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PDB: 41 件

7Q4K
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Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Fostier, C.R, Ousalem, F, Soufari, H, Leroy, E.C, Ngo, S, Innis, A, Hashem, Y, Boel, G.
登録日2021-10-31
公開日2022-11-16
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Regulation of the macrolide resistance ABC-F translation factor MsrD.
Nat Commun, 14, 2023
7RI3
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Crystal structure of Albireti Toxin, a diphtheria toxin homolog, from Streptomyces albireticuli
分子名称: ACETATE ION, CALCIUM ION, Diphtheria_T domain-containing protein, ...
著者Sugiman-Marangos, S.N, Gill, S.K, Melnyk, R.A.
登録日2021-07-19
公開日2022-04-20
最終更新日2022-11-02
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Structures of distant diphtheria toxin homologs reveal functional determinants of an evolutionarily conserved toxin scaffold.
Commun Biol, 5, 2022
7RB4
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Crystal structure of Peptono Toxin, a diphtheria toxin homolog, from Seinonella peptonophila
分子名称: Diphtheria toxin, C domain, IODIDE ION
著者Sugiman-Marangos, S.N, Gill, S.K, Melnyk, R.A.
登録日2021-07-05
公開日2022-04-20
最終更新日2022-11-02
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Structures of distant diphtheria toxin homologs reveal functional determinants of an evolutionarily conserved toxin scaffold.
Commun Biol, 5, 2022
3L1V
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Crystal structure of GmhB from E. coli in complex with calcium and phosphate.
分子名称: CALCIUM ION, D,D-heptose 1,7-bisphosphate phosphatase, PHOSPHATE ION, ...
著者Sugiman-Marangos, S.N, Junop, M.S.
登録日2009-12-14
公開日2010-01-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.954 Å)
主引用文献Structural and kinetic characterization of the LPS biosynthetic enzyme D-alpha,beta-D-heptose-1,7-bisphosphate phosphatase (GmhB) from Escherichia coli.
Biochemistry, 49, 2010
3L1U
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Crystal structure of Calcium-bound GmhB from E. coli.
分子名称: CALCIUM ION, D,D-heptose 1,7-bisphosphate phosphatase, ZINC ION
著者Sugiman-Marangos, S.N, Junop, M.S.
登録日2009-12-14
公開日2010-01-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural and kinetic characterization of the LPS biosynthetic enzyme D-alpha,beta-D-heptose-1,7-bisphosphate phosphatase (GmhB) from Escherichia coli.
Biochemistry, 49, 2010
5TCO
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Human p38 MAP Kinase in Complex with Dibenzosuberone Compound 1
分子名称: 3-[(3-benzamido-4-fluoranyl-phenyl)amino]-~{N}-(2-morpholin-4-ylethyl)-11-oxidanylidene-5,6-dihydrodibenzo[1,2-~{d}:1',2'-~{f}][7]annulene-9-carboxamide, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
著者Mayer-Wrangowski, S.C, Rauh, D.
登録日2016-09-15
公開日2017-04-19
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Optimized Target Residence Time: Type I1/2 Inhibitors for p38 alpha MAP Kinase with Improved Binding Kinetics through Direct Interaction with the R-Spine.
Angew. Chem. Int. Ed. Engl., 56, 2017
5D10
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Kinase domain of cSrc in complex with RL236
分子名称: N-[4-({4-(4-methylpiperazin-1-yl)-6-[(5-methyl-1H-pyrazol-3-yl)amino]pyrimidin-2-yl}oxy)phenyl]prop-2-enamide, Proto-oncogene tyrosine-protein kinase Src
著者Becker, C, Mayer-Wrangowski, S.C, Julian, E, Rauh, D.
登録日2015-08-03
公開日2015-09-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Targeting Drug Resistance in EGFR with Covalent Inhibitors: A Structure-Based Design Approach.
J.Med.Chem., 58, 2015
3E35
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Actinobacteria-specific protein of unknown function, SCO1997
分子名称: MAGNESIUM ION, Uncharacterized protein SCO1997
著者Gao, B, Gupta, R.S, Sugiman-Marangos, S, Junop, M.S.
登録日2008-08-06
公開日2009-06-23
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and phylogenetic analysis of a conserved actinobacteria-specific protein (ASP1; SCO1997) from Streptomyces coelicolor.
Bmc Struct.Biol., 9, 2009
7P3I
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Crystal structure of human CD40/TNFRSF5 in complex with the anti-CD40 DARPin protein
分子名称: Darpin, SODIUM ION, Tumor necrosis factor receptor superfamily member 5
著者Malvezzi, F, Mangold, S, Hospodarsch, T, Reichen, C, Iss, C, Lammens, A, Krapp, S, Domke, C.
登録日2021-07-07
公開日2022-04-06
最終更新日2022-05-11
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献A Multispecific Anti-CD40 DARPin Construct Induces Tumor-Selective CD40 Activation and Tumor Regression.
Cancer Immunol Res, 10, 2022
3UVQ
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Human p38 MAP Kinase in Complex with a Dibenzosuberone Derivative
分子名称: Mitogen-activated protein kinase 14, N-{5-[(7-{[(2R)-2,3-dihydroxypropyl]oxy}-5-oxo-10,11-dihydro-5H-dibenzo[a,d][7]annulen-2-yl)amino]-2-fluorophenyl}benzamide, octyl beta-D-glucopyranoside
著者Mayer-Wrangowski, S.C, Richters, A, Gruetter, C, Rauh, D.
登録日2011-11-30
公開日2012-12-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Dibenzosuberones as p38 mitogen-activated protein kinase inhibitors with low ATP competitiveness and outstanding whole blood activity.
J.Med.Chem., 56, 2013
3ESQ
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Crystal Structure of Calcium-bound D,D-heptose 1.7-bisphosphate phosphatase from E. Coli
分子名称: CALCIUM ION, D,D-heptose 1,7-bisphosphate phosphatase, ZINC ION
著者Sugiman-Marangos, S.N, Junop, M.S.
登録日2008-10-06
公開日2008-10-14
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of D,D-heptose 1.7-bisphosphate phosphatase from E. Coli.
To be Published
3ESR
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Crystal Structure of D,D-heptose1.7-bisphosphate phosphatase from E. coli in complex with calcium and phosphate
分子名称: CALCIUM ION, D,D-heptose 1,7-bisphosphate phosphatase, PHOSPHATE ION, ...
著者Sugiman-Marangos, S.N, Junop, M.S.
登録日2008-10-06
公開日2008-10-14
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal Structure of D,D-heptose 1.7-bisphosphate phosphatase from E. Coli.
To be Published
3QUE
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Human p38 MAP Kinase in Complex with Skepinone-L
分子名称: 2-[(2,4-difluorophenyl)amino]-7-{[(2R)-2,3-dihydroxypropyl]oxy}-10,11-dihydro-5H-dibenzo[a,d][7]annulen-5-one, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
著者Gruetter, C, Mayer-Wrangowski, S, Richters, A, Rauh, D.
登録日2011-02-23
公開日2012-01-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Skepinone-L is a selective p38 mitogen-activated protein kinase inhibitor.
Nat.Chem.Biol., 8, 2012
4IQZ
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The crystal structure of a large insert in RNA polymerase (RpoC) subunit from E. coli
分子名称: DNA-directed RNA polymerase subunit beta', IODIDE ION, SODIUM ION
著者Bhandari, V, Sugiman-Marangos, S.N, Naushad, H.S, Gupta, R.S, Junop, M.S.
登録日2013-01-14
公開日2013-02-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The crystal structure of a large insert in RNA polymerase (RpoC) subunit from E. coli
To be Published
4IPV
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Crystal structure of Pseudomonas aeruginosa (strain: PAO1) type IV minor pilin FimU in space group P65
分子名称: FimU protein
著者Nguyen, Y, Sugiman-Marangos, S.N, Bell, S, Junop, M.S, Burrows, L.L.
登録日2013-01-10
公開日2014-01-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Minor pilin FimU controls P. aeruginosa type IV pilus extension/retraction dynamics independently of other minor components
To be Published
4EXW
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BU of 4exw by Molmil
The structure of DdrB from Deinococcus: a new fold for single-stranded DNA binding proteins.
分子名称: Single-stranded DNA-binding protein DdrB
著者Sugiman-Marangos, S, Junop, M.S.
登録日2012-05-01
公開日2012-07-11
最終更新日2018-10-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The structure of DdrB from Deinococcus: a new fold for single-stranded DNA binding proteins.
Nucleic Acids Res., 38, 2010
3Q9D
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Crystal Structure of Cpn0803 from C. pneumoniae.
分子名称: Protein CPn_0803/CP_1068/CPj0803/CpB0832
著者Stone, C.B, Sugiman-Marangos, S.N, Junop, M.S, Mahony, J.B.
登録日2011-01-07
公開日2012-01-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Cpn0803 from C. pneumoniae.
To be Published
3UVP
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Human p38 MAP Kinase in Complex with a Benzamide Substituted Benzosuberone
分子名称: Mitogen-activated protein kinase 14, N-{2-fluoro-5-[(5-oxo-6,7,8,9-tetrahydro-5H-benzo[7]annulen-2-yl)amino]phenyl}benzamide, octyl beta-D-glucopyranoside
著者Mayer-Wrangowski, S.C, Richters, A, Gruetter, C, Rauh, D.
登録日2011-11-30
公開日2012-11-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Targeting the Hinge Glycine Flip and the Activation Loop: Novel Approach to Potent p38 alpha Inhibitors.
J.Med.Chem., 55, 2012
4IPU
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Crystal structure of Pseudomonas aeruginosa (strain: PAO1) type IV minor pilin FimU in space group P21
分子名称: FimU protein
著者Nguyen, Y, Sugiman-Marangos, S.N, Bell, S, Junop, M.S, Burrows, L.L.
登録日2013-01-10
公開日2014-01-15
実験手法X-RAY DIFFRACTION (1.351 Å)
主引用文献Role of minor pilins in Pseudomonas aeruginosa type IV pilus dynamics
To be Published
4NOA
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Truncated minor pilin PilE from Pseudomonas aeruginosa
分子名称: Type 4 fimbrial biogenesis protein PilE
著者Nguyen, Y, Sugiman-Marangos, S.N, Bell, S, Junop, M.S, Burrows, L.L.
登録日2013-11-19
公開日2014-11-19
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Crystal structure of truncated minor pilin PilE from Pseudomonas aeruginosa
To be Published
4NPH
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Crystal structure of SsaN from Salmonella enterica
分子名称: Probable secretion system apparatus ATP synthase SsaN
著者Sugiman-Marangos, S.N, Zhang, K, Cooper, C.A, Coombes, B.K, Junop, M.S.
登録日2013-11-21
公開日2014-07-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Crystal structure of SsaN from Salmonella enterica
J.Biol.Chem., 2014
4HQB
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Crystal structure of DdrB from Deinococcus radiodurans bound to ssDNA
分子名称: 5'-D(*TP*TP*TP*T)-3', 5'-D(P*TP*TP*TP*TP*T)-3', Single-stranded DNA-binding protein DdrB
著者Sugiman-Marangos, S.N, Junop, M.S.
登録日2012-10-25
公開日2013-09-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Crystal structure of the DdrB/ssDNA complex from Deinococcus radiodurans reveals a DNA binding surface involving higher-order oligomeric states.
Nucleic Acids Res., 41, 2013
4MBQ
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TPR3 of FimV from P. aeruginosa (PAO1)
分子名称: Motility protein FimV
著者Nguyen, Y, Zhang, K, Daniel-Ivad, M, Robinson, H, Wolfram, F, Sugiman-Marangos, S.N, Junop, M.S, Burrows, L.L, Howell, P.L.
登録日2013-08-19
公開日2014-08-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.006 Å)
主引用文献Crystal structure of TPR2 from FimV
To be Published
4NOE
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Crystal structure of DdrB bound to 30b ssDNA
分子名称: 5'-D(*TP*TP*GP*CP*GP*CP*TP*TP*GP*CP*GP*CP*TP*TP*GP*CP*GP*CP*TP*TP*GP*CP*GP*CP*TP*TP*GP*CP*GP*CP)-3', CALCIUM ION, Single-stranded DNA-binding protein DdrB
著者Sugiman-Marangos, S.N, Weiss, Y.M, Junop, M.S.
登録日2013-11-19
公開日2015-05-20
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mechanism for accurate, protein-assisted DNA annealing by Deinococcus radiodurans DdrB.
Proc.Natl.Acad.Sci.USA, 113, 2016
1K1G
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STRUCTURAL BASIS FOR RECOGNITION OF THE INTRON BRANCH SITE RNA BY SPLICING FACTOR 1
分子名称: 5'-R(*UP*AP*UP*AP*CP*UP*AP*AP*CP*AP*A)-3', SF1-Bo isoform
著者Liu, Z, Luyten, I, Bottomley, M.J, Messias, A.C, Houngninou-Molango, S, Sprangers, R, Zanier, K, Kramer, A, Sattler, M.
登録日2001-09-25
公開日2001-11-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural basis for recognition of the intron branch site RNA by splicing factor 1.
Science, 294, 2001

 

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