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PDB: 25 results

7JWX
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BU of 7jwx by Molmil
Crystal Structure of Trypsin Bound O-methyl Benzamidine
Descriptor: 4-[(1-{(1S,2S)-1-[1-(4-aminobutyl)-1H-1,2,3-triazol-4-yl]-2-methylbutyl}-1H-1,2,3-triazol-4-yl)methoxy]-3-methoxybenzene-1-carboximidamide, CALCIUM ION, CHLORIDE ION, ...
Authors:Packianathan, C, Laganowsky, A.
Deposit date:2020-08-26
Release date:2021-08-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Small molecule peptidomimetic trypsin inhibitors: validation of an EKO binding mode, but with a twist.
Org.Biomol.Chem., 20, 2022
5JX7
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BU of 5jx7 by Molmil
Cysteine mutant (C224A) structure of As (III) S-adenosyl methyltransferase
Descriptor: Arsenic methyltransferase, CALCIUM ION
Authors:Packianathan, C, Marapakala, K, Ajees, A.A, Kandavelu, P, Sankaran, B, Rosen, B.P.
Deposit date:2016-05-12
Release date:2017-05-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Cysteine mutant (C224A) structure of As (III) S-adenosyl methyltransferase
To be Published
6CX6
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BU of 6cx6 by Molmil
The structure of an As(III) S-adenosylmethionine methyltransferase with As(III) and S-adenosyl-L-homocysteine (SAH)
Descriptor: ARSENIC, Arsenic methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Packianathan, C, Kandavelu, P, Rosen, B.P.
Deposit date:2018-04-02
Release date:2018-06-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:The Structure of an As(III) S-Adenosylmethionine Methyltransferase with 3-Coordinately Bound As(III) Depicts the First Step in Catalysis.
Biochemistry, 57, 2018
4RSR
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BU of 4rsr by Molmil
ArsM arsenic(III) S-adenosylmethionine methyltransferase with trivalent phenyl arsencial derivative-Roxarsone
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-arsanyl-2-nitrophenol, Arsenic methyltransferase, ...
Authors:Packianathan, C, Marapakala, K, Ajees, A.A, Kandavelu, P, Rosen, B.P.
Deposit date:2014-11-10
Release date:2014-12-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A disulfide-bond cascade mechanism for arsenic(III) S-adenosylmethionine methyltransferase.
Acta Crystallogr.,Sect.D, 71, 2015
4KW7
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BU of 4kw7 by Molmil
The structure of an As(III) S-adenosylmethionine methyltransferase with Phenylarsine oxide(PAO)
Descriptor: Arsenic methyltransferase, CALCIUM ION, Phenylarsine oxide
Authors:Packianathan, C, Marapakala, K, Ajees, A.A, Kandavelu, P, Rosen, B.P.
Deposit date:2013-05-23
Release date:2014-05-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A disulfide-bond cascade mechanism for arsenic(III) S-adenosylmethionine methyltransferase.
Acta Crystallogr.,Sect.D, 71, 2015
5EG5
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BU of 5eg5 by Molmil
As (III) S-adenosylmethyltransferase cysteine mutant C72A bound Phenylarsine oxide (PhAs(III) in the arsenic binding site
Descriptor: Arsenic methyltransferase, CALCIUM ION, Phenylarsine oxide
Authors:Packianathan, C, Marapakala, K, Kandavelu, P, Rosen, B.P.
Deposit date:2015-10-26
Release date:2016-11-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:As (III) S-adenosylmethyltransferase cysteine mutant C72A bound Phenylarsine oxide (PhAs(III) in the arsenic binding site
To Be Published
5EVJ
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BU of 5evj by Molmil
X-ray crystal structure of CrArsM, an arsenic (III) S-adenosylmethionine methyltransferase from Chlamydomonas reinhardtii
Descriptor: Arsenite methyltransferase, SODIUM ION
Authors:Packianathan, C, Kandavelu, P, Sankaran, B, Rosen, B.P.
Deposit date:2015-11-19
Release date:2016-11-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of CrArsM, an arsenic (III) S-adenosylmethionine methyltransferase from Chlamydomonas reinhardtii
To Be Published
3KXS
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BU of 3kxs by Molmil
Crystal structure of HBV capsid mutant dimer (oxy form), strain adyw
Descriptor: Capsid protein
Authors:Packianathan, C, Katen, S.P, Zlotnick, A.
Deposit date:2009-12-03
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Conformational changes in the hepatitis B virus core protein are consistent with a role for allostery in virus assembly
J.Virol., 84, 2010
2QLS
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BU of 2qls by Molmil
crystal structure of hemoglobin from dog (Canis familiaris) at 3.5 Angstrom resolution
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
Authors:Packianathan, C, Sundaresan, S, Palani, K, Neeelagandan, K, Ponnuswamy, M.N.
Deposit date:2007-07-13
Release date:2008-07-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Purification, Crystallization and Crystal structure analysis of hemoglobin from Dog (Canis familiaris)
To be Published
2QMB
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BU of 2qmb by Molmil
Structure determination of haemoglobin from Turkey(meleagris gallopavo) at 2.8 Angstrom resolution
Descriptor: Hemoglobin beta chain, Hemoglobin subunit alpha-A, OXYGEN MOLECULE, ...
Authors:Packianathan, C, Sundaresan, S, Ponnuswamy, M.N.
Deposit date:2007-07-15
Release date:2008-07-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:X-ray crystal structure analysis of hemoglobin from turkey(meleagris gallopavo) at 2.80 Angstrom resolution
To be Published
1KNC
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BU of 1knc by Molmil
Structure of AhpD from Mycobacterium tuberculosis, a novel enzyme with thioredoxin-like activity.
Descriptor: AhpD protein, SULFATE ION
Authors:Bryk, R, Lima, C.D, Erdjument-Bromage, H, Tempst, P, Nathan, C.
Deposit date:2001-12-18
Release date:2002-01-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Metabolic enzymes of mycobacteria linked to antioxidant defense by a thioredoxin-like protein.
Science, 295, 2002
2FHG
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BU of 2fhg by Molmil
Crystal Structure of Mycobacterial Tuberculosis Proteasome
Descriptor: 20S proteasome, alpha and beta subunits, proteasome, ...
Authors:Hu, G, Lin, G, Wang, M, Dick, L, Xu, R.M, Nathan, C, Li, H.
Deposit date:2005-12-23
Release date:2006-02-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.23 Å)
Cite:Structure of the Mycobacterium tuberculosis proteasome and mechanism of inhibition by a peptidyl boronate.
Mol.Microbiol., 59, 2006
5TRG
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BU of 5trg by Molmil
Structure of Mycobacterium tuberculosis proteasome in complex with N,C-capped dipeptide DPLG-2
Descriptor: N,N-diethyl-N~2~-[(2E)-3-phenylprop-2-enoyl]-L-asparaginyl-4-fluoro-N-[(naphthalen-1-yl)methyl]-L-phenylalaninamide, Proteasome subunit alpha, Proteasome subunit beta
Authors:Hsu, H.-C, Fan, H, Singh, R.K, Wang, R, Sukenick, G, Nathan, C, Lin, G, Li, H.
Deposit date:2016-10-26
Release date:2017-01-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.804 Å)
Cite:Structural Basis for the Species-Selective Binding of N,C-Capped Dipeptides to the Mycobacterium tuberculosis Proteasome.
Biochemistry, 56, 2017
5TS0
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BU of 5ts0 by Molmil
Structure of Mycobacterium tuberculosis proteasome in complex with N,C-capped dipeptide PKS2208
Descriptor: (2S)-N-{(2S)-3-methoxy-1-[(naphthalen-1-ylmethyl)amino]-1-oxopropan-2-yl}-4-oxo-2-[(3-phenylpropanoyl)amino]-4-(1H-pyrrol-1-yl)butanamide (non-preferred name), Proteasome subunit alpha, Proteasome subunit beta
Authors:Hsu, H.-C, Fan, H, Singh, P.K, Wang, R, Sukenick, G, Nathan, C, Lin, G, Li, H.
Deposit date:2016-10-27
Release date:2017-01-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.84679747 Å)
Cite:Structural Basis for the Species-Selective Binding of N,C-Capped Dipeptides to the Mycobacterium tuberculosis Proteasome.
Biochemistry, 56, 2017
5TRS
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BU of 5trs by Molmil
Structure of Mycobacterium tuberculosis proteasome in complex with N,C-capped dipeptide PKS2144
Descriptor: N-tert-butoxy-N~2~-(5-methyl-1,2-oxazole-3-carbonyl)-L-asparaginyl-O-methyl-N-[(naphthalen-1-yl)methyl]-L-serinamide, Proteasome subunit alpha, Proteasome subunit beta
Authors:Hsu, H.-C, Fan, H, Singh, P.K, Wang, R, Sukenick, G, Nathan, C, Lin, G, Li, H.
Deposit date:2016-10-27
Release date:2017-01-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.083567 Å)
Cite:Structural Basis for the Species-Selective Binding of N,C-Capped Dipeptides to the Mycobacterium tuberculosis Proteasome.
Biochemistry, 56, 2017
5TRR
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BU of 5trr by Molmil
Structure of Mycobacterium tuberculosis proteasome in complex with N,C-capped dipeptide PKS2169
Descriptor: N,N-diethyl-N~2~-(3-phenylpropanoyl)-L-asparaginyl-N-[(naphthalen-1-yl)methyl]-L-alaninamide, Proteasome subunit alpha, Proteasome subunit beta
Authors:Hsu, H.-C, Fan, H, Singh, P.K, Wang, R, Sukenick, G, Nathan, C, Lin, G, Li, H.
Deposit date:2016-10-27
Release date:2017-01-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.103 Å)
Cite:Structural Basis for the Species-Selective Binding of N,C-Capped Dipeptides to the Mycobacterium tuberculosis Proteasome.
Biochemistry, 56, 2017
5TRY
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BU of 5try by Molmil
Structure of Mycobacterium tuberculosis proteasome in complex with N,C-capped dipeptide PKS2206
Descriptor: (2~{S})-~{N}-[(2~{S})-3-methoxy-1-(naphthalen-1-ylmethylamino)-1-oxidanylidene-propan-2-yl]-4-oxidanylidene-2-(3-phenylpropanoylamino)-4-piperidin-1-yl-butanamide, Proteasome subunit alpha, Proteasome subunit beta
Authors:Hsu, H.-C, Fan, H, Singh, P.K, Wang, R, Sukenick, G, Nathan, C, Lin, G, Li, H.
Deposit date:2016-10-27
Release date:2017-01-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.000008 Å)
Cite:Structural Basis for the Species-Selective Binding of N,C-Capped Dipeptides to the Mycobacterium tuberculosis Proteasome.
Biochemistry, 56, 2017
4FS8
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BU of 4fs8 by Molmil
The structure of an As(III) S-adenosylmethionine methyltransferase: insights into the mechanism of arsenic biotransformation
Descriptor: Arsenic methyltransferase, CALCIUM ION
Authors:Ajees, A.A, Marapakala, K, Packianathan, C, Sankaran, B, Rosen, B.P.
Deposit date:2012-06-27
Release date:2012-07-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structure of an As(III) S-Adenosylmethionine Methyltransferase: Insights into the Mechanism of Arsenic Biotransformation.
Biochemistry, 51, 2012
2RAO
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BU of 2rao by Molmil
X ray crystal structure of rabbit hemoglobin (oxy form) at 2.0 angstrom resolution
Descriptor: Hemoglobin subunit alpha-1/2, Hemoglobin subunit beta-1/2, OXYGEN MOLECULE, ...
Authors:Sundaresan, S, Packianathan, C, Neelagandan, K, Ponnuswamy, M.N.
Deposit date:2007-09-17
Release date:2008-09-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray crystal structure determination of hemoglobin from rabbit at 2.0 angstrom resloution
To be Published
2R80
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BU of 2r80 by Molmil
Pigeon Hemoglobin (OXY form)
Descriptor: Hemoglobin subunit alpha-A, Hemoglobin subunit beta, OXYGEN MOLECULE, ...
Authors:Ponnuswamy, M.N, Packianathan, C, Sundaresan, S, Neelagandan, K, Palani, K, Muller, J.J, Heinemann, U.
Deposit date:2007-09-10
Release date:2008-09-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:X-ray crystal structure analysis of Hemolgobin from Pigeon (Columba Livia) at 1.44 angstrom
To be Published
6J0E
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BU of 6j0e by Molmil
Structures of two ArsR As(III)-responsive repressors: implications for the mechanism of derepression
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ARSENIC, Arsenic responsive repressor ArsR
Authors:Prabaharan, C, Kandavelu, P, Packianathan, C, Rosen, P.B, Thiyagarajan, S.
Deposit date:2018-12-24
Release date:2019-07-03
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of two ArsR As(III)-responsive transcriptional repressors: Implications for the mechanism of derepression.
J.Struct.Biol., 207, 2019
6J05
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BU of 6j05 by Molmil
Structures of two ArsR As(III)-responsive repressors: implications for the mechanism of derepression
Descriptor: ARSENIC, SODIUM ION, Transcriptional regulator ArsR
Authors:Prabaharan, C, Kandavelu, P, Packianathan, C, Rosen, P.B, Thiyagarajan, S.
Deposit date:2018-12-21
Release date:2019-07-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structures of two ArsR As(III)-responsive transcriptional repressors: Implications for the mechanism of derepression.
J.Struct.Biol., 207, 2019
4FR0
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BU of 4fr0 by Molmil
ArsM arsenic(III) S-adenosylmethionine methyltransferase with SAM
Descriptor: Arsenic methyltransferase, S-ADENOSYLMETHIONINE
Authors:Ajees, A.A, Marapakala, K, Packianathan, C, Sankaran, B, Rosen, B.P.
Deposit date:2012-06-26
Release date:2012-07-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure of an As(III) S-Adenosylmethionine Methyltransferase: Insights into the Mechanism of Arsenic Biotransformation.
Biochemistry, 51, 2012
4FSD
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BU of 4fsd by Molmil
ArsM arsenic(III) S-adenosylmethionine methyltransferase with As(III)
Descriptor: ARSENIC, Arsenic methyltransferase, CALCIUM ION, ...
Authors:Ajees, A.A, Marapakala, K, Packianathan, C, Sankaran, B, Rosen, B.P.
Deposit date:2012-06-27
Release date:2012-07-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of an As(III) S-Adenosylmethionine Methyltransferase: Insights into the Mechanism of Arsenic Biotransformation.
Biochemistry, 51, 2012
3DHP
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BU of 3dhp by Molmil
Probing the role of aromatic residues at the secondary saccharide binding sites of human salivary alpha-amylase in substrate hydrolysis and bacterial binding
Descriptor: 4-amino-4,6-dideoxy-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 5-HYDROXYMETHYL-CHONDURITOL, Alpha-amylase 1, ...
Authors:Ragunath, C, Manuel, S.G.A, Sait, H.M, Kasinathan, C.
Deposit date:2008-06-18
Release date:2008-07-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Probing the role of aromatic residues
To be Published

222624

PDB entries from 2024-07-17

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