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PDB: 7397 results

3HBB
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BU of 3hbb by Molmil
Structures of dihydrofolate reductase-thymidylate synthase of Trypanosoma cruzi in the folate-free state and in complex with two antifolate drugs, trimetrexate and methotrexate
Descriptor: 1,2-ETHANEDIOL, Dihydrofolate reductase-thymidylate synthase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Schormann, N, Senkovich, O, Chattopadhyay, D.
Deposit date:2009-05-04
Release date:2009-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of dihydrofolate reductase-thymidylate synthase of Trypanosoma cruzi in the folate-free state and in complex with two antifolate drugs, trimetrexate and methotrexate.
Acta Crystallogr.,Sect.D, 65, 2009
3HFU
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BU of 3hfu by Molmil
Crystal structure of the ligand binding domain of E. coli CynR with its specific effector azide
Descriptor: 1,2-ETHANEDIOL, AZIDE ION, HTH-type transcriptional regulator cynR
Authors:Singer, A.U, Evdokimova, E, Kagan, O, Dong, A, Edwards, A.M, Savchenko, A.
Deposit date:2009-05-12
Release date:2009-06-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the ligand binding domain of E. coli CynR with its specific effector azide
TO BE PUBLISHED
1KXG
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BU of 1kxg by Molmil
The 2.0 Ang Resolution Structure of BLyS, B Lymphocyte Stimulator.
Descriptor: 1,4-DIETHYLENE DIOXIDE, B lymphocyte stimulator, CITRIC ACID, ...
Authors:Oren, D.A, Li, Y, Volovik, Y, Morris, T.S, Dharia, C, Das, K, Galperina, O, Gentz, R, Arnold, E.
Deposit date:2002-01-31
Release date:2002-03-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of BLyS receptor recognition.
Nat.Struct.Biol., 9, 2002
3HFR
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BU of 3hfr by Molmil
Crystal structure of glutamate racemase from Listeria monocytogenes
Descriptor: CHLORIDE ION, Glutamate racemase, O-(O-(2-AMINOPROPYL)-O'-(2-METHOXYETHYL)POLYPROPYLENE GLYCOL 500)
Authors:Majorek, K.A, Chruszcz, M, Zimmerman, M.D, Klimecka, M.M, Cymborowski, M, Skarina, T, Onopriyenko, O, Stam, J, Otwinowski, Z, Anderson, W.F, Savchenko, A, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-05-12
Release date:2009-06-09
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of glutamate racemase from Listeria monocytogenes
TO BE PUBLISHED
6F2F
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BU of 6f2f by Molmil
Crystal structure of Protease 1 from Pyrococcus Horikoshii co-cystallized in presence of 10 mM Tb-Xo4 and ammonium sulfate.
Descriptor: Deglycase PH1704, Dihydroxyacetone, SULFATE ION, ...
Authors:Engilberge, S, Riobe, F, Di Pietro, S, Franzetti, B, Girard, E, Dumont, E, Maury, O.
Deposit date:2017-11-24
Release date:2018-10-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Unveiling the Binding Modes of the Crystallophore, a Terbium-based Nucleating and Phasing Molecular Agent for Protein Crystallography.
Chemistry, 24, 2018
4C67
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Discovery of Epigenetic Regulator I-BET762: Lead Optimization to Afford a Clinical Candidate Inhibitor of the BET Bromodomains
Descriptor: 1,2-ETHANEDIOL, 13-methyl-7-phenyl-3-thia-1,8,11,12-tetraazatricyclo trideca-2(6),4,7,10,12-pentaene, BROMODOMAIN-CONTAINING PROTEIN 4
Authors:Chung, C, Mirguet, O.
Deposit date:2013-09-17
Release date:2013-10-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Discovery of Epigenetic Regulator I-Bet762: Lead Optimization to Afford a Clinical Candidate Inhibitor of the Bet Bromodomains.
J.Med.Chem., 56, 2013
3HE6
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Crystal structure of mouse CD1d-alpha-galactosylceramide with mouse Valpha14-Vbeta8.2 NKT TCR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
Authors:Patel, O, Rossjohn, J.
Deposit date:2009-05-07
Release date:2009-07-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Differential recognition of CD1d-alpha-galactosyl ceramide by the V beta 8.2 and V beta 7 semi-invariant NKT T cell receptors
Immunity, 31, 2009
1KO2
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VIM-2, a Zn-beta-lactamase from Pseudomonas aeruginosa with an oxidized Cys (cysteinesulfonic)
Descriptor: ACETATE ION, VIM-2 metallo-beta-lactamase, ZINC ION
Authors:Garcia-Saez, I, Docquier, J.-D, Rossolini, G.M, Dideberg, O.
Deposit date:2001-12-20
Release date:2003-09-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The three-dimensional structure of VIM-2, a Zn-beta-lactamase from Pseudomonas aeruginosa in its reduced and oxidised form
J.Mol.Biol., 375, 2008
3HJ7
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BU of 3hj7 by Molmil
Crystal structure of TILS C-terminal domain
Descriptor: CHLORIDE ION, tRNA(Ile)-lysidine synthase
Authors:Nakanishi, K, Bonnefond, L, Kimura, S, Suzuki, T, Ishitani, R, Nureki, O.
Deposit date:2009-05-21
Release date:2009-10-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for translational fidelity ensured by transfer RNA lysidine synthetase.
Nature, 461, 2009
1KTV
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BU of 1ktv by Molmil
Crystal Structure of Elongation Factor G Dimer Without Nucleotide
Descriptor: ELONGATION FACTOR G
Authors:Laurberg, M, Kristensen, O, Su, X.D, Liljas, A.
Deposit date:2002-01-17
Release date:2003-12-23
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:A New Crystal Form of Thermus thermophilus Elongation Factor G Indicates Crystallographic Limitations Imposed on Molecular Flexibility
To be Published
6F2J
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BU of 6f2j by Molmil
Crystal structure of Hen Egg-White Lysozyme co-crystallized in presence of 100 mM Tb-Xo4 and 100 mM sodium sulfate
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION, ...
Authors:Engilberge, S, Riobe, F, Di Pietro, S, Girard, E, Dumont, E, Maury, O.
Deposit date:2017-11-24
Release date:2018-10-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Unveiling the Binding Modes of the Crystallophore, a Terbium-based Nucleating and Phasing Molecular Agent for Protein Crystallography.
Chemistry, 24, 2018
6FEA
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BU of 6fea by Molmil
A. vinelandii vanadium nitrogenase, turnover state
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CARBONATE ION, FE(8)-S(7) CLUSTER, ...
Authors:Sippel, D, Einsle, O.
Deposit date:2017-12-31
Release date:2018-03-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:A bound reaction intermediate sheds light on the mechanism of nitrogenase.
Science, 359, 2018
6F5D
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BU of 6f5d by Molmil
Trypanosoma brucei F1-ATPase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP synthase gamma subunit, ATP synthase subunit alpha, ...
Authors:Montgomery, M.G, Gahura, O, Leslie, A.G.W, Zikova, A, Walker, J.E.
Deposit date:2017-12-01
Release date:2018-02-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:ATP synthase fromTrypanosoma bruceihas an elaborated canonical F1-domain and conventional catalytic sites.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3HIM
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BU of 3him by Molmil
The Crystal Structure of a Bacterial Regulatory Protein in the tetR Family from Rhodococcus RHA1 to 2.2A
Descriptor: Probable transcriptional regulator
Authors:Stein, A.J, Binkowski, T.A, Evdokimova, E, Kagan, O, Edwards, A, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-05-20
Release date:2009-05-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Crystal Structure of a Bacterial Regulatory Protein in the tetR Family from Rhodococcus RHA1 to 2.2A
To be Published
6ET9
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BU of 6et9 by Molmil
Structure of the acetoacetyl-CoA-thiolase/HMG-CoA-synthase complex from Methanothermococcus thermolithotrophicus at 2.75 A
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Acetyl-CoA acetyltransferase thiolase, CHLORIDE ION, ...
Authors:Engilberge, S, Voegeli, B, Girard, E, Riobe, F, Maury, O, Erb, T.J, Shima, S, Wagner, T.
Deposit date:2017-10-25
Release date:2018-03-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Archaeal acetoacetyl-CoA thiolase/HMG-CoA synthase complex channels the intermediate via a fused CoA-binding site.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1M4P
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BU of 1m4p by Molmil
Structure of the Tsg101 UEV domain in complex with a HIV-1 PTAP "late domain" peptide, DYANA Ensemble
Descriptor: Gag Polyprotein, Tumor Susceptibility gene 101 protein
Authors:Pornillos, O, Alam, S.L, Davis, D.R, Sundquist, W.I.
Deposit date:2002-07-03
Release date:2002-11-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of the Tsg101 UEV domain in complex with the PTAP motif of the HIV-1 p6 protein
Nat.Struct.Biol., 9, 2002
1M85
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BU of 1m85 by Molmil
Structure of Proteus mirabilis catalase for the native form
Descriptor: GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ...
Authors:Gouet, P, Jouve, H.-M, Dideberg, O.
Deposit date:2002-07-24
Release date:2002-08-14
Last modified:2014-04-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Proteus mirabilis PR catalase with and without bound NADPH.
J.Mol.Biol., 249, 1995
3IED
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BU of 3ied by Molmil
Crystal structure of N-terminal domain of Plasmodium falciparum Hsp90 (PF14_0417) in complex with AMPPN
Descriptor: AMP PHOSPHORAMIDATE, Heat shock protein
Authors:Pizarro, J.C, Wernimont, A.K, Lew, J, Hutchinson, A, Artz, J.D, Amaya, M.F, Plotnikova, O, Vedadi, M, Kozieradzki, I, Weigelt, J, Edwards, A.M, Arrowsmith, C.H, Bountra, C, Botchkarev, A, Hui, R, Hills, T, Structural Genomics Consortium (SGC)
Deposit date:2009-07-22
Release date:2009-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal structure of N-terminal domain of Plasmodium falciparum Hsp90 (PF14_0417) in complex with AMPPN
TO BE PUBLISHED
1HO2
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BU of 1ho2 by Molmil
NMR STRUCTURE OF THE POTASSIUM CHANNEL FRAGMENT L45 IN MICELLES
Descriptor: VOLTAGE-GATED POTASSIUM CHANNEL PROTEIN
Authors:Ohlenschlager, O, Hojo, H, Ramachandran, R, Gorlach, M, Haris, P.I.
Deposit date:2000-12-08
Release date:2002-06-05
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Three-dimensional structure of the S4-S5 segment of the Shaker potassium channel.
Biophys.J., 82, 2002
6F2H
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BU of 6f2h by Molmil
Structure of Protease 1 from Pyrococcus horikoshii co-crystallized in presence of 10 mM Tb-Xo4 and potassium iodide.
Descriptor: Deglycase PH1704, IODIDE ION, TERBIUM(III) ION, ...
Authors:Engilberge, S, Riobe, F, Di Pietro, S, Franzetti, B, Girard, E, Dumont, E, Maury, O.
Deposit date:2017-11-24
Release date:2018-10-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Unveiling the Binding Modes of the Crystallophore, a Terbium-based Nucleating and Phasing Molecular Agent for Protein Crystallography.
Chemistry, 24, 2018
3IGK
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BU of 3igk by Molmil
Diversity in DNA recognition by p53 revealed by crystal structures with Hoogsteen base pairs (p53-DNA complex 2)
Descriptor: Cellular tumor antigen p53, DNA (5'-D(*CP*GP*GP*GP*CP*AP*TP*GP*CP*CP*CP*G)-3'), ZINC ION
Authors:Suad, O, Rabinovich, D, Rozenberg, H, Shakked, Z.
Deposit date:2009-07-28
Release date:2010-03-31
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Diversity in DNA recognition by p53 revealed by crystal structures with Hoogsteen base pairs
Nat.Struct.Mol.Biol., 17, 2010
6F58
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Crystal structure of human Brachyury (T) in complex with DNA
Descriptor: Brachyury protein, DNA (5'-D(*AP*AP*TP*TP*TP*CP*AP*CP*AP*CP*CP*TP*AP*GP*GP*TP*GP*TP*GP*AP*AP*AP*TP*T)-3'), SODIUM ION
Authors:Newman, J.A, Gavard, A.E, Krojer, T, Shrestha, L, Burgess-Brown, N.A, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Gileadi, O.
Deposit date:2017-12-01
Release date:2017-12-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.253 Å)
Cite:Crystal structure of human Brachyury (T) in complex with DNA
To Be Published
1HUY
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BU of 1huy by Molmil
CRYSTAL STRUCTURE OF CITRINE, AN IMPROVED YELLOW VARIANT OF GREEN FLUORESCENT PROTEIN
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Griesbeck, O, Baird, G.S, Campbell, R.E, Zacharias, D.A, Tsien, R.Y.
Deposit date:2001-01-04
Release date:2001-07-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Reducing the environmental sensitivity of yellow fluorescent protein. Mechanism and applications
J.Biol.Chem., 276, 2001
3IMI
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BU of 3imi by Molmil
2.01 Angstrom resolution crystal structure of a HIT family protein from Bacillus anthracis str. 'Ames Ancestor'
Descriptor: HIT family protein, SULFATE ION, ZINC ION
Authors:Halavaty, A.S, Wawrzak, Z, Skarina, T, Onopriyenko, O, Gordon, E, Papazisi, L, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-08-10
Release date:2009-08-18
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:2.01 Angstrom resolution crystal structure of a HIT family protein from Bacillus anthracis str. 'Ames Ancestor'
To be Published
1M2A
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BU of 1m2a by Molmil
Crystal structure at 1.5 Angstroms resolution of the wild type thioredoxin-like [2Fe-2S] ferredoxin from Aquifex aeolicus
Descriptor: FE2/S2 (INORGANIC) CLUSTER, SULFATE ION, ZINC ION, ...
Authors:Yeh, A.P, Ambroggio, X.I, Andrade, S.L.A, Einsle, O, Chatelet, C, Meyer, J, Rees, D.C.
Deposit date:2002-06-22
Release date:2002-09-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High-resolution crystal structures of the wild type and Cys-55-->Ser and Cys-59-->Ser variants of the thioredoxin-like [2Fe-2S] ferredoxin from Aquifex aeolicus
J.Biol.Chem., 277, 2002

223532

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