Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17170 results

1FW2
DownloadVisualize
BU of 1fw2 by Molmil
OUTER MEMBRANE PHOSPHOLIPASE A FROM ESCHERICHIA COLI
Descriptor: CALCIUM ION, OUTER MEMBRANE PHOSPHOLIPASE A
Authors:Snijder, H.J, Kingma, R.L, Kalk, K.H, Dekker, N, Egmond, M.R, Dijkstra, B.W.
Deposit date:2000-09-21
Release date:2001-06-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural investigations of calcium binding and its role in activity and activation of outer membrane phospholipase A from Escherichia coli.
J.Mol.Biol., 309, 2001
2G8G
DownloadVisualize
BU of 2g8g by Molmil
Structurally mapping the diverse phenotype of Adeno-Associated Virus serotype 4
Descriptor: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, Capsid
Authors:Govindasamy, L, Padron, E, McKenna, R, Muzyczka, N, Chiorini, J.A, Agbandje-McKenna, M.
Deposit date:2006-03-02
Release date:2007-01-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structurally mapping the diverse phenotype of adeno-associated virus serotype 4.
J.Virol., 80, 2006
6HU9
DownloadVisualize
BU of 6hu9 by Molmil
III2-IV2 mitochondrial respiratory supercomplex from S. cerevisiae
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE, 5-(3,7,11,15,19,23-HEXAMETHYL-TETRACOSA-2,6,10,14,18,22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZENE-1,4-DIOL, CALCIUM ION, ...
Authors:Hartley, A.M, Pinotsis, N, Marechal, A.
Deposit date:2018-10-05
Release date:2018-12-26
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Structure of yeast cytochrome c oxidase in a supercomplex with cytochrome bc1.
Nat. Struct. Mol. Biol., 26, 2019
5EUI
DownloadVisualize
BU of 5eui by Molmil
Structure of predicted ancestral pika hemoglobin
Descriptor: HBA protein, HBB protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Inoguchi, N, Chandrasekhar, N, Storz, J.F, Moriyama, H.
Deposit date:2015-11-18
Release date:2016-11-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:structure of predicted pika ancestral hemoglobin at 1.45 Angstroms resolution.
To Be Published
1LAN
DownloadVisualize
BU of 1lan by Molmil
LEUCINE AMINOPEPTIDASE COMPLEX WITH L-LEUCINAL
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, LEUCINE, LEUCINE AMINOPEPTIDASE, ...
Authors:Straeter, N, Lipscomb, W.N.
Deposit date:1995-08-11
Release date:1995-10-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Two-metal ion mechanism of bovine lens leucine aminopeptidase: active site solvent structure and binding mode of L-leucinal, a gem-diolate transition state analogue, by X-ray crystallography.
Biochemistry, 34, 1995
6TTA
DownloadVisualize
BU of 6tta by Molmil
Haddock model of NDM-1/quercetin complex
Descriptor: 3,5,7,3',4'-PENTAHYDROXYFLAVONE, Metallo beta lactamase NDM-1, ZINC ION
Authors:Riviere, G, Oueslati, S, Gayral, M, Crechet, J.B, Nhiri, N, Jacquet, E, Cintrat, J.C, Giraud, F, van Heijenoort, C, Lescop, E, Pethe, S, Iorga, B.I, Naas, T, Guittet, E, Morellet, N.
Deposit date:2019-12-26
Release date:2021-01-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Characterization of the Influence of Zinc(II) Ions on the Structural and Dynamic Behavior of the New Delhi Metallo-beta-Lactamase-1 and on the Binding with Flavonols as Inhibitors.
Acs Omega, 5, 2020
5CSM
DownloadVisualize
BU of 5csm by Molmil
YEAST CHORISMATE MUTASE, T226S MUTANT, COMPLEX WITH TRP
Descriptor: CHORISMATE MUTASE, TRYPTOPHAN
Authors:Straeter, N, Schnappauf, G, Braus, G, Lipscomb, W.N.
Deposit date:1997-07-14
Release date:1998-01-14
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanisms of catalysis and allosteric regulation of yeast chorismate mutase from crystal structures.
Structure, 5, 1997
5O42
DownloadVisualize
BU of 5o42 by Molmil
17beta-hydroxysteroid dehydrogenase 14 variant T205 in complex with a non-steroidal 2,6-pyridinketone inhibitor.
Descriptor: 17-beta-hydroxysteroid dehydrogenase 14, 2-fluoranyl-3-[6-[1-(4-fluoranyl-3-oxidanyl-phenyl)ethenyl]pyridin-2-yl]phenol, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Bertoletti, N, Heine, A, Braun, F, Klebe, G, Marchais-Oberwinkler, S.
Deposit date:2017-05-25
Release date:2018-06-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structure-based design and profiling of novel 17 beta-HSD14 inhibitors.
Eur J Med Chem, 155, 2018
1E99
DownloadVisualize
BU of 1e99 by Molmil
Human thymidylate kinase complexed with AZTMP and ADP
Descriptor: 3'-AZIDO-3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Ostermann, N, Lavie, A, Padiyar, S, Brundiers, R, Veit, T, Reinstein, J, Goody, R.S, Konrad, M, Schlichting, I.
Deposit date:2000-10-10
Release date:2001-10-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Potentiating Azt Activation: Structures of Wildtype and Mutant Human Thymidylate Kinase Suggest Reasons for the Mutants' Improved Kinetics with the HIV Prodrug Metabolite Aztmp
J.Mol.Biol., 304, 2000
2WZZ
DownloadVisualize
BU of 2wzz by Molmil
AMP-C BETA-LACTAMASE (PSEUDOMONAS AERUGINOSA)IN COMPLEX WITH compound M-03
Descriptor: (3R)-1-[(4R)-AZEPAN-4-YLCARBAMOYL]-3-(SULFOAMINO)-L-PROLINE, BETA-LACTAMASE, CHLORIDE ION
Authors:Fitzgerald, P.M.D, Sharma, N, Lu, J.
Deposit date:2009-12-03
Release date:2010-01-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Side Chain Sar of Bicyclic Beta-Lactamase Inhibitors (Blis). 1. Discovery of a Class C Bli for Combination with Imipinem.
Bioorg.Med.Chem.Lett., 20, 2010
5O72
DownloadVisualize
BU of 5o72 by Molmil
17beta-hydroxysteroid dehydrogenase 14 variant T205 in complex with a non-steroidal quinoline based inhibitor
Descriptor: 17-beta-hydroxysteroid dehydrogenase 14, 2-azanyl-~{N}-[2-(4-fluoranyl-3-oxidanyl-phenyl)carbonylquinolin-7-yl]ethanamide, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Bertoletti, N, Braun, F, Heine, A, Klebe, G, Marchais-Oberwinkler, S.
Deposit date:2017-06-07
Release date:2018-06-06
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structure-based design and profiling of novel 17 beta-HSD14 inhibitors.
Eur J Med Chem, 155, 2018
5AX9
DownloadVisualize
BU of 5ax9 by Molmil
Crystal structure of the kinase domain of human TRAF2 and NCK-interacting protein kinase in complex with compund 9
Descriptor: 4-methoxy-3-[2-[(3-methoxy-4-morpholin-4-yl-phenyl)amino]pyridin-4-yl]benzenecarbonitrile, SULFATE ION, TRAF2 and NCK-interacting protein kinase
Authors:Ohbayashi, N, Kukimoto-Niino, M, Yamada, T, Shirouzu, M.
Deposit date:2015-07-21
Release date:2016-07-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:TNIK inhibition abrogates colorectal cancer stemness
Nat Commun, 7, 2016
1LAM
DownloadVisualize
BU of 1lam by Molmil
LEUCINE AMINOPEPTIDASE (UNLIGATED)
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, CARBONATE ION, LEUCINE AMINOPEPTIDASE, ...
Authors:Straeter, N, Lipscomb, W.N.
Deposit date:1995-08-11
Release date:1995-10-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Two-metal ion mechanism of bovine lens leucine aminopeptidase: active site solvent structure and binding mode of L-leucinal, a gem-diolate transition state analogue, by X-ray crystallography.
Biochemistry, 34, 1995
5X7S
DownloadVisualize
BU of 5x7s by Molmil
Crystal structure of Paenibacillus sp. 598K alpha-1,6-glucosyltransferase, terbium derivative
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Fujimoto, Z, Kishine, N, Suzuki, N, Momma, M, Ichinose, H, Kimura, A, Funane, K.
Deposit date:2017-02-27
Release date:2017-07-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Carbohydrate-binding architecture of the multi-modular alpha-1,6-glucosyltransferase from Paenibacillus sp. 598K, which produces alpha-1,6-glucosyl-alpha-glucosaccharides from starch
Biochem. J., 474, 2017
2JSW
DownloadVisualize
BU of 2jsw by Molmil
Solution Structure of the R13 Domain of Talin
Descriptor: Talin-1
Authors:Goult, B.T, Gingras, A.R, Bate, N, Critchley, D.R.C, Barsukov, I.L.
Deposit date:2007-07-17
Release date:2008-01-29
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The structure of the C-terminal actin-binding domain of talin.
Embo J., 27, 2007
5AYF
DownloadVisualize
BU of 5ayf by Molmil
Crystal structure of SET7/9 in complex with cyproheptadine
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(dibenzo[1,2-a:2',1'-d][7]annulen-11-ylidene)-1-methyl-piperidine, Histone-lysine N-methyltransferase SETD7, ...
Authors:Niwa, H, Handa, N, Takemoto, Y, Ito, A, Tomabechi, Y, Umehara, T, Shirouzu, M, Yoshida, M, Yokoyama, S.
Deposit date:2015-08-20
Release date:2016-04-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.005 Å)
Cite:Identification of Cyproheptadine as an Inhibitor of SET Domain Containing Lysine Methyltransferase 7/9 (Set7/9) That Regulates Estrogen-Dependent Transcription
J.Med.Chem., 59, 2016
5APN
DownloadVisualize
BU of 5apn by Molmil
Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1
Descriptor: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Greber, B.J, Gerhardy, S, Leitner, A, Leibundgut, M, Salem, M, Boehringer, D, Leulliot, N, Aebersold, R, Panse, V.G, Ban, V.
Deposit date:2015-09-17
Release date:2015-12-16
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.91 Å)
Cite:Insertion of the Biogenesis Factor Rei1 Probes the Ribosomal Tunnel during 60S Maturation.
Cell, 164, 2015
5B7E
DownloadVisualize
BU of 5b7e by Molmil
Structure of perdeuterated CueO
Descriptor: Blue copper oxidase CueO, COPPER (II) ION, CU-O-CU LINKAGE, ...
Authors:Akter, M, Higuchi, Y, Shibata, N.
Deposit date:2016-06-07
Release date:2016-10-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Biochemical, spectroscopic and X-ray structural analysis of deuterated multicopper oxidase CueO prepared from a new expression construct for neutron crystallography
Acta Crystallogr.,Sect.F, 72, 2016
5B7F
DownloadVisualize
BU of 5b7f by Molmil
Structure of CueO - the signal peptide was truncated by HRV3C protease
Descriptor: 1,2-ETHANEDIOL, Blue copper oxidase CueO, CALCIUM ION, ...
Authors:Akter, M, Higuchi, Y, Shibata, N.
Deposit date:2016-06-07
Release date:2016-10-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Biochemical, spectroscopic and X-ray structural analysis of deuterated multicopper oxidase CueO prepared from a new expression construct for neutron crystallography
Acta Crystallogr.,Sect.F, 72, 2016
5B7M
DownloadVisualize
BU of 5b7m by Molmil
Structure of perdeuterated CueO - the signal peptide was truncated by HRV3C protease
Descriptor: Blue copper oxidase CueO, COPPER (II) ION
Authors:Akter, M, Higuchi, Y, Shibata, N.
Deposit date:2016-06-07
Release date:2016-10-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Biochemical, spectroscopic and X-ray structural analysis of deuterated multicopper oxidase CueO prepared from a new expression construct for neutron crystallography
Acta Crystallogr.,Sect.F, 72, 2016
5X7Q
DownloadVisualize
BU of 5x7q by Molmil
Crystal structure of Paenibacillus sp. 598K alpha-1,6-glucosyltransferase complexed with maltohexaose
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Fujimoto, Z, Kishine, N, Suzuki, N, Momma, M, Ichinose, H, Kimura, A, Funane, K.
Deposit date:2017-02-27
Release date:2017-07-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Carbohydrate-binding architecture of the multi-modular alpha-1,6-glucosyltransferase from Paenibacillus sp. 598K, which produces alpha-1,6-glucosyl-alpha-glucosaccharides from starch
Biochem. J., 474, 2017
1E9E
DownloadVisualize
BU of 1e9e by Molmil
Mutant human thymidylate kinase (F105Y) complexed with dTMP and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, THYMIDINE-5'-PHOSPHATE, ...
Authors:Ostermann, N, Lavie, A, Padiyar, S, Brundiers, R, Veit, T, Reintein, J, Goody, R.S, Konrad, M, Schlichting, I.
Deposit date:2000-10-11
Release date:2001-10-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Potentiating Azt Activation: Structures of Wildtype and Mutant Human Thymidylate Kinase Suggest Reasons for the Mutants' Improved Kinetics with the HIV Prodrug Metabolite Aztmp
J.Mol.Biol., 304, 2000
1E9D
DownloadVisualize
BU of 1e9d by Molmil
Mutant human thymidylate kinase (F105Y) complexed with AZTMP and ADP
Descriptor: 3'-AZIDO-3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Ostermann, N, Lavie, A, Padiyar, S, Brundiers, R, Veit, T, Reintein, J, Goody, R.S, Konrad, M, Schlichting, I.
Deposit date:2000-10-10
Release date:2001-10-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Potentiating Azt Activation: Structures of Wildtype and Mutant Human Thymidylate Kinase Suggest Reasons for the Mutants' Improved Kinetics with the HIV Prodrug Metabolite Aztmp
J.Mol.Biol., 304, 2000
1E98
DownloadVisualize
BU of 1e98 by Molmil
Wild type human thymidylate kinase complexed with AZTMP and ADP
Descriptor: 3'-AZIDO-3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Ostermann, N, Lavie, A, Padiyar, S, Brundiers, R, Veit, T, Reintein, J, Goody, R.S, Konrad, M, Schlichting, I.
Deposit date:2000-10-10
Release date:2001-10-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Potentiating Azt Activation: Structures of Wildtype and Mutant Human Thymidylate Kinase Suggest Reasons for the Mutants' Improved Kinetics with the HIV Prodrug Metabolite Aztmp
J.Mol.Biol., 304, 2000
1E9F
DownloadVisualize
BU of 1e9f by Molmil
Mutant human thymidylate kinase complexed with TMP and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, THYMIDINE-5'-PHOSPHATE, ...
Authors:Ostermann, N, Lavie, A, Padiyar, S, Brundiers, R, Veit, T, Reinstein, J, Goody, R.S, Konrad, M, Schlichting, I.
Deposit date:2000-10-11
Release date:2001-10-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Potentiating Azt Activation: Structures of Wildtype and Mutant Human Thymidylate Kinase Suggest Reasons for the Mutants' Improved Kinetics with the HIV Prodrug Metabolite Aztmp
J.Mol.Biol., 304, 2000

226707

數據於2024-10-30公開中

PDB statisticsPDBj update infoContact PDBjnumon