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PDB: 62 results

3VGO
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BU of 3vgo by Molmil
Crystal structure of the N-terminal fragment of Cbl-b
Descriptor: E3 ubiquitin-protein ligase CBL-B
Authors:Kobashigawa, Y, Noda, N.N, Inagaki, F.
Deposit date:2011-08-18
Release date:2011-12-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Autoinhibition and phosphorylation-induced activation mechanisms of human cancer and autoimmune disease-related E3 protein Cbl-b
Proc.Natl.Acad.Sci.USA, 108, 2011
3VX7
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BU of 3vx7 by Molmil
Crystal structure of Kluyveromyces marxianus Atg7NTD-Atg10 complex
Descriptor: E1, E2
Authors:Yamaguchi, M, Matoba, K, Sawada, R, Fujioka, Y, Nakatogawa, H, Yamamoto, H, Kobashigawa, Y, Hoshida, H, Akada, R, Ohsumi, Y, Noda, N.N, Inagaki, F.
Deposit date:2012-09-11
Release date:2012-11-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Noncanonical recognition and UBL loading of distinct E2s by autophagy-essential Atg7.
Nat.Struct.Mol.Biol., 19, 2012
7VED
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BU of 7ved by Molmil
Crystal structure of GABARAP fused to TEX264 LIR with S272D mutation
Descriptor: SULFATE ION, Testis-expressed protein 264,Gamma-aminobutyric acid receptor-associated protein
Authors:Yamasaki, A, Noda, N.N.
Deposit date:2021-09-08
Release date:2022-03-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Phosphorylation by casein kinase 2 enhances the interaction between ER-phagy receptor TEX264 and ATG8 proteins.
Embo Rep., 23, 2022
3VU1
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BU of 3vu1 by Molmil
Crystal structure of the C-terminal globular domain of oligosaccharyltransferase (PhAglB-L, O74088_PYRHO) from Pyrococcus horikoshii
Descriptor: CALCIUM ION, CHLORIDE ION, Putative uncharacterized protein PH0242
Authors:Nyirenda, J, Matsumoto, S, Saitoh, T, Maita, N, Noda, N.N, Inagaki, F, Kohda, D.
Deposit date:2012-06-13
Release date:2013-01-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystallographic and NMR Evidence for Flexibility in Oligosaccharyltransferases and Its Catalytic Significance
Structure, 21, 2013
3VX6
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BU of 3vx6 by Molmil
Crystal structure of Kluyveromyces marxianus Atg7NTD
Descriptor: E1
Authors:Yamaguchi, M, Matoba, K, Sawada, R, Fujioka, Y, Nakatogawa, H, Yamamoto, H, Kobashigawa, Y, Hoshida, H, Akada, R, Ohsumi, Y, Noda, N.N, Inagaki, F.
Deposit date:2012-09-11
Release date:2012-11-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Noncanonical recognition and UBL loading of distinct E2s by autophagy-essential Atg7.
Nat.Struct.Mol.Biol., 19, 2012
3VQI
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BU of 3vqi by Molmil
Crystal structure of Kluyveromyces marxianus Atg5
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Atg5, SULFATE ION
Authors:Yamaguchi, M, Noda, N.N, Yamamoto, H, Shima, T, Kumeta, H, Kobashigawa, Y, Akada, R, Ohsumi, Y, Inagaki, F.
Deposit date:2012-03-24
Release date:2012-08-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural insights into atg10-mediated formation of the autophagy-essential atg12-atg5 conjugate
Structure, 20, 2012
2Z0D
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BU of 2z0d by Molmil
The crystal structure of human Atg4B- LC3(1-120) complex
Descriptor: Cysteine protease ATG4B, Microtubule-associated proteins 1A/1B light chain 3B
Authors:Satoo, K, Noda, N.N, Inagaki, F.
Deposit date:2007-05-07
Release date:2007-05-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structure of Atg4B-LC3 complex reveals the mechanism of LC3 processing and delipidation during autophagy.
Embo J., 28, 2009
2Z0E
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BU of 2z0e by Molmil
The crystal structure of human Atg4B- LC3(1-124) complex
Descriptor: Cysteine protease ATG4B, Microtubule-associated proteins 1A/1B light chain 3B
Authors:Satoo, K, Noda, N.N, Inagaki, F.
Deposit date:2007-05-07
Release date:2007-05-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structure of Atg4B-LC3 complex reveals the mechanism of LC3 processing and delipidation during autophagy.
Embo J., 28, 2009
3A7P
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BU of 3a7p by Molmil
The crystal structure of Saccharomyces cerevisiae Atg16
Descriptor: Autophagy protein 16
Authors:Fujioka, Y, Noda, N.N, Inagaki, F.
Deposit date:2009-10-01
Release date:2009-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Dimeric coiled-coil structure of Saccharomyces cerevisiae Atg16 and its functional significance in autophagy.
J.Biol.Chem., 285, 2010
3A77
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BU of 3a77 by Molmil
The crystal structure of phosphorylated IRF-3
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, Interferon regulatory factor 3
Authors:Takahasi, K, Horiuchi, M, Noda, N.N, Inagaki, F.
Deposit date:2009-09-17
Release date:2010-08-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Ser386 phosphorylation of transcription factor IRF-3 induces dimerization and association with CBP/p300 without overall conformational change.
Genes Cells, 15, 2010
2ZZP
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BU of 2zzp by Molmil
The crystal structure of human Atg4B(C74S)- LC3(1-124) complex
Descriptor: Cysteine protease ATG4B, Microtubule-associated proteins 1A/1B light chain 3B
Authors:Satoo, K, Noda, N.N, Inagaki, F.
Deposit date:2009-02-22
Release date:2009-03-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The structure of Atg4B-LC3 complex reveals the mechanism of LC3 processing and delipidation during autophagy.
Embo J., 28, 2009
3A7O
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BU of 3a7o by Molmil
The crystal structure of the coiled-coil domain of Saccharomyces cerevisiae Atg16
Descriptor: Autophagy protein 16
Authors:Fujioka, Y, Noda, N.N, Inagaki, F.
Deposit date:2009-10-01
Release date:2009-11-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Dimeric coiled-coil structure of Saccharomyces cerevisiae Atg16 and its functional significance in autophagy.
J.Biol.Chem., 285, 2010
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