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PDB: 196 results

8CNT
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BU of 8cnt by Molmil
Structure of the DEAH-box helicase Prp16 in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, HEXAETHYLENE GLYCOL, MAGNESIUM ION, ...
Authors:Garbers, T.B, Neumann, P, Ficner, R.
Deposit date:2023-02-24
Release date:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Prp16 in complex with ADP.
Acta Crystallogr.,Sect.F, 79, 2023
6H42
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BU of 6h42 by Molmil
crystal structure of the human TGT catalytic subunit QTRT1
Descriptor: BROMIDE ION, CHLORIDE ION, GLUTAMIC ACID, ...
Authors:Johannsson, S, Neumann, P, Ficner, R.
Deposit date:2018-07-20
Release date:2018-09-05
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal Structure of the Human tRNA Guanine Transglycosylase Catalytic Subunit QTRT1.
Biomolecules, 8, 2018
6HVL
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BU of 6hvl by Molmil
CdaA complex with c-di-AMP and AMP
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, ADENOSINE MONOPHOSPHATE, COBALT (II) ION, ...
Authors:Heidemann, J.L, Neumann, P, Ficner, R.
Deposit date:2018-10-11
Release date:2019-06-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structures of the c-di-AMP-synthesizing enzyme CdaA.
J.Biol.Chem., 294, 2019
6HVN
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BU of 6hvn by Molmil
CdaA-APO Y187A Mutant
Descriptor: CHLORIDE ION, Diadenylate cyclase, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
Authors:Heidemann, J.L, Neumann, P, Ficner, R.
Deposit date:2018-10-11
Release date:2019-06-05
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.234 Å)
Cite:Crystal structures of the c-di-AMP-synthesizing enzyme CdaA.
J.Biol.Chem., 294, 2019
6H45
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BU of 6h45 by Molmil
crystal structure of the human TGT catalytic subunit QTRT1 in complex with queuine
Descriptor: 2-amino-5-({[(1S,4S,5R)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, BROMIDE ION, CHLORIDE ION, ...
Authors:Johannsson, S, Neumann, P, Ficner, R.
Deposit date:2018-07-20
Release date:2018-09-05
Last modified:2023-03-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of the Human tRNA Guanine Transglycosylase Catalytic Subunit QTRT1.
Biomolecules, 8, 2018
6HVM
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BU of 6hvm by Molmil
Structural characterization of CdaA-APO
Descriptor: CHLORIDE ION, Diadenylate cyclase, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
Authors:Heidemann, J.L, Neumann, P, Ficner, R.
Deposit date:2018-10-11
Release date:2019-06-05
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the c-di-AMP-synthesizing enzyme CdaA.
J.Biol.Chem., 294, 2019
4K51
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BU of 4k51 by Molmil
Crystal Structure of the PCI domain of eIF3a
Descriptor: Eukaryotic translation initiation factor 3 subunit A
Authors:Khoshnevis, S, Neumann, P, Ficner, R.
Deposit date:2013-04-12
Release date:2014-01-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural integrity of the PCI domain of eIF3a/TIF32 is required for mRNA recruitment to the 43S pre-initiation complexes.
Nucleic Acids Res., 42, 2014
3L9B
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BU of 3l9b by Molmil
Crystal Structure of Rat Otoferlin C2A
Descriptor: MAGNESIUM ION, Otoferlin
Authors:Helfmann, S, Neumann, P.
Deposit date:2010-01-04
Release date:2011-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The crystal structure of the C2A domain of otoferlin reveals an unconventional top loop region.
J.Mol.Biol., 406, 2011
3S1V
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BU of 3s1v by Molmil
Transaldolase from Thermoplasma acidophilum in complex with D-fructose 6-phosphate Schiff-base intermediate
Descriptor: FRUCTOSE -6-PHOSPHATE, GLYCEROL, Probable transaldolase
Authors:Lehwess-Litzmann, A, Neumann, P, Parthier, C, Tittmann, K.
Deposit date:2011-05-16
Release date:2011-08-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Twisted Schiff base intermediates and substrate locale revise transaldolase mechanism.
Nat.Chem.Biol., 7, 2011
3MX8
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BU of 3mx8 by Molmil
Crystal structure of ribonuclease A tandem enzymes and their interaction with the cytosolic ribonuclease inhibitor
Descriptor: CHLORIDE ION, Ribonuclease pancreatic, LINKER, ...
Authors:Leich, F, Neumann, P, Lilie, H, Ulbrich-Hofmann, R, Arnold, U.
Deposit date:2010-05-07
Release date:2011-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of RNase A tandem enzymes and their interaction with the cytosolic ribonuclease inhibitor
Febs J., 278, 2011
1KGJ
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BU of 1kgj by Molmil
Rat transthyretin (also called prealbumin) complex with 3',5'-dibromoflavone (EMD21388)
Descriptor: 6,4'-DIHYDROXY-3-METHYL-3',5'-DIBROMOFLAVONE, TRANSTHYRETIN
Authors:Wojtczak, A, Neumann, P, Muziol, T, Cody, V, Luft, J.R, Pangborn, W.
Deposit date:2001-11-27
Release date:2002-11-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Comparison of binding interactions of dibromoflavonoids with transthyretin.
Acta Biochim.Pol., 48, 2001
3NC0
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BU of 3nc0 by Molmil
Crystal structure of the HIV-1 Rev NES-CRM1-RanGTP nuclear export complex (crystal II)
Descriptor: DI(HYDROXYETHYL)ETHER, Exportin-1, GLYCEROL, ...
Authors:Guttler, T, Madl, T, Neumann, P, Deichsel, D, Corsini, L, Monecke, T, Ficner, R, Sattler, M, Gorlich, D.
Deposit date:2010-06-04
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:NES consensus redefined by structures of PKI-type and Rev-type nuclear export signals bound to CRM1.
Nat.Struct.Mol.Biol., 17, 2010
1KGI
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BU of 1kgi by Molmil
Rat transthyretin (also called prealbumin) complex with 3,3',5,5'-tetraiodothyroacetic acid (t4ac)
Descriptor: 3,3',5,5'-TETRAIODOTHYROACETIC ACID, TRANSTHYRETIN
Authors:Wojtczak, A, Neumann, P, Muziol, T, Cody, V, Luft, J.R, Pangborn, W.
Deposit date:2001-11-27
Release date:2002-11-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Complex of rat transthyretin with tetraiodothyroacetic acid refined at 2.1 and 1.8 A resolution.
Acta Biochim.Pol., 48, 2001
3NBY
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BU of 3nby by Molmil
Crystal structure of the PKI NES-CRM1-RanGTP nuclear export complex
Descriptor: Exportin-1, GTP-binding nuclear protein Ran, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Guttler, T, Madl, T, Neumann, P, Deichsel, D, Corsini, L, Monecke, T, Ficner, R, Sattler, M, Gorlich, D.
Deposit date:2010-06-04
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.42 Å)
Cite:NES consensus redefined by structures of PKI-type and Rev-type nuclear export signals bound to CRM1.
Nat.Struct.Mol.Biol., 17, 2010
3NBZ
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BU of 3nbz by Molmil
Crystal structure of the HIV-1 Rev NES-CRM1-RanGTP nuclear export complex (crystal I)
Descriptor: Exportin-1, GTP-binding nuclear protein Ran, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Guttler, T, Madl, T, Neumann, P, Deichsel, D, Corsini, L, Monecke, T, Ficner, R, Sattler, M, Gorlich, D.
Deposit date:2010-06-04
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:NES consensus redefined by structures of PKI-type and Rev-type nuclear export signals bound to CRM1.
Nat.Struct.Mol.Biol., 17, 2010
3LUO
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BU of 3luo by Molmil
Crystal Structure and functional characterization of the thermophilic prolyl isomerase and chaperone SlyD
Descriptor: Peptidyl-prolyl cis-trans isomerase, Suc-Ala-Leu-Pro-Phe-pNA, ZINC ION
Authors:Loew, C, Neumann, P, Weininger, U, Stubbs, M.T, Balbach, J.
Deposit date:2010-02-18
Release date:2010-03-31
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal Structure Determination and Functional Characterization of the Metallochaperone SlyD from Thermus thermophilus
J.Mol.Biol., 398, 2010
3NC1
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BU of 3nc1 by Molmil
Crystal structure of the CRM1-RanGTP complex
Descriptor: Exportin-1, GTP-binding nuclear protein Ran, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Guttler, T, Madl, T, Neumann, P, Deichsel, D, Corsini, L, Monecke, T, Ficner, R, Sattler, M, Gorlich, D.
Deposit date:2010-06-04
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:NES consensus redefined by structures of PKI-type and Rev-type nuclear export signals bound to CRM1.
Nat.Struct.Mol.Biol., 17, 2010
4BPF
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BU of 4bpf by Molmil
High resolution crystal structure of Bacillus subtilis DltC S36A
Descriptor: D-ALANINE--POLY(PHOSPHORIBITOL) LIGASE SUBUNIT 2
Authors:Zimmermann, S, Neumann, P, Stubbs, M.T.
Deposit date:2013-05-26
Release date:2014-06-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:High-Resolution Structures of the D-Alanyl Carrier Protein (Dcp) Dltc from Bacillus Subtilis Reveal Equivalent Conformations of Apo- and Holo-Forms
FEBS Lett., 589, 2015
4BPH
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BU of 4bph by Molmil
High resolution crystal structure of Bacillus subtilis DltC
Descriptor: 4'-PHOSPHOPANTETHEINE, D-ALANINE--POLY(PHOSPHORIBITOL) LIGASE SUBUNIT 2, MAGNESIUM ION
Authors:Zimmermann, S, Neumann, P, Stubbs, M.T.
Deposit date:2013-05-26
Release date:2014-06-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:High-Resolution Structures of the D-Alanyl Carrier Protein (Dcp) Dltc from Bacillus Subtilis Reveal Equivalent Conformations of Apo- and Holo-Forms
FEBS Lett., 589, 2015
4BPG
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BU of 4bpg by Molmil
Crystal structure of Bacillus subtilis DltC
Descriptor: D-ALANINE--POLY(PHOSPHORIBITOL) LIGASE SUBUNIT 2
Authors:Yonus, H, Zimmermann, S, Neumann, P, Stubbs, M.T.
Deposit date:2013-05-26
Release date:2014-06-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:High-Resolution Structures of the D-Alanyl Carrier Protein (Dcp) Dltc from Bacillus Subtilis Reveal Equivalent Conformations of Apo- and Holo-Forms
FEBS Lett., 589, 2015
4B1T
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BU of 4b1t by Molmil
Structure of the factor Xa-like trypsin variant triple-Ala (TA) in complex with eglin C
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CATIONIC TRYPSIN, ...
Authors:Menzel, A, Neumann, P, Stubbs, M.T.
Deposit date:2012-07-12
Release date:2012-08-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Thermodynamic signatures in macromolecular interactions involving conformational flexibility.
Biol.Chem., 395, 2014
4B2A
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BU of 4b2a by Molmil
Structure of the factor Xa-like trypsin variant triple-Ala (TGA) in complex with eglin C
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CATIONIC TRYPSIN, ...
Authors:Menzel, A, Neumann, P, Stubbs, M.T.
Deposit date:2012-07-13
Release date:2012-08-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Thermodynamic signatures in macromolecular interactions involving conformational flexibility.
Biol.Chem., 395, 2014
4B2C
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BU of 4b2c by Molmil
Structure of the factor Xa-like trypsin variant triple-Ala (TPA) in complex with eglin C
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CATIONIC TRYPSIN, ...
Authors:Menzel, A, Neumann, P, Stubbs, M.T.
Deposit date:2012-07-13
Release date:2012-08-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Thermodynamic signatures in macromolecular interactions involving conformational flexibility.
Biol.Chem., 395, 2014
4B2B
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BU of 4b2b by Molmil
Structure of the factor Xa-like trypsin variant triple-Ala (TGPA) in complex with eglin C
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CATIONIC TRYPSIN, ...
Authors:Menzel, A, Neumann, P, Stubbs, M.T.
Deposit date:2012-07-13
Release date:2012-08-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Thermodynamic signatures in macromolecular interactions involving conformational flexibility.
Biol.Chem., 395, 2014
3PWB
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BU of 3pwb by Molmil
Bovine trypsin variant X(tripleGlu217Ile227) in complex with small molecule inhibitor
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Tziridis, A, Neumann, P, Kolenko, P, Stubbs, M.T.
Deposit date:2010-12-08
Release date:2011-12-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Correlating structure and ligand affinity in drug discovery: a cautionary tale involving second shell residues.
Biol.Chem., 395, 2014

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