase from a photosynthetic cyanobacterium
Proc.Natl.Acad.Sci.USA, 113, 2016
7FCI
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BU of 7fci by Molmil
human NTCP in complex with YN69083 Fab
分子名称: Fab Heavy chain, Fab Light chain, Sodium/bile acid cotransporter
著者Park, J.H, Iwamoto, M, Yun, J.H, Uchikubo-Kamo, T, Son, D, Jin, Z, Yoshida, H, Ohki, M, Ishimoto, N, Mizutani, K, Oshima, M, Muramatsu, M, Wakita, T, Shirouzu, M, Liu, K, Uemura, T, Nomura, N, Iwata, S, Watashi, K, Tame, J.R.H, Nishizawa, T, Lee, W, Park, S.Y.
登録日2021-07-14
公開日2022-05-25
最終更新日2022-07-13
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural insights into the HBV receptor and bile acid transporter NTCP.
Nature, 606, 2022
6ABA
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BU of 6aba by Molmil
The crystal structure of the photoactivated state of Nonlabens marinus Rhodopsin 3
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Yun, J.-H, Ohki, M, Park, J.-H, Jin, Z, Lee, W, Liu, H, Tame, J.R.H, Shibayama, N, Park, S.-Y.
登録日2018-07-20
公開日2019-07-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.797 Å)
主引用文献The pumping mechanism of NM-R3, a light-driven marine bacterial chloride importer in the rhodopsin family
To Be Published
6AB9
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BU of 6ab9 by Molmil
The crystal structure of the relaxed state of Nonlabens marinus Rhodopsin 3
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Yun, J.-H, Ohki, M, Park, J.-H, Jin, Z, Lee, W, Liu, H, Tame, J.R.H, Shibayama, N, Park, S.-Y.
登録日2018-07-20
公開日2019-07-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The pumping mechanism of NM-R3, a light-driven cyanobacterial chloride importer in the rhodopsin family
To Be Published
6K6I
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BU of 6k6i by Molmil
The crystal structure of light-driven cyanobacterial chloride importer from Mastigocladopsis repens
分子名称: CHLORIDE ION, Cyanobacterial chloride importer, OLEIC ACID, ...
著者Yun, J.H, Park, J.H, Jin, Z, Ohki, M, Wang, Y, Lupala, C.S, Kim, M, Liu, H, Park, S.Y, Lee, W.
登録日2019-06-03
公開日2020-06-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The crystal structure of light-driven cyanobacterial chloride importer from Mastigocladopsis repens
To Be Published
6JYD
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BU of 6jyd by Molmil
Structure of light-state marine bacterial chloride importer, NM-R3, with CW laser (ND-30%) at 95K.
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Yun, J.H, Ohki, M, Park, S.Y, Lee, W.
登録日2019-04-26
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.007 Å)
主引用文献Pumping mechanism of NM-R3, a light-driven bacterial chloride importer in the rhodopsin family.
Sci Adv, 6, 2020
6K6J
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BU of 6k6j by Molmil
The crystal structure of light-driven cyanobacterial chloride importer from Mastigocladopsis repens with Bromide ion
分子名称: BROMIDE ION, Cyanobacterial chloride importer, OLEIC ACID, ...
著者Yun, J.H, Park, J.H, Jin, Z, Ohki, M, Wang, Y, Lupala, C.S, Kim, M, Liu, H, Park, S.Y, Lee, W.
登録日2019-06-03
公開日2020-06-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of light-driven cyanobacterial chloride importer from Mastigocladopsis repens with Bromide ion
To Be Published
6JYA
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BU of 6jya by Molmil
Structure of dark-state marine bacterial chloride importer, NM-R3, with CW laser (ND-10%) at 95K.
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Yun, J.H, Ohki, M, Park, S.Y, Lee, W.
登録日2019-04-26
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.803 Å)
主引用文献Pumping mechanism of NM-R3, a light-driven bacterial chloride importer in the rhodopsin family.
Sci Adv, 6, 2020
6JYF
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BU of 6jyf by Molmil
Structure of light-state marine bacterial chloride importer, NM-R3, with Pulse laser (ND-1%) at 140K.
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Yun, J.H, Ohki, M, Park, S.Y, Lee, W.
登録日2019-04-26
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.004 Å)
主引用文献Pumping mechanism of NM-R3, a light-driven bacterial chloride importer in the rhodopsin family.
Sci Adv, 6, 2020
6JYE
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BU of 6jye by Molmil
Structure of dark-state marine bacterial chloride importer, NM-R3, with Pulse laser (ND-1%) at 140K.
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Yun, J.H, Ohki, M, Park, S.Y, Lee, W.
登録日2019-04-26
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Pumping mechanism of NM-R3, a light-driven bacterial chloride importer in the rhodopsin family.
Sci Adv, 6, 2020
6JYB
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BU of 6jyb by Molmil
Structure of light-state marine bacterial chloride importer, NM-R3, with CW laser (ND-10%) at 95K.
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Yun, J.H, Ohki, M, Park, S.Y, Lee, W.
登録日2019-04-26
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Pumping mechanism of NM-R3, a light-driven bacterial chloride importer in the rhodopsin family.
Sci Adv, 6, 2020

 

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