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PDB: 282 件
6XP8
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The crystal structure of TfuA involved in peptide backbone thioamidation from Methanosarcina acetivorans
分子名称: TfuA domain-containing protein
著者Dong, S.-H, Nair, S.K.
登録日2020-07-08
公開日2021-03-17
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Functional elucidation of TfuA in peptide backbone thioamidation.
Nat.Chem.Biol., 17, 2021
6E6Y
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Dieckmann cyclase, NcmC
分子名称: Dieckmann cyclase, NcmC, SULFATE ION
著者Cogan, D.P, Nair, S.K.
登録日2018-07-25
公開日2019-07-31
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Basis for Enzymatic Off-Loading of Hybrid Polyketides by Dieckmann Condensation.
Acs Chem.Biol., 2020
6EC7
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Glutamylation domain, TbtB, from thiomuracin biosynthesis
分子名称: Lantibiotic dehydratase domain protein
著者Cogan, D.P, Nair, S.K.
登録日2018-08-07
公開日2019-08-14
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Characterization of glutamyl-tRNA-dependent dehydratases using nonreactive substrate mimics.
Proc.Natl.Acad.Sci.USA, 116, 2019
4ETZ
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Crystal Structure of PelD 158-CT from Pseudomonas aeruginosa PAO1
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), PelD
著者Li, Z, Chen, J, Nair, S.K.
登録日2012-04-24
公開日2012-07-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structures of the PelD Cyclic Diguanylate Effector Involved in Pellicle Formation in Pseudomonas aeruginosa PAO1.
J.Biol.Chem., 287, 2012
3TLB
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Microcin C7 self immunity protein MccF in complex aspartyl sulfamoyl adenosine
分子名称: 5'-O-(L-alpha-aspartylsulfamoyl)adenosine, MccF
著者Agarwal, V, Nair, S.K.
登録日2011-08-29
公開日2012-02-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.501 Å)
主引用文献Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7.
Proc.Natl.Acad.Sci.USA, 109, 2012
3TLA
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Microcin C7 self immunity protein MccF in the wild type APO state
分子名称: 1,2-ETHANEDIOL, MccF
著者Agarwal, V, Nair, S.K.
登録日2011-08-29
公開日2012-02-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.201 Å)
主引用文献Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7.
Proc.Natl.Acad.Sci.USA, 109, 2012
3TLZ
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Microcin C7 self immunity protein MccF mutant W186F in complex with Adenosine Monophosphate
分子名称: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, MccF
著者Agarwal, V, Nair, S.K.
登録日2011-08-30
公開日2012-02-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7.
Proc.Natl.Acad.Sci.USA, 109, 2012
4WD9
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Crystal structure of tRNA-dependent lantibiotic dehydratase NisB in complex with NisA leader peptide
分子名称: Nisin biosynthesis protein NisB
著者Hao, Y, Nair, S.K.
登録日2014-09-08
公開日2014-10-29
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure and mechanism of the tRNA-dependent lantibiotic dehydratase NisB.
Nature, 517, 2015
6OM4
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The structure of Microcin C7 biosynthetic enzyme MccB in complex with N-formylated MccA
分子名称: 5'-O-[(S)-amino(hydroxy)phosphoryl]adenosine, MAGNESIUM ION, MccB protein, ...
著者Dong, S.-H, Nair, S.K.
登録日2019-04-18
公開日2019-05-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Biosynthesis of the RiPP trojan horse nucleotide antibiotic microcin C is directed by theN-formyl of the peptide precursor.
Chem Sci, 10, 2019
6PEU
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Structure of YcaO enzyme from Methanocaldococcus jannaschii in complex with peptide
分子名称: ADENOSINE-5'-TRIPHOSPHATE, GLY-ARG-LEU-GLY-PHE-TYR-GLY-TYR-ASP-LEU-GLN-ASP, MAGNESIUM ION, ...
著者Dong, S.-H, Nair, S.K.
登録日2019-06-20
公開日2019-11-06
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Mechanistic Basis for Ribosomal Peptide Backbone Modifications.
Acs Cent.Sci., 5, 2019
8CZL
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Human LanCL1 bound to methyl glutathione (MeGSH)
分子名称: Glutathione S-transferase LANCL1, L-GAMMA-GLUTAMYL-S-METHYLCYSTEINYLGLYCINE, ZINC ION
著者Ongpipattanakul, C, Nair, S.K.
登録日2022-05-24
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献The mechanism of thia-Michael addition catalyzed by LanC enzymes.
Proc.Natl.Acad.Sci.USA, 120, 2023
8CZK
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Human LanCL1 bound to GSH and Dhb-Erk peptide
分子名称: Deb-Erk peptide, GLUTATHIONE, Glutathione S-transferase LANCL1, ...
著者Ongpipattanakul, C, Nair, S.K.
登録日2022-05-24
公開日2023-01-25
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献The mechanism of thia-Michael addition catalyzed by LanC enzymes.
Proc.Natl.Acad.Sci.USA, 120, 2023
8D0V
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Human LanCL1 C264A mutant bound to GSH
分子名称: GLUTATHIONE, Glutathione S-transferase LANCL1, ZINC ION
著者Ongpipattanakul, C, Nair, S.K.
登録日2022-05-26
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献The mechanism of thia-Michael addition catalyzed by LanC enzymes.
Proc.Natl.Acad.Sci.USA, 120, 2023
8D19
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Human LanCL1 bound to GSH
分子名称: GLUTATHIONE, Glutathione S-transferase LANCL1, ZINC ION
著者Ongpipattanakul, C, Nair, S.K.
登録日2022-05-26
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献The mechanism of thia-Michael addition catalyzed by LanC enzymes.
Proc.Natl.Acad.Sci.USA, 120, 2023
6PE3
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Structure of YcaO enzyme from Methanocaldococcus jannaschii in complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Uncharacterized protein MJ1094
著者Dong, S.-H, Nair, S.K.
登録日2019-06-19
公開日2020-01-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Mechanistic Basis for Ribosomal Peptide Backbone Modifications.
Acs Cent.Sci., 5, 2019
6E6T
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Dieckmann cyclase, NcmC, bound to cerulenin
分子名称: (4S,5R)-4,5-dihydroxy-5-[(3E,6E)-octa-3,6-dien-1-yl]pyrrolidin-2-one, NcmC, SULFATE ION
著者Cogan, D.P, Nair, S.K.
登録日2018-07-25
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Basis for Enzymatic Off-Loading of Hybrid Polyketides by Dieckmann Condensation.
Acs Chem.Biol., 2020
8SAP
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Crystal structure of class III lanthipeptide synthetase ThurKC
分子名称: Class III lanthionine synthetase LanKC
著者Hernandez Garcia, A, Nair, S.K.
登録日2023-04-01
公開日2023-10-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Structure and Function of a Class III Metal-Independent Lanthipeptide Synthetase.
Acs Cent.Sci., 9, 2023
8SAM
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Crystal structure of class III lanthipeptide synthetase LP-GS-ThurKC in complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Class III lanthipeptide, ...
著者Hernandez Garcia, A, Nair, S.K.
登録日2023-04-01
公開日2023-10-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure and Function of a Class III Metal-Independent Lanthipeptide Synthetase.
Acs Cent.Sci., 9, 2023
8SAO
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Crystal structure of class III lanthipeptide synthetase ThurKC in complex with ThurA1 leader peptide
分子名称: Class III lanthionine synthetase LanKC, Class III lanthipeptide
著者Hernandez Garcia, A, Nair, S.K.
登録日2023-04-01
公開日2023-11-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献Structure and Function of a Class III Metal-Independent Lanthipeptide Synthetase.
Acs Cent.Sci., 9, 2023
6E6U
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Variant C89S of Dieckmann cyclase, NcmC
分子名称: Dieckmann cyclase, NcmC, SULFATE ION
著者Cogan, D.P, Nair, S.K.
登録日2018-07-25
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural Basis for Enzymatic Off-Loading of Hybrid Polyketides by Dieckmann Condensation.
Acs Chem.Biol., 2020
6EC8
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BU of 6ec8 by Molmil
Glutamylation domain, TbtB, from thiomuracin biosynthesis bound to 5'-phosphodesmethylglutamycin
分子名称: 3'-deoxy-3'-[(L-alpha-glutamyl)amino]adenosine 5'-(dihydrogen phosphate), Lantibiotic dehydratase domain protein
著者Cogan, D.P, Nair, S.K.
登録日2018-08-07
公開日2019-06-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.148 Å)
主引用文献Characterization of glutamyl-tRNA-dependent dehydratases using nonreactive substrate mimics.
Proc.Natl.Acad.Sci.USA, 116, 2019
8CWX
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NMR structure of a Stapled Lanthipeptide Natural Product
分子名称: Lanthipeptide Natural Product mSmoAc
著者Pei, Z, Zhu, L, Nair, S.K.
登録日2022-05-19
公開日2022-10-12
実験手法SOLUTION NMR
主引用文献Class V Lanthipeptide Cyclase Directs the Biosynthesis of a Stapled Peptide Natural Product.
J.Am.Chem.Soc., 144, 2022
8F5M
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Crystal structure of P74 gp62
分子名称: Envelope glycoprotein gp62, MAGNESIUM ION
著者Bae, B, Nair, S.K.
登録日2022-11-14
公開日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Tail-tape-fused virion and non-virion RNA polymerases of a thermophilic virus with an extremely long tail.
Nat Commun, 15, 2024
6M78
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Aromatic interactions drive the coupled folding and binding of the intrinsically disordered Sesbania mosaic virus VPg protein
分子名称: Polyprotein
著者Dixit, K, Karanth, N.M, Nair, S, Kumari, K, Chakraborti, K.S, Savithri, H.S, Sarma, S.P.
登録日2020-03-17
公開日2021-01-27
実験手法SOLUTION NMR
主引用文献Aromatic Interactions Drive the Coupled Folding and Binding of the Intrinsically Disordered Sesbania mosaic Virus VPg Protein.
Biochemistry, 59, 2020
6LXF
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Aromatic interactions drive the coupled folding and binding of the intrinsically disordered Sesbania mosaic virus VPg protein.
分子名称: Polyprotein
著者Dixit, K, Karanth, N.M, Nair, S, Kumari, K, Chakrabarti, K.S, Savithri, H.S, Sarma, S.P.
登録日2020-02-11
公開日2021-01-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Aromatic Interactions Drive the Coupled Folding and Binding of the Intrinsically Disordered Sesbania mosaic Virus VPg Protein.
Biochemistry, 59, 2020

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