5IKY
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5IKZ
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5XU6
| Crystal structure of inositol 1,3,4,5,6-pentakisphosphate 2-kinase (IPK1) from Cryptococcus neoformans | 分子名称: | Inositol-pentakisphosphate 2-kinase, SULFATE ION | 著者 | Oh, J, Rhee, S. | 登録日 | 2017-06-22 | 公開日 | 2017-10-04 | 最終更新日 | 2017-11-29 | 実験手法 | X-RAY DIFFRACTION (2.35 Å) | 主引用文献 | Crystal structure of inositol 1,3,4,5,6-pentakisphosphate 2-kinase from Cryptococcus neoformans. J. Struct. Biol., 200, 2017
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4NNC
| Ternary complex of ObcA with C4-CoA adduct and oxalate | 分子名称: | (3S)-3-[2-[3-[[(2R)-4-[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethylsulfanyl]-3-oxidanyl-butanoic acid, COBALT (II) ION, OBCA, ... | 著者 | Oh, J.T, Goo, E, Hwang, I, Rhee, S. | 登録日 | 2013-11-17 | 公開日 | 2014-03-19 | 最終更新日 | 2023-09-20 | 実験手法 | X-RAY DIFFRACTION (2.279 Å) | 主引用文献 | Structural Basis for Bacterial Quorum Sensing-mediated Oxalogenesis. J.Biol.Chem., 289, 2014
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2Q7F
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5Z5M
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8SY6
| E. coli DNA-directed RNA polymerase transcription elongation complex bound the unnatural dB-UTP base pair in the active site | 分子名称: | 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... | 著者 | Shan, Z, Lyumkis, D, Oh, J, Wang, D. | 登録日 | 2023-05-24 | 公開日 | 2023-12-27 | 最終更新日 | 2024-05-29 | 実験手法 | ELECTRON MICROSCOPY (3.28 Å) | 主引用文献 | A unified Watson-Crick geometry drives transcription of six-letter expanded DNA alphabets by E. coli RNA polymerase. Nat Commun, 14, 2023
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8SY7
| E. coli DNA-directed RNA polymerase transcription elongation complex bound the unnatural dB-STP base pair in the active site | 分子名称: | DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... | 著者 | Shan, Z, Lyumkis, D, Oh, J, Wang, D. | 登録日 | 2023-05-24 | 公開日 | 2023-12-27 | 実験手法 | ELECTRON MICROSCOPY (2.65 Å) | 主引用文献 | A unified Watson-Crick geometry drives transcription of six-letter expanded DNA alphabets by E. coli RNA polymerase. Nat Commun, 14, 2023
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8SY5
| E. coli DNA-directed RNA polymerase transcription elongation complex bound the unnatural dS-BTP base pair in the active site | 分子名称: | 2-oxo-2-hydroadenosine 5'-(tetrahydrogen triphosphate), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... | 著者 | Shan, Z, Lyumkis, D, Oh, J, Wang, D. | 登録日 | 2023-05-24 | 公開日 | 2023-12-27 | 実験手法 | ELECTRON MICROSCOPY (2.7 Å) | 主引用文献 | A unified Watson-Crick geometry drives transcription of six-letter expanded DNA alphabets by E. coli RNA polymerase. Nat Commun, 14, 2023
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8TXO
| E. coli DNA-directed RNA polymerase transcription elongation complex bound to the unnatural dZ-PTP base pair in the active site | 分子名称: | DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... | 著者 | Aiyer, S, Shan, Z, Oh, J, Wang, D, Tan, Y.Z, Lyumkis, D. | 登録日 | 2023-08-23 | 公開日 | 2024-01-24 | 実験手法 | ELECTRON MICROSCOPY (3.1 Å) | 主引用文献 | Overcoming resolution attenuation during tilted cryo-EM data collection. Nat Commun, 15, 2024
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8UKR
| RNA polymerase II elongation complex with Fapy-dG lesion soaking with ATP before chemistry | 分子名称: | ADENOSINE-5'-TRIPHOSPHATE, DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ... | 著者 | Hou, P, Oh, J, Wang, D. | 登録日 | 2023-10-15 | 公開日 | 2024-04-24 | 実験手法 | X-RAY DIFFRACTION (3.78 Å) | 主引用文献 | Molecular Mechanism of RNA Polymerase II Transcriptional Mutagenesis by the Epimerizable DNA Lesion, Fapy·dG. J.Am.Chem.Soc., 146, 2024
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8UKU
| RNA polymerase II elongation complex with Fapy-dG lesion with CMP added | 分子名称: | DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... | 著者 | Hou, P, Oh, J, Wang, D. | 登録日 | 2023-10-15 | 公開日 | 2024-04-24 | 実験手法 | X-RAY DIFFRACTION (3.6 Å) | 主引用文献 | Molecular Mechanism of RNA Polymerase II Transcriptional Mutagenesis by the Epimerizable DNA Lesion, Fapy·dG. J.Am.Chem.Soc., 146, 2024
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8UKT
| RNA polymerase II elongation complex with Fapy-dG lesion with AMP added | 分子名称: | DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... | 著者 | Hou, P, Oh, J, Wang, D. | 登録日 | 2023-10-15 | 公開日 | 2024-04-24 | 実験手法 | X-RAY DIFFRACTION (3.6 Å) | 主引用文献 | Molecular Mechanism of RNA Polymerase II Transcriptional Mutagenesis by the Epimerizable DNA Lesion, Fapy·dG. J.Am.Chem.Soc., 146, 2024
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8UKQ
| RNA polymerase II elongation complex with Fapy-dG lesion in apo state | 分子名称: | DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... | 著者 | Hou, P, Oh, J, Wang, D. | 登録日 | 2023-10-15 | 公開日 | 2024-04-24 | 実験手法 | X-RAY DIFFRACTION (3.5 Å) | 主引用文献 | Molecular Mechanism of RNA Polymerase II Transcriptional Mutagenesis by the Epimerizable DNA Lesion, Fapy·dG. J.Am.Chem.Soc., 146, 2024
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8UKS
| RNA polymerase II elongation complex with Fapy-dG lesion soaking with CTP before chemistry | 分子名称: | CYTIDINE-5'-TRIPHOSPHATE, DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ... | 著者 | Hou, P, Oh, J, Wang, D. | 登録日 | 2023-10-15 | 公開日 | 2024-04-24 | 実験手法 | X-RAY DIFFRACTION (3.4 Å) | 主引用文献 | Molecular Mechanism of RNA Polymerase II Transcriptional Mutagenesis by the Epimerizable DNA Lesion, Fapy·dG. J.Am.Chem.Soc., 146, 2024
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2C7B
| The Crystal Structure of EstE1, a New Thermophilic and Thermostable Carboxylesterase Cloned from a Metagenomic Library | 分子名称: | CARBOXYLESTERASE | 著者 | Byun, J.-S, Rhee, J.-K, Kim, D.-U, Oh, J.-W, Cho, H.-S. | 登録日 | 2005-11-21 | 公開日 | 2005-12-01 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Crystal Structure of Hyperthermophilic Esterase Este1 and the Relationship between its Dimerization and Thermostability Properties. Bmc Struct.Biol., 7, 2007
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2E2E
| TPR domain of NrfG mediates the complex formation between heme lyase and formate-dependent nitrite reductase in Escherichia Coli O157:H7 | 分子名称: | BETA-MERCAPTOETHANOL, Formate-dependent nitrite reductase complex nrfG subunit, IMIDAZOLE | 著者 | Han, D, Kim, K, Oh, J, Park, J, Kim, Y. | 登録日 | 2006-11-11 | 公開日 | 2007-10-23 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.05 Å) | 主引用文献 | TPR domain of NrfG mediates complex formation between heme lyase and formate-dependent nitrite reductase in Escherichia coli O157:H7. Proteins, 70, 2008
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6ILT
| Structure of Arabidopsis thaliana Ribokinase complexed with ATP and Magnesium ion | 分子名称: | ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Ribokinase, ... | 著者 | Kang, P, Oh, J, Rhee, S. | 登録日 | 2018-10-19 | 公開日 | 2019-03-13 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Crystal structure and mutational analyses of ribokinase from Arabidopsis thaliana. J. Struct. Biol., 206, 2019
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6ILR
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6ILS
| Structure of Arabidopsis thaliana Ribokinase complexed with Ribose and ATP | 分子名称: | ADENOSINE-5'-TRIPHOSPHATE, Ribokinase, SODIUM ION, ... | 著者 | Kang, P, Oh, J, Rhee, S. | 登録日 | 2018-10-19 | 公開日 | 2019-03-13 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Crystal structure and mutational analyses of ribokinase from Arabidopsis thaliana. J. Struct. Biol., 206, 2019
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2PL2
| Crystal structure of TTC0263: a thermophilic TPR protein in Thermus thermophilus HB27 | 分子名称: | Hypothetical conserved protein TTC0263 | 著者 | Lim, H, Kim, K, Han, D, Oh, J. | 登録日 | 2007-04-18 | 公開日 | 2008-03-04 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Crystal structure of TTC0263, a thermophilic TPR protein from Thermus thermophilus HB27. Mol.Cell, 24, 2007
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