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PDB: 262 results

3CAN
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BU of 3can by Molmil
Crystal structure of a domain of pyruvate-formate lyase-activating enzyme from Bacteroides vulgatus ATCC 8482
Descriptor: Pyruvate-formate lyase-activating enzyme
Authors:Nocek, B, Hendricks, R, Hatzos, C, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-02-20
Release date:2008-03-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a domain of pyruvate-formate lyase-activating enzyme from Bacteroides vulgatus ATCC 8482.
To be Published
5DPO
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BU of 5dpo by Molmil
The crystal structure of uncharacterized protein (LPG2149) from Legionella pneumophila
Descriptor: Uncharacterized protein
Authors:Nocek, B, Cuff, M, Evdokimova, E, Joachimiak, A, Savchenko, A.
Deposit date:2015-09-13
Release date:2015-11-25
Method:X-RAY DIFFRACTION (1.644 Å)
Cite:The crystal structure of uncharacterized protein (LPG2149) from Legionella pneumophila
To Be Published
2A5Z
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BU of 2a5z by Molmil
Crystal Structure of Protein of Unknown Function SO2946 from Shewanella oneidensis MR-1
Descriptor: MAGNESIUM ION, hypothetical protein SO2946
Authors:Nocek, B, Bigelow, L, Abdullah, J, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-07-01
Release date:2005-08-16
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.015 Å)
Cite:Structure of SO2946 orphan from Shewanella oneidensis shows "jelly-roll" fold with carbohydrate-binding module.
J.STRUCT.FUNCT.GENOM., 9, 2008
3CK2
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BU of 3ck2 by Molmil
Crystal structure of conserved uncharacterized protein (predicted phosphoesterase COG0622) from Streptococcus pneumoniae TIGR4
Descriptor: CHLORIDE ION, Conserved uncharacterized protein (predicted phosphoesterase COG0622), MANGANESE (II) ION, ...
Authors:Nocek, B, Zhou, M, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-03-14
Release date:2008-04-01
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of conserved uncharacterized protein (predicted phosphoesterase COG0622) from Streptococcus pneumoniae TIGR4.
To be Published
3D1P
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BU of 3d1p by Molmil
Atomic resolution structure of uncharacterized protein from Saccharomyces cerevisiae
Descriptor: ACETATE ION, CHLORIDE ION, Putative thiosulfate sulfurtransferase YOR285W
Authors:Nocek, B, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-05-06
Release date:2008-07-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Atomic resolution structure of uncharacterized protein from Saccharomyces cerevisiae.
To be Published
5UEJ
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BU of 5uej by Molmil
1.30 A crystal structure of DapE enzyme from Neisseria meningitidis MC58
Descriptor: SULFATE ION, Succinyl-diaminopimelate desuccinylase, ZINC ION
Authors:Nocek, B, Joachimiak, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-01-02
Release date:2017-02-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:1.30 A crystal structure of DapE enzyme from Neisseria meningitidis MC58
To Be Published
1Z6M
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BU of 1z6m by Molmil
Structure of Conserved Protein of Unknown Function from Enterococcus faecalis V583
Descriptor: PHOSPHATE ION, conserved hypothetical protein
Authors:Nocek, B.P, Li, H, Collart, F, Joachimiak, A, MCSG, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-03-22
Release date:2005-05-03
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure of a conserved hypothetical protein from Enterococcus faecalis V583
To be Published
5USD
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BU of 5usd by Molmil
Crystal structure of MccF-like protein (BA_5613) in the complex with aspartyl sulfamoyl adenylate
Descriptor: 5'-O-(L-alpha-aspartylsulfamoyl)adenosine, GLYCEROL, Peptidase S66
Authors:Nocek, B, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-02-13
Release date:2017-03-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.095 Å)
Cite:Crystal structure of MccF-like protein (BA_5613) in the complex with aspartyl sulfamoyl adenylate
To Be Published
1Y0K
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BU of 1y0k by Molmil
Structure of Protein of Unknown Function PA4535 from Pseudomonas aeruginosa strain PAO1, Monooxygenase Superfamily
Descriptor: hypothetical protein PA4535
Authors:Nocek, B.P, Evdokimova, E, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-11-15
Release date:2005-01-18
Last modified:2014-11-26
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:1.75 A Crystal Structure of the Hypothetical Protein Pa4535 from Pseudomonas Aeruginosa
To be Published
4HC5
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BU of 4hc5 by Molmil
Crystal structure of member of Glyoxalase/bleomycin resistance protein/dioxygenase superfamily from Sphaerobacter thermophilus DSM 20745
Descriptor: GLYCEROL, Glyoxalase/bleomycin resistance protein/dioxygenase
Authors:Nocek, B, Hatzos-Skintges, C, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-09-28
Release date:2012-11-28
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of member of Glyoxalase/bleomycin resistance protein/dioxygenase superfamily from Sphaerobacter thermophilus DSM 20745
To be Published
2PHN
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BU of 2phn by Molmil
Crystal structure of an amide bond forming F420-gamma glutamyl ligase from Archaeoglobus fulgidus
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, F420-0:gamma-glutamyl ligase, ...
Authors:Nocek, B, Evdokimova, E, Kudritska, M, Edwards, A, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-04-11
Release date:2007-05-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of an Amide Bond Forming F(420):gammagamma-glutamyl Ligase from Archaeoglobus Fulgidus - A Member of a New Family of Non-ribosomal Peptide Synthases.
J.Mol.Biol., 372, 2007
4MAK
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BU of 4mak by Molmil
Crystal structure of a putative ssRNA endonuclease Cas2, CRISPR adaptation protein from E.coli
Descriptor: CRISPR-associated endoribonuclease Cas2, DI(HYDROXYETHYL)ETHER
Authors:Nocek, B, Skarina, T, Brown, G, Yakunin, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-08-16
Release date:2013-09-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal structure of a putative ssRNA endonuclease Cas2, CRISPR adaptation protein from E.coli
TO BE PUBLISHED
4PW4
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BU of 4pw4 by Molmil
Crystal structure of Aminopeptidase N in complex with phosphonic acid analogue of homophenylalanine L-(R)-hPheP
Descriptor: Aminopeptidase N, GLYCEROL, IMIDAZOLE, ...
Authors:Nocek, B, Mulligan, R, Vassiliou, S, Berlicki, L, Mucha, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-03-18
Release date:2014-06-25
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of Aminopeptidase N in complex with phosphonic analogs of homophenylalanine
TO BE PUBLISHED
2OCD
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BU of 2ocd by Molmil
Crystal structure of L-asparaginase I from Vibrio cholerae O1 biovar eltor str. N16961
Descriptor: ACETATE ION, GLYCEROL, L-asparaginase I
Authors:Nocek, B, Wu, R, Osipiuk, J, Moy, S, Kim, Y, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-12-20
Release date:2007-01-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of L-asparaginase I from Vibrio cholerae O1 biovar eltor str. N16961
To be Published
4LZK
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BU of 4lzk by Molmil
Crystal structure of inclusion body protein (PixA pfam12306) from Burkholderia cenocepacia J2315
Descriptor: PixA inclusion body protein
Authors:Nocek, B, Li, H, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-07-31
Release date:2013-11-13
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structure of inclusion body protein (PixA pfam12306) from Burkholderia cenocepacia J2315
TO BE PUBLISHED
4OQJ
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BU of 4oqj by Molmil
Streptomcyes albus JA3453 oxazolomycin ketosynthase domain OzmQ KS1
Descriptor: GLYCEROL, PHOSPHATE ION, PKS, ...
Authors:Nocek, B, Mack, J, Endras, M, Babnigg, G, Bingman, C.A, Yennamalli, R, Lohman, J.R, Ma, M, Shen, B, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2014-02-09
Release date:2014-03-19
Last modified:2016-11-02
Method:X-RAY DIFFRACTION (1.904 Å)
Cite:Structural and evolutionary relationships of "AT-less" type I polyketide synthase ketosynthases.
Proc.Natl.Acad.Sci.USA, 112, 2015
4KQ9
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BU of 4kq9 by Molmil
Crystal structure of periplasmic ribose ABC transporter from Conexibacter woesei DSM 14684
Descriptor: GLYCEROL, Ribose ABC transporter, substrate binding protein
Authors:Nocek, B, Chhor, G, Endres, M, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-05-14
Release date:2013-05-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of periplasmic ribose ABC transporter from Conexibacter woesei DSM 14684
To be Published
4DIB
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BU of 4dib by Molmil
The crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Bacillus anthracis str. Sterne
Descriptor: Glyceraldehyde 3-phosphate dehydrogenase, SULFATE ION
Authors:Nocek, B, Makowska-Grzyska, M, Papazisi, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-01-30
Release date:2012-02-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:The crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Bacillus anthracis str. Sterne
To be Published
2P06
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BU of 2p06 by Molmil
Crystal structure of a predicted coding region AF_0060 from Archaeoglobus fulgidus DSM 4304
Descriptor: GLYCEROL, Hypothetical protein AF_0060, MAGNESIUM ION
Authors:Nocek, B, Xu, X, Koniyenko, Y, Yakounine, A, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-02-28
Release date:2007-03-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a predicted coding region AF_0060 from Archaeoglobus fulgidus DSM 4304
To be Published
6ANH
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BU of 6anh by Molmil
Crystal structure of PPK2 class III in complex with Guanosine 5-tetraphosphate
Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]oxy}phosphoryl]guanosine, Polyphosphate:AMP phosphotransferase
Authors:Nocek, B, Joachimiak, A, Yakunin, A.
Deposit date:2017-08-13
Release date:2019-01-16
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural Insights into Substrate Selectivity and Activity of Bacterial Polyphosphate Kinases
Acs Catalysis, 8, 2018
6ANG
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BU of 6ang by Molmil
Crystal structure of PPK2 Class III in the complex with AMP from Cytophaga hutchinsonii ATCC 33406
Descriptor: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, Polyphosphate:AMP phosphotransferase
Authors:Nocek, B, Joachimiak, A, Yakunin, A.
Deposit date:2017-08-13
Release date:2019-01-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural Insights into Substrate Selectivity and Activity of Bacterial Polyphosphate Kinases
Acs Catalysis, 8, 2018
6AU0
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BU of 6au0 by Molmil
Crystal structure of PPK2 (Class III) in complex with bisphosphonate inhibitor (2-((3,5-dichlorophenyl)amino)ethane-1,1-diyl)diphosphonic acid
Descriptor: GLYCEROL, Polyphosphate:AMP phosphotransferase, {[(3,5-dichlorophenyl)amino]methylene}bis(phosphonic acid)
Authors:Nocek, B, Ruszkowski, M, Joachimiak, A, Berlicki, L, Yakunin, A.
Deposit date:2017-08-29
Release date:2019-01-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Insights into Substrate Selectivity and Activity of Bacterial Polyphosphate Kinases
Acs Catalysis, 8, 2018
4QHP
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BU of 4qhp by Molmil
Crystal structure of Aminopeptidase N in complex with the phosphinic dipeptide analogue LL-(R,S)-hPheP[CH2]Phe(4-CH2NH2)
Descriptor: (2R)-2-[4-(aminomethyl)benzyl]-3-[(R)-[(1R)-1-amino-3-phenylpropyl](hydroxy)phosphoryl]propanoic acid, (2S)-2-[4-(aminomethyl)benzyl]-3-[(R)-[(1R)-1-amino-3-phenylpropyl](hydroxy)phosphoryl]propanoic acid, Aminopeptidase N, ...
Authors:Nocek, B, Joachimiak, A.
Deposit date:2014-05-28
Release date:2014-09-24
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure-guided, single-point modifications in the phosphinic dipeptide structure yield highly potent and selective inhibitors of neutral aminopeptidases.
J.Med.Chem., 57, 2014
4QME
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BU of 4qme by Molmil
Crystal structure of Aminopeptidase N in complex with the phosphinic dipeptide analogue LL-(R,S)-hPheP[CH2]Phe
Descriptor: (2S)-3-[(S)-[(1R)-1-amino-3-phenylpropyl](hydroxy)phosphoryl]-2-benzylpropanoic acid, Aminopeptidase N, GLYCEROL, ...
Authors:Nocek, B, Vassilious, S, Mulligan, R, Berlicki, L, Mucha, A, Joachimiak, A.
Deposit date:2014-06-16
Release date:2014-10-01
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Structure-guided, single-point modifications in the phosphinic dipeptide structure yield highly potent and selective inhibitors of neutral aminopeptidases.
J.Med.Chem., 57, 2014
4LPQ
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BU of 4lpq by Molmil
Crystal structure of the L,D-transpeptidase (residues 123-326) from Xylanimonas cellulosilytica DSM 15894
Descriptor: CHLORIDE ION, ErfK/YbiS/YcfS/YnhG family protein
Authors:Nocek, B, Bigelow, L, Endres, M, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-07-16
Release date:2013-11-13
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Crystal structure of the L,D-transpeptidase (residues 123-326) from Xylanimonas cellulosilytica DSM 15894
To be Published

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PDB entries from 2024-07-17

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