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PDB: 7397 results

1ZYK
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BU of 1zyk by Molmil
Anthranilate Phosphoribosyltransferase in complex with PRPP, anthranilate and magnesium
Descriptor: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, 2-AMINOBENZOIC ACID, Anthranilate phosphoribosyltransferase, ...
Authors:Marino, M, Deuss, M, Sterner, R, Mayans, O.
Deposit date:2005-06-10
Release date:2006-05-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and mutational analysis of substrate complexation by anthranilate phosphoribosyltransferase from Sulfolobus solfataricus.
J.Biol.Chem., 281, 2006
2FLH
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BU of 2flh by Molmil
Crystal structure of cytokinin-specific binding protein from mung bean in complex with cytokinin
Descriptor: (2E)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol, SODIUM ION, cytokinin-specific binding protein
Authors:Pasternak, O, Bujacz, G.D, Sikorski, M.M, Jaskolski, M.
Deposit date:2006-01-06
Release date:2006-11-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal Structure of Vigna radiata Cytokinin-Specific Binding Protein in Complex with Zeatin.
Plant Cell, 18, 2006
1BPH
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BU of 1bph by Molmil
CONFORMATIONAL CHANGES IN CUBIC INSULIN CRYSTALS IN THE PH RANGE 7-11
Descriptor: 1,2-DICHLOROETHANE, INSULIN A CHAIN (PH 9), INSULIN B CHAIN (PH 9), ...
Authors:Gursky, O, Badger, J, Li, Y, Caspar, D.L.D.
Deposit date:1992-10-30
Release date:1993-01-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformational changes in cubic insulin crystals in the pH range 7-11.
Biophys.J., 63, 1992
5TR3
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BU of 5tr3 by Molmil
2.5 Angstrom Resolution Crystal Structure of Dihydrolipoyl Dehydrogenase from Pseudomonas putida in Complex with FAD.
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Dihydrolipoyl dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Minasov, G, Wawrzak, Z, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Grimshaw, S, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-10-25
Release date:2016-11-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:2.5 Angstrom Resolution Crystal Structure of Dihydrolipoyl Dehydrogenase from Pseudomonas putida in Complex with FAD.
To Be Published
5TRE
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BU of 5tre by Molmil
Zinc and the Iron Donor Frataxin Regulate Oligomerization of the Scaffold Protein to Form New Fe-S Cluster Assembly Centers
Descriptor: Frataxin homolog, mitochondrial, Iron sulfur cluster assembly protein 1
Authors:Ranatunga, W, Gakh, O, Galeano, B.K, Smith IV, D.Y, Thompson, J.R, Isaya, G.
Deposit date:2016-10-26
Release date:2017-06-07
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (15.6 Å)
Cite:Zinc and the iron donor frataxin regulate oligomerization of the scaffold protein to form new Fe-S cluster assembly centers.
Metallomics, 9, 2017
7KZX
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BU of 7kzx by Molmil
Cryo-EM structure of YiiP-Fab complex in Apo state
Descriptor: Cadmium and zinc efflux pump FieF, Fab2R heavy chain, Fab2R light chain
Authors:Lopez-Redondo, M.L, Fan, S, Koide, A, Koide, S, Beckstein, O, Stokes, D.L.
Deposit date:2020-12-10
Release date:2021-01-06
Last modified:2021-07-28
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Zinc binding alters the conformational dynamics and drives the transport cycle of the cation diffusion facilitator YiiP.
J.Gen.Physiol., 153, 2021
5TSE
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BU of 5tse by Molmil
2.35 Angstrom Crystal Structure Minor Lipoprotein from Acinetobacter baumannii.
Descriptor: FORMIC ACID, LPS-assembly lipoprotein LptE
Authors:Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Grimshaw, S, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-10-28
Release date:2016-11-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:2.35 Angstrom Crystal Structure Minor Lipoprotein from Acinetobacter baumannii.
To Be Published
5U0D
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BU of 5u0d by Molmil
Identification of a New Zinc Binding Chemotype by Fragment Screening
Descriptor: (5R)-5-(2,4-dimethoxyphenyl)-2-sulfanylidene-1,3-oxazolidin-4-one, Carbonic anhydrase 2, GLYCEROL, ...
Authors:Peat, T.S, Poulsen, S.A, Ren, B, Dolezal, O, Woods, L.A, Mujumdar, P, Chrysanthopoulos, P.K.
Deposit date:2016-11-23
Release date:2017-08-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Identification of a New Zinc Binding Chemotype by Fragment Screening.
J. Med. Chem., 60, 2017
7KZZ
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BU of 7kzz by Molmil
Cryo-EM structure of YiiP-Fab complex in Holo state
Descriptor: Cadmium and zinc efflux pump FieF, Fab2R heavy chain, Fab2R light chain, ...
Authors:Lopez-Redondo, M.L, Fan, S, Koide, A, Koide, S, Beckstein, O, Stokes, D.L.
Deposit date:2020-12-10
Release date:2021-01-06
Last modified:2021-07-28
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Zinc binding alters the conformational dynamics and drives the transport cycle of the cation diffusion facilitator YiiP.
J.Gen.Physiol., 153, 2021
3KBC
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BU of 3kbc by Molmil
Crystal structure of GltPh K55C-A364C mutant crosslinked with divalent mercury
Descriptor: 425aa long hypothetical proton glutamate symport protein, ASPARTIC ACID, MERCURY (II) ION, ...
Authors:Reyes, N, Ginter, C, Boudker, O.
Deposit date:2009-10-20
Release date:2009-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.51 Å)
Cite:Transport mechanism of a bacterial homologue of glutamate transporters.
Nature, 462, 2009
5U8T
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BU of 5u8t by Molmil
Structure of Eukaryotic CMG Helicase at a Replication Fork and Implications
Descriptor: Cell division control protein 45, DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA replication complex GINS protein PSF1, ...
Authors:Li, B, Georgescu, R, Yuan, Z, Santos, R, Sun, J, Zhang, D, Yurieva, O, Li, H, O'Donnell, M.E.
Deposit date:2016-12-15
Release date:2017-02-08
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Structure of eukaryotic CMG helicase at a replication fork and implications to replisome architecture and origin initiation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5TR7
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BU of 5tr7 by Molmil
Crystal structure of a putative D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae O1 biovar eltor str. N16961
Descriptor: D-alanyl-D-alanine carboxypeptidase, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Filippova, E.V, Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Shatsman, S, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-10-25
Release date:2016-11-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of a putative D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae O1 biovar eltor str. N16961
To Be Published
5UBD
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BU of 5ubd by Molmil
Crystal structure of the N-terminal domain (domain 1) of RctB, RctB-1-124-L48M
Descriptor: RctB replication initiator protein
Authors:Orlova, N, Ivashkiv, O, Waldor, M.K, Jeruzalmi, D.
Deposit date:2016-12-20
Release date:2017-01-11
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:The replication initiator of the cholera pathogen's second chromosome shows structural similarity to plasmid initiators.
Nucleic Acids Res., 45, 2017
5TY8
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BU of 5ty8 by Molmil
Identification of a New Zinc Binding Chemotype by Fragment Screening
Descriptor: (5R)-5-phenyl-1,3-oxazolidine-2,4-dione, Carbonic anhydrase 2, ZINC ION
Authors:Peat, T.S, Poulsen, S.A, Ren, B, Dolezal, O, Woods, L.A, Mujumdar, P, Chrysanthopoulos, P.K.
Deposit date:2016-11-18
Release date:2017-08-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Identification of a New Zinc Binding Chemotype by Fragment Screening.
J. Med. Chem., 60, 2017
1BVT
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BU of 1bvt by Molmil
METALLO-BETA-LACTAMASE FROM BACILLUS CEREUS 569/H/9
Descriptor: BICARBONATE ION, PROTEIN (BETA-LACTAMASE), ZINC ION
Authors:Carfi, A, Duee, E, Dideberg, O.
Deposit date:1998-09-18
Release date:1998-09-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:1.85 A resolution structure of the zinc (II) beta-lactamase from Bacillus cereus.
Acta Crystallogr.,Sect.D, 54, 1998
3KBO
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BU of 3kbo by Molmil
2.14 Angstrom Crystal Structure of Putative Oxidoreductase (ycdW) from Salmonella typhimurium in Complex with NADP
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, Glyoxylate/hydroxypyruvate reductase A, ...
Authors:Minasov, G, Wawrzak, Z, Skarina, T, Onopriyenko, O, Papazisi, L, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-10-20
Release date:2009-10-27
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:2.14 Angstrom Crystal Structure of Putative Oxidoreductase (ycdW) from Salmonella typhimurium in Complex with NADP.
To be Published
3KZF
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BU of 3kzf by Molmil
Structure of Giardia Carbamate Kinase
Descriptor: Carbamate kinase, GLYCEROL
Authors:Galkin, A, Herzberg, O.
Deposit date:2009-12-08
Release date:2010-04-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:X-ray structure and characterization of carbamate kinase from the human parasite Giardia lamblia.
Acta Crystallogr.,Sect.F, 66, 2010
5TP0
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BU of 5tp0 by Molmil
Human mesotrypsin in complex with diminazene
Descriptor: BERENIL, CALCIUM ION, SULFATE ION, ...
Authors:Kayode, O, Soares, A, Radisky, E.S.
Deposit date:2016-10-19
Release date:2017-05-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Small molecule inhibitors of mesotrypsin from a structure-based docking screen.
PLoS ONE, 12, 2017
5TRO
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BU of 5tro by Molmil
1.8 Angstrom Resolution Crystal Structure of Dimerization and Transpeptidase domains (residues 39-608) of Penicillin-Binding Protein 1 from Staphylococcus aureus.
Descriptor: CHLORIDE ION, Penicillin-binding protein 1
Authors:Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Grimshaw, S, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-10-26
Release date:2016-11-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:1.8 Angstrom Resolution Crystal Structure of Dimerization and Transpeptidase domains (residues 39-608) of Penicillin-Binding Protein 1 from Staphylococcus aureus.
To Be Published
3KIH
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BU of 3kih by Molmil
The crystal structures of two fragments truncated from 5-bladed beta-propeller lectin, tachylectin-2 (Lib2-D2-15)
Descriptor: 2-(acetylamido)-2-deoxy-D-glucono-1,5-lactone, 5-bladed beta-propeller lectin
Authors:Dym, O, Tawfik, D.S, Yadid, I, Israel Structural Proteomics Center (ISPC)
Deposit date:2009-11-02
Release date:2010-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Metamorphic proteins mediate evolutionary transitions of structure
Proc.Natl.Acad.Sci.USA, 107, 2010
1CPH
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BU of 1cph by Molmil
CONFORMATIONAL CHANGES IN CUBIC INSULIN CRYSTALS IN THE PH RANGE 7-11
Descriptor: 1,2-DICHLOROETHANE, INSULIN (PH 10), SODIUM ION
Authors:Gursky, O, Badger, J, Li, Y, Caspar, D.L.D.
Deposit date:1992-10-30
Release date:1993-01-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Conformational changes in cubic insulin crystals in the pH range 7-11.
Biophys.J., 63, 1992
5U4H
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BU of 5u4h by Molmil
1.05 Angstrom Resolution Crystal Structure of UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Acinetobacter baumannii in Covalently Bound Complex with (2R)-2-(phosphonooxy)propanoic Acid.
Descriptor: (2R)-2-(phosphonooxy)propanoic acid, FORMIC ACID, SODIUM ION, ...
Authors:Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Grimshaw, S, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-12-04
Release date:2016-12-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:1.05 Angstrom Resolution Crystal Structure of UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Acinetobacter baumannii in Covalently Bound Complex with (2R)-2-(phosphonooxy)propanoic Acid.
To Be Published
3KHH
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BU of 3khh by Molmil
Dpo4 extension ternary complex with a C base opposite the 2-aminofluorene-guanine [AF]G lesion
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 2-AMINOFLUORENE, 5'-D(*CP*CP*TP*A*AP*CP*GP*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', ...
Authors:Rechkoblit, O, Malinina, L, Patel, D.J.
Deposit date:2009-10-30
Release date:2010-02-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Mechanism of error-free and semitargeted mutagenic bypass of an aromatic amine lesion by Y-family polymerase Dpo4.
Nat.Struct.Mol.Biol., 17, 2010
3KIF
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BU of 3kif by Molmil
The crystal structures of two fragments truncated from 5-bladed beta-propeller lectin, tachylectin-2 (Lib1-B7-18 and Lib2-D2-15)
Descriptor: 2-(acetylamido)-2-deoxy-D-glucono-1,5-lactone, 5-bladed beta-propeller lectin, SULFATE ION
Authors:Dym, O, Tawfik, D.S, Yadid, I, Israel Structural Proteomics Center (ISPC)
Deposit date:2009-11-02
Release date:2010-04-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Metamorphic proteins mediate evolutionary transitions of structure
Proc.Natl.Acad.Sci.USA, 107, 2010
3KKU
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BU of 3kku by Molmil
Cruzain in complex with a non-covalent ligand
Descriptor: 1,2-ETHANEDIOL, Cruzipain, N-[2-(1H-benzimidazol-2-yl)ethyl]-2-(2-bromophenoxy)acetamide, ...
Authors:Ferreira, R.S, Eidam, O, Shoichet, B.K.
Deposit date:2009-11-06
Release date:2010-07-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Complementarity between a docking and a high-throughput screen in discovering new cruzain inhibitors.
J.Med.Chem., 53, 2010

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