Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17170 results

8WA2
DownloadVisualize
BU of 8wa2 by Molmil
cryo-EM structure of native mastigonemes isolated from Chlamydomonas reinhardtii at 3.0 angstrom resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Huang, J, Tao, H, Chen, J, Pan, J, Yan, C, Yan, N.
Deposit date:2023-09-06
Release date:2024-04-10
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure-guided discovery of protein and glycan components in native mastigonemes.
Cell, 187, 2024
6SHI
DownloadVisualize
BU of 6shi by Molmil
Human kallikrein 7 with aromatic coumarinic ester compound 2 covalently bound to H57
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 6-methyl-2-oxidanylidene-chromene-3-carboxylic acid, Kallikrein-7, ...
Authors:Hanke, S, Straeter, N.
Deposit date:2019-08-06
Release date:2020-05-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Studies on the Inhibitory Binding Mode of Aromatic Coumarinic Esters to Human Kallikrein-Related Peptidase 7.
J.Med.Chem., 63, 2020
8WCQ
DownloadVisualize
BU of 8wcq by Molmil
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 4 in intermediate state
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CHLORIDE ION, Proton-gated ion channel
Authors:Bharambe, N, Li, Z, Basak, S.
Deposit date:2023-09-13
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Cryo-EM structures of prokaryotic ligand-gated ion channel GLIC provide insights into gating in a lipid environment.
Nat Commun, 15, 2024
6D2X
DownloadVisualize
BU of 6d2x by Molmil
Crystal structure of the GH26 domain from PbGH26-GH5A endo-beta-mannanase/endo-beta-glucanase from Prevotella bryantii
Descriptor: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, Aryl-phospho-beta-D-glucosidase BglC, GH1 family, ...
Authors:Stogios, P.J, Skarina, T, McGregor, N, Di Leo, R, Brumer, H, Savchenko, A.
Deposit date:2018-04-14
Release date:2019-10-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal structure of the GH26 domain from PbGH26-GH5A endo-beta-mannanase/endo-beta-glucanase from Prevotella bryantii
To Be Published
8W15
DownloadVisualize
BU of 8w15 by Molmil
HTT in complex with HAP40 in the apo state.
Descriptor: 40-kDa huntingtin-associated protein, Huntingtin
Authors:Poweleit, N, Boudet, J, Doherty, E.
Deposit date:2024-02-15
Release date:2024-03-13
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Discovery of a Small Molecule Ligand to the Huntingtin/HAP40 complex
To Be Published
2MWQ
DownloadVisualize
BU of 2mwq by Molmil
Solution structure of PsbQ from spinacia oleracea
Descriptor: Oxygen-evolving enhancer protein 3, chloroplastic
Authors:Rathner, P, Mueller, N, Wimmer, R, Chandra, K.
Deposit date:2014-11-19
Release date:2015-07-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR and molecular dynamics reveal a persistent alpha helix within the dynamic region of PsbQ from photosystem II of higher plants.
Proteins, 83, 2015
6CMC
DownloadVisualize
BU of 6cmc by Molmil
Barium sites in the structure of a desensitized acid sensing ion channel
Descriptor: Acid-sensing ion channel 1, CHLORIDE ION
Authors:Yoder, N, Gouaux, E.
Deposit date:2018-03-03
Release date:2018-08-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.671 Å)
Cite:Divalent cation and chloride ion sites of chicken acid sensing ion channel 1a elucidated by x-ray crystallography.
PLoS ONE, 13, 2018
7JXC
DownloadVisualize
BU of 7jxc by Molmil
Mapping neutralizing and immunodominant sites on the SARS-CoV-2 spike receptor-binding domain by structure-guided high-resolution serology
Descriptor: NONAETHYLENE GLYCOL, S2H14 antigen-binding (Fab) fragment
Authors:Park, Y.J, Tortorici, M.A, Walls, A.C, Czudnochowski, N, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G, Veesler, D.
Deposit date:2020-08-27
Release date:2020-10-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Mapping Neutralizing and Immunodominant Sites on the SARS-CoV-2 Spike Receptor-Binding Domain by Structure-Guided High-Resolution Serology.
Cell, 183, 2020
8WCR
DownloadVisualize
BU of 8wcr by Molmil
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 4 in open state
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CHLORIDE ION, Proton-gated ion channel
Authors:Bharambe, N, Li, Z, Basak, S.
Deposit date:2023-09-13
Release date:2024-04-17
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:Cryo-EM structures of prokaryotic ligand-gated ion channel GLIC provide insights into gating in a lipid environment.
Nat Commun, 15, 2024
6SHJ
DownloadVisualize
BU of 6shj by Molmil
Escherichia coli AGPase in complex with FBP. Symmetry applied C2
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, Glucose-1-phosphate adenylyltransferase
Authors:Cifuente, J.O, Comino, N, D'Angelo, C, Marina, A, Gil-Carton, D, Albesa-Jove, D, Guerin, M.E.
Deposit date:2019-08-07
Release date:2020-02-05
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:The allosteric control mechanism of bacterial glycogen biosynthesis disclosed by cryoEM.
Curr Res Struct Biol, 2, 2020
6CIH
DownloadVisualize
BU of 6cih by Molmil
Crystal structure of a group II intron lariat in the post-catalytic state
Descriptor: IRIDIUM HEXAMMINE ION, MAGNESIUM ION, RNA (5'-R(P*UP*GP*UP*UP*UP*AP*UP*UP*AP*AP*AP*AP*AP*C*-3'), ...
Authors:Chan, R.T, Peters, J.K, Robart, A.R, Wiryaman, T, Rajashankar, K.R, Toor, N.
Deposit date:2018-02-23
Release date:2018-11-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.676 Å)
Cite:Structural basis for the second step of group II intron splicing.
Nat Commun, 9, 2018
6CRX
DownloadVisualize
BU of 6crx by Molmil
SARS Spike Glycoprotein, Stabilized variant, two S1 CTDs in the upwards conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,Fibritin, ...
Authors:Kirchdoerfer, R.N, Wang, N, Pallesen, J, Turner, H.L, Cottrell, C.A, McLellan, J.S, Ward, A.B.
Deposit date:2018-03-19
Release date:2018-04-11
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Stabilized coronavirus spikes are resistant to conformational changes induced by receptor recognition or proteolysis.
Sci Rep, 8, 2018
6CUL
DownloadVisualize
BU of 6cul by Molmil
PvdF of pyoverdin biosynthesis is a structurally unique N10-formyltetrahydrofolate-dependent formyltransferase
Descriptor: CITRIC ACID, N-(4-{[(2-amino-4-oxo-1,4-dihydroquinazolin-6-yl)methyl]amino}benzene-1-carbonyl)-D-glutamic acid, Pyoverdine synthetase F
Authors:Kenjic, N, Hoag, M.R, Moraski, G.C, Caperelli, C.A, Moran, G.R, Lamb, A.L.
Deposit date:2018-03-26
Release date:2019-02-06
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:PvdF of pyoverdin biosynthesis is a structurally unique N10-formyltetrahydrofolate-dependent formyltransferase.
Arch. Biochem. Biophys., 664, 2019
8VI4
DownloadVisualize
BU of 8vi4 by Molmil
TehA from Haemophilus influenzae purified in LMNG
Descriptor: Tellurite resistance protein TehA homolog
Authors:Catalano, C, Senko, S, Tran, N.L, Lucier, K.W, Farwell, A.C, Silva, M.S, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2024-01-03
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:High-Resolution Cryo-Electron Microscopy Structure Determination of Haemophilus influenzae Tellurite-Resistance Protein A via 200 kV Transmission Electron Microscopy.
Int J Mol Sci, 25, 2024
8VSP
DownloadVisualize
BU of 8vsp by Molmil
Cryo-EM structure of human invariant chain in complex with HLA-DQ
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HLA class II histocompatibility antigen gamma chain, HLA class II histocompatibility antigen, ...
Authors:Wang, N, Caveney, N.A, Jude, K.M, Garcia, K.C.
Deposit date:2024-01-24
Release date:2024-05-08
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Structural insights into human MHC-II association with invariant chain.
Proc.Natl.Acad.Sci.USA, 121, 2024
6S8E
DownloadVisualize
BU of 6s8e by Molmil
Cryo-EM structure of the type III-B Cmr-beta complex bound to non-cognate target RNA
Descriptor: CRISPR-associated RAMP protein, Cmr4 family, Cmr6 family, ...
Authors:Sofos, N, Montoya, G, Stella, S.
Deposit date:2019-07-09
Release date:2020-07-08
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structures of the Cmr-beta Complex Reveal the Regulation of the Immunity Mechanism of Type III-B CRISPR-Cas.
Mol.Cell, 79, 2020
8VI5
DownloadVisualize
BU of 8vi5 by Molmil
TehA from Haemophilus influenzae purified in OG
Descriptor: Tellurite resistance protein TehA homolog
Authors:Catalano, C, Senko, S, Tran, N.L, Lucier, K.W, Farwell, A.C, Silva, M.S, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2024-01-03
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:High-Resolution Cryo-Electron Microscopy Structure Determination of Haemophilus influenzae Tellurite-Resistance Protein A via 200 kV Transmission Electron Microscopy.
Int J Mol Sci, 25, 2024
8VI3
DownloadVisualize
BU of 8vi3 by Molmil
TehA from Haemophilus influenzae purified in GDN
Descriptor: Tellurite resistance protein TehA homolog
Authors:Catalano, C, Senko, S, Tran, N.L, Lucier, K.W, Farwell, A.C, Silva, M.S, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2024-01-03
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:High-Resolution Cryo-Electron Microscopy Structure Determination of Haemophilus influenzae Tellurite-Resistance Protein A via 200 kV Transmission Electron Microscopy.
Int J Mol Sci, 25, 2024
8VI2
DownloadVisualize
BU of 8vi2 by Molmil
TehA from Haemophilus influenzae purified in DDM
Descriptor: Tellurite resistance protein TehA homolog
Authors:Catalano, C, Senko, S, Tran, N.L, Lucier, K.W, Farwell, A.C, Silva, M.S, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2024-01-03
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:High-Resolution Cryo-Electron Microscopy Structure Determination of Haemophilus influenzae Tellurite-Resistance Protein A via 200 kV Transmission Electron Microscopy.
Int J Mol Sci, 25, 2024
6SH8
DownloadVisualize
BU of 6sh8 by Molmil
Cryo-EM structure of the Type III-B Cmr-beta bound to cognate target RNA and AMPPnP, state 2, in the presence of ssDNA
Descriptor: CRISPR-associated RAMP protein, Cmr4 family, Cmr6 family, ...
Authors:Sofos, N, Montoya, G, Stella, S.
Deposit date:2019-08-06
Release date:2020-07-08
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Structures of the Cmr-beta Complex Reveal the Regulation of the Immunity Mechanism of Type III-B CRISPR-Cas.
Mol.Cell, 79, 2020
8VRW
DownloadVisualize
BU of 8vrw by Molmil
Cryo-EM structure of human invariant chain in complex with HLA-DR15
Descriptor: HLA class II histocompatibility antigen gamma chain, HLA class II histocompatibility antigen, DR alpha chain, ...
Authors:Wang, N, Caveney, N.A, Jude, K.M, Garcia, K.C.
Deposit date:2024-01-22
Release date:2024-05-08
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Structural insights into human MHC-II association with invariant chain.
Proc.Natl.Acad.Sci.USA, 121, 2024
8W01
DownloadVisualize
BU of 8w01 by Molmil
Crystal structure of DUF1735 domain-containing protein (GH18-like) from Bacteroides faecium at 2.7 A resolution (Space group C2)
Descriptor: DUF1735 domain-containing protein
Authors:Sastre, D.E, Navarro, M.V.A.S, Sultana, N, Sundberg, E.J.
Deposit date:2024-02-13
Release date:2024-05-29
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate.
Nat Commun, 15, 2024
6SMT
DownloadVisualize
BU of 6smt by Molmil
S-enantioselective imine reductase from Mycobacterium smegmatis
Descriptor: (2S)-2-ethylhexan-1-ol, 1,2-ETHANEDIOL, 6-phosphogluconate dehydrogenase, ...
Authors:Meyer, T, Zumbraegel, N, Geerds, C, Groeger, H, Niemann, H.H.
Deposit date:2019-08-22
Release date:2020-08-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural Characterization of an S -enantioselective Imine Reductase from Mycobacterium Smegmatis .
Biomolecules, 10, 2020
7JPE
DownloadVisualize
BU of 7jpe by Molmil
Room Temperature Structure of SARS-CoV-2 Nsp10/Nsp16 Methyltransferase in a Complex with m7GpppA Cap-0 and SAM Determined by Fixed-Target Serial Crystallography
Descriptor: 2'-O-methyltransferase, 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, Non-structural protein 10, ...
Authors:Wilamowski, M, Sherrell, D.A, Minasov, G, Kim, Y, Shuvalova, L, Lavens, A, Chard, R, Rosas-Lemus, M, Maltseva, N, Jedrzejczak, R, Michalska, K, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-08-07
Release date:2020-08-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:2'-O methylation of RNA cap in SARS-CoV-2 captured by serial crystallography.
Proc.Natl.Acad.Sci.USA, 118, 2021
7JXE
DownloadVisualize
BU of 7jxe by Molmil
Mapping neutralizing and immunodominant sites on the SARS-CoV-2 spike receptor-binding domain by structure-guided high-resolution serology
Descriptor: S2X35 antigen-binding (Fab) fragment
Authors:Tortorici, M.A, Park, Y.J, Walls, A.C, Czudnochowski, N, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G, Veesler, D.
Deposit date:2020-08-27
Release date:2020-10-14
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.043 Å)
Cite:Mapping Neutralizing and Immunodominant Sites on the SARS-CoV-2 Spike Receptor-Binding Domain by Structure-Guided High-Resolution Serology.
Cell, 183, 2020

226707

数据于2024-10-30公开中

PDB statisticsPDBj update infoContact PDBjnumon