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PDB: 278 件
6C0Y
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Lysinoalanine synthase, DurN, from duramycin biosynthesis bound to duramycin
分子名称: CYS-LYS-GLN-DAL-CYS-ALA-PHE-GLY-PRO-PHE-DBB-PHE-VAL-CYS-BH2-GLY-ASN-DBB-LYS, Lysinoalanine synthase, POTASSIUM ION
著者Cogan, D.P, Nair, S.K.
登録日2018-01-03
公開日2018-09-05
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Substrate-assisted enzymatic formation of lysinoalanine in duramycin.
Nat. Chem. Biol., 14, 2018
6C9T
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Transcriptional repressor, CouR
分子名称: CouR
著者Cogan, D.P, Nair, S.K.
登録日2018-01-28
公開日2018-05-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Structural basis of transcriptional regulation by CouR, a repressor of coumarate catabolism, inRhodopseudomonas palustris.
J. Biol. Chem., 293, 2018
6C0H
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Lysinoalanine synthase, DurN, from duramycin biosynthesis bound to 1-Dha6Ala
分子名称: GLN-DAL-CYS-ALA-PHE-GLY-PRO-PHE-DBB-PHE-VAL-CYS-BH2-GLY, Lysinoalanine synthase, POTASSIUM ION
著者Cogan, D.P, Nair, S.K.
登録日2017-12-31
公開日2018-09-05
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Substrate-assisted enzymatic formation of lysinoalanine in duramycin.
Nat. Chem. Biol., 14, 2018
6C28
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Transcriptional repressor, CouR, bound to p-coumaroyl-CoA
分子名称: Transcriptional regulator, MarR family, p-coumaroyl-CoA
著者Cogan, D.P, Nair, S.K.
登録日2018-01-07
公開日2018-05-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structural basis of transcriptional regulation by CouR, a repressor of coumarate catabolism, inRhodopseudomonas palustris.
J. Biol. Chem., 293, 2018
6D6D
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BU of 6d6d by Molmil
The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 13
分子名称: 2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl 2-cyanobenzoate, Transcriptional activator protein LasR
著者Dong, S.H, Nair, S.K.
登録日2018-04-20
公開日2018-08-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR.
Cell Chem Biol, 25, 2018
6D6O
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The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 17
分子名称: 2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl octanoate, Transcriptional activator protein LasR
著者Dong, S.H, Nair, S.K.
登録日2018-04-21
公開日2018-08-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR.
Cell Chem Biol, 25, 2018
6D6B
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The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 11
分子名称: 2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl 2-nitrobenzoate, Transcriptional activator protein LasR
著者Dong, S.H, Nair, S.K.
登録日2018-04-20
公開日2018-08-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR.
Cell Chem Biol, 25, 2018
6D6C
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The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 12
分子名称: 2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl 2-methoxybenzoate, HISTIDINE, Transcriptional activator protein LasR
著者Dong, S.H, Nair, S.K.
登録日2018-04-20
公開日2018-08-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR.
Cell Chem Biol, 25, 2018
6D6P
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The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 19
分子名称: N-{[3,5-dibromo-2-(methoxymethoxy)phenyl]methyl}-2-nitrobenzamide, Transcriptional activator protein LasR
著者Dong, S.H, Nair, S.K.
登録日2018-04-21
公開日2018-08-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR.
Cell Chem Biol, 25, 2018
6D6L
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The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 14
分子名称: 2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl 4-chlorobenzoate, Transcriptional activator protein LasR
著者Dong, S.H, Nair, S.K.
登録日2018-04-21
公開日2018-08-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR.
Cell Chem Biol, 25, 2018
6C8S
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Loganic acid methyltransferase with SAH
分子名称: Loganic acid O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Petronikolou, N, Nair, S.K.
登録日2018-01-25
公開日2018-02-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Loganic Acid Methyltransferase: Insights into the Specificity of Methylation on an Iridoid Glycoside.
Chembiochem, 19, 2018
6D6N
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BU of 6d6n by Molmil
The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 16
分子名称: 2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl 4-methoxybenzoate, PHENYLALANINE, Transcriptional activator protein LasR
著者Dong, S.H, Nair, S.K.
登録日2018-04-21
公開日2018-08-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR.
Cell Chem Biol, 25, 2018
6D6M
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BU of 6d6m by Molmil
The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 15
分子名称: 2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl 4-bromobenzoate, Transcriptional activator protein LasR
著者Dong, S.H, Nair, S.K.
登録日2018-04-21
公開日2018-08-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR.
Cell Chem Biol, 25, 2018
6D6A
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The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 10
分子名称: 2,4-dibromo-6-{[(2-nitrobenzene-1-carbonyl)amino]methyl}phenyl benzoate, Transcriptional activator protein LasR
著者Dong, S.H, Nair, S.K.
登録日2018-04-20
公開日2018-08-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and Biochemical Studies of Non-native Agonists of the LasR Quorum-Sensing Receptor Reveal an L3 Loop "Out" Conformation for LasR.
Cell Chem Biol, 25, 2018
2A9I
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BU of 2a9i by Molmil
Molecular Structure of the Interleukin-1 Receptor-Associated Kinase-4 Death Domain
分子名称: Interleukin-1 receptor-associated kinase-4, MANGANESE (II) ION
著者Lasker, M.V, Gajjar, M.M, Nair, S.K.
登録日2005-07-11
公開日2005-10-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Cutting Edge: Molecular Structure of the IL-1R-Associated Kinase-4 Death Domain and Its Implications for TLR Signaling.
J.Immunol., 175, 2005
4ETX
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BU of 4etx by Molmil
Crystal Structure of PelD 158-CT from Pseudomonas aeruginosa PAO1
分子名称: PelD
著者Li, Z, Chen, J, Nair, S.K.
登録日2012-04-24
公開日2012-07-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of the PelD Cyclic Diguanylate Effector Involved in Pellicle Formation in Pseudomonas aeruginosa PAO1.
J.Biol.Chem., 287, 2012
4EUV
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Crystal Structure of PelD 158-CT from Pseudomonas aeruginosa PAO1, in complex with c-di-GMP, form 1
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), PelD
著者Li, Z, Chen, J, Nair, S.K.
登録日2012-04-25
公開日2012-07-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of the PelD Cyclic Diguanylate Effector Involved in Pellicle Formation in Pseudomonas aeruginosa PAO1.
J.Biol.Chem., 287, 2012
4ETW
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Structure of the Enzyme-ACP Substrate Gatekeeper Complex Required for Biotin Synthesis
分子名称: Acyl carrier protein, Pimelyl-[acyl-carrier protein] methyl ester esterase, methyl 7-{[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl]sulfanyl}-7-oxoheptanoate
著者Agarwal, V, Nair, S.K.
登録日2012-04-24
公開日2012-10-17
最終更新日2019-07-17
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure of the enzyme-acyl carrier protein (ACP) substrate gatekeeper complex required for biotin synthesis.
Proc.Natl.Acad.Sci.USA, 109, 2012
4EU0
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Crystal Structure of PelD 158-CT from Pseudomonas aeruginosa PAO1
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), PelD
著者Li, Z, Chen, J, Nair, S.K.
登録日2012-04-24
公開日2012-07-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structures of the PelD Cyclic Diguanylate Effector Involved in Pellicle Formation in Pseudomonas aeruginosa PAO1.
J.Biol.Chem., 287, 2012
4ETZ
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BU of 4etz by Molmil
Crystal Structure of PelD 158-CT from Pseudomonas aeruginosa PAO1
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), PelD
著者Li, Z, Chen, J, Nair, S.K.
登録日2012-04-24
公開日2012-07-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structures of the PelD Cyclic Diguanylate Effector Involved in Pellicle Formation in Pseudomonas aeruginosa PAO1.
J.Biol.Chem., 287, 2012
4G68
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Biochemical and structural insights into xylan utilization by the thermophilic bacteriumcaldanaerobius polysaccharolyticus
分子名称: ABC transporter, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-alpha-D-xylopyranose
著者Agarwal, V, Nair, S.K.
登録日2012-07-18
公開日2012-08-22
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Biochemical and Structural Insights into Xylan Utilization by the Thermophilic Bacterium Caldanaerobius polysaccharolyticus.
J.Biol.Chem., 287, 2012
4GLP
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BU of 4glp by Molmil
The crystal structure of soluble human CD14 reveals a bent solenoid with a hydrophobic amino-terminal pocket.
分子名称: Monocyte differentiation antigen CD14
著者Kelley, S.L, Lukk, T, Nair, S.K, Tapping, R.I.
登録日2012-08-14
公開日2012-12-26
最終更新日2021-05-26
実験手法X-RAY DIFFRACTION (4.002 Å)
主引用文献The Crystal Structure of Human Soluble CD14 Reveals a Bent Solenoid with a Hydrophobic Amino-Terminal Pocket.
J.Immunol., 190, 2013
5TXC
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AtxE2 Isopeptidase - APO
分子名称: AtxE2
著者Chekan, J.R, Nair, S.K.
登録日2016-11-16
公開日2016-12-21
最終更新日2017-01-04
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Structure of the Lasso Peptide Isopeptidase Identifies a Topology for Processing Threaded Substrates.
J. Am. Chem. Soc., 138, 2016
5UAO
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Crystal structure of MibH, a lathipeptide tryptophan 5-halogenase
分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Tryptophane-5-halogenase
著者Cogan, D.P, Nair, S.K.
登録日2016-12-19
公開日2017-01-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Two Flavoenzymes Catalyze the Post-Translational Generation of 5-Chlorotryptophan and 2-Aminovinyl-Cysteine during NAI-107 Biosynthesis.
ACS Chem. Biol., 12, 2017
5TU6
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PagF prenyltransferase with cyclic[INPYLYP] and DMSPP
分子名称: DIMETHYLALLYL S-THIOLODIPHOSPHATE, MAGNESIUM ION, METHIONINE, ...
著者Hao, Y, Nair, S.K.
登録日2016-11-04
公開日2016-11-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Molecular basis for the broad substrate selectivity of a peptide prenyltransferase.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016

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