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PDB: 17204 results

6D4M
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BU of 6d4m by Molmil
Crystal Structure of a Fc Fragment of Rhesus macaque (Macaca mulatta) IgG3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Fc fragment of IgG3
Authors:Gohain, N, Tolbert, W.D, Pazgier, M.
Deposit date:2018-04-18
Release date:2019-05-01
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.47 Å)
Cite:From Rhesus macaque to human: structural evolutionary pathways for immunoglobulin G subclasses.
Mabs, 11, 2019
6GBU
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BU of 6gbu by Molmil
Crystal structure of the second SH3 domain of FCHSD2 (SH3-2) in complex with the fourth SH3 domain of ITSN1 (SH3d)
Descriptor: F-BAR and double SH3 domains protein 2, Intersectin-1
Authors:Almeida-Souza, L, Frank, R, Garcia-Nafria, J, Colussi, A, Gunawardana, N, Johnson, C.M, Yu, M, Howard, G, Andrews, B, Vallis, Y, McMahon, H.T.
Deposit date:2018-04-16
Release date:2018-06-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.44 Å)
Cite:A Flat BAR Protein Promotes Actin Polymerization at the Base of Clathrin-Coated Pits.
Cell, 174, 2018
1PE7
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BU of 1pe7 by Molmil
Thermolysin with bicyclic inhibitor
Descriptor: 2-(4-METHYLPHENOXY)ETHYLPHOSPHINATE, 3-METHYLBUTAN-1-AMINE, CALCIUM ION, ...
Authors:Juers, D, Yusuff, N, Bartlett, P.A, Matthews, B.W.
Deposit date:2003-05-21
Release date:2004-06-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Conformational Constraint and Structural Complementarity in Thermolysin Inhibitors: Structures of Enzyme Complexes and Conclusions
To be Published
1PHQ
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BU of 1phq by Molmil
Crystal structure of KDO8P synthase in its binary complex with substrate analog E-FPEP
Descriptor: 2-dehydro-3-deoxyphosphooctonate aldolase, 3-FLUORO-2-(PHOSPHONOOXY)PROPANOIC ACID
Authors:Vainer, R, Adir, N, Baasov, T, Belakhov, V, Rabkin, E.
Deposit date:2003-05-29
Release date:2004-07-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystallographic Analysis of the Phosphoenol Pyruvate Binding Site in E. Coli KDO8P Synthase
To be Published
6FMR
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BU of 6fmr by Molmil
IMISX-EP of Se-PepTSt
Descriptor: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, Di-or tripeptide:H+ symporter, PHOSPHATE ION
Authors:Huang, C.-Y, Olieric, V, Howe, N, Warshamanage, R, Weinert, T, Panepucci, E, Vogeley, L, Basu, S, Diederichs, K, Caffrey, M, Wang, M.
Deposit date:2018-02-02
Release date:2018-08-29
Last modified:2018-10-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:In situ serial crystallography for rapid de novo membrane protein structure determination.
Commun Biol, 1, 2018
5DQ5
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BU of 5dq5 by Molmil
Endothiapepsin in complex with fragment 209
Descriptor: 3-[2-(4-methyl-1,2-oxazol-3-yl)ethyl]pyridine, ACETATE ION, Endothiapepsin, ...
Authors:Radeva, N, Heine, A, Klebe, G.
Deposit date:2015-09-14
Release date:2016-09-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Crystallographic Fragment Screening of an Entire Library
to be published
1R7G
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BU of 1r7g by Molmil
NMR structure of the membrane anchor domain (1-31) of the nonstructural protein 5A (NS5A) of hepatitis C virus (Minimized average structure, Sample in 100mM DPC)
Descriptor: Genome polyprotein
Authors:Penin, F, Brass, V, Appel, N, Ramboarina, S, Montserret, R, Ficheux, D, Blum, H.E, Bartenschlager, R, Moradpour, D.
Deposit date:2003-10-21
Release date:2004-08-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure and function of the membrane anchor domain of hepatitis C virus nonstructural protein 5A.
J.Biol.Chem., 279, 2004
6FMW
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BU of 6fmw by Molmil
IMISX-EP of Hg-BacA cocrystallization
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MERCURY (II) ION, ...
Authors:Huang, C.-Y, Olieric, V, Howe, N, Warshamanage, R, Weinert, T, Panepucci, E, Vogeley, L, Basu, S, Diederichs, K, Caffrey, M, Wang, M.
Deposit date:2018-02-02
Release date:2018-09-05
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:In situ serial crystallography for rapid de novo membrane protein structure determination.
Commun Biol, 1, 2018
6V0G
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BU of 6v0g by Molmil
Lipophilic Envelope-spanning Tunnel B (LetB), Model 5
Descriptor: Intermembrane transport protein YebT
Authors:Isom, G.L, Coudray, N, MacRae, M.R, McManus, C.T, Ekiert, D.C, Bhabha, G.
Deposit date:2019-11-18
Release date:2020-05-06
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:LetB Structure Reveals a Tunnel for Lipid Transport across the Bacterial Envelope.
Cell, 181, 2020
6V9Q
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Cryo-EM structure of Cascade-TniQ binary complex
Descriptor: Cas8, RNA (61-MER), TniQ family protein, ...
Authors:Jia, N, Patel, D.J.
Deposit date:2019-12-15
Release date:2020-01-29
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure-function insights into the initial step of DNA integration by a CRISPR-Cas-Transposon complex.
Cell Res., 30, 2020
6VA8
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BU of 6va8 by Molmil
Crystal structure of glucose-6-phosphate dehydrogenase F381L mutant in complex with catalytic NADP+
Descriptor: Glucose-6-phosphate 1-dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Horikoshi, N, Mochly-Rosen, D, Wakatsuki, S.
Deposit date:2019-12-17
Release date:2021-01-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.95 Å)
Cite:Long-range structural defects by pathogenic mutations in most severe glucose-6-phosphate dehydrogenase deficiency.
Proc.Natl.Acad.Sci.USA, 118, 2021
6DEI
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BU of 6dei by Molmil
Structure of Dse3-Csm1 complex
Descriptor: ACETATE ION, Monopolin complex subunit CSM1, Protein DSE3, ...
Authors:Singh, N, Corbett, K.D.
Deposit date:2018-05-12
Release date:2018-10-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.699 Å)
Cite:The budding-yeast RWD protein Csm1 scaffolds diverse protein complexes through a conserved structural mechanism.
Protein Sci., 27, 2018
6VDI
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BU of 6vdi by Molmil
Crystal structure of ancestral apicomplexan lactate dehydrogenase with sulfate.
Descriptor: SULFATE ION, lactate dehydrogenase
Authors:Theobald, D.L, Wirth, J.D, Classen, S, Perlmutter, N.
Deposit date:2019-12-27
Release date:2020-01-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mechanism of Bifunctionality in an Ancestral Apicomplexan Malate/Lactate Dehydrogenase
To Be Published
6FUI
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BU of 6fui by Molmil
Complement factor D in complex with the inhibitor 3-((3-((3-(aminomethyl)phenyl)amino)-1H-pyrazolo[3,4-d]pyrimidin-4-yl)amino)phenol
Descriptor: (1~{R},2~{S})-2-[[4-[[3-(aminomethyl)phenyl]amino]quinazolin-2-yl]amino]cyclohexane-1-carboxylic acid, Complement factor D
Authors:Mac Sweeney, A, Ostermann, N, Vulpetti, A, Maibaum, J, Erbel, P, Lorthiois, E, Yoon, T, Randl, S, Ruedisser, S.
Deposit date:2018-02-27
Release date:2018-06-06
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Discovery and Design of First Benzylamine-Based Ligands Binding to an Unlocked Conformation of the Complement Factor D.
ACS Med Chem Lett, 9, 2018
6PNT
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BU of 6pnt by Molmil
Structural Characterization of UDP-glycosyltransferase from Tetranychus Urticae
Descriptor: UDP-glycosyltransferase 202A2
Authors:Daneshian, L, Dermauw, W, Wybouw, N, Van Leeuwen, T, Chruszcz, M.
Deposit date:2019-07-03
Release date:2020-07-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Characterization of UDP-glycosyltransferase from Tetranychus Urticae
To Be Published
6FXU
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BU of 6fxu by Molmil
Crystal structure of human transthyretin mutant T119M at pH 5.5
Descriptor: Transthyretin
Authors:Varejao, N, Esperante, S, Ventura, S, Reverter, D.
Deposit date:2018-03-09
Release date:2019-03-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.359 Å)
Cite:Disease-associated mutations impacting BC-loop flexibility trigger long-range transthyretin tetramer destabilization and aggregation.
J.Biol.Chem., 297, 2021
1RP8
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BU of 1rp8 by Molmil
Crystal structure of barley alpha-amylase isozyme 1 (amy1) inactive mutant d180a in complex with maltoheptaose
Descriptor: Alpha-amylase type 1 isozyme, CALCIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Robert, X, Haser, R, Aghajari, N.
Deposit date:2003-12-03
Release date:2005-06-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Oligosaccharide Binding to Barley {alpha}-Amylase 1
J.Biol.Chem., 280, 2005
8WZ4
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BU of 8wz4 by Molmil
Cryo-EM structure of prefusion-stabilized RSV F (DS-Cav1 strain: A2) in complex with nAb 5B11 (localized refinement)
Descriptor: 5B11 Fab Heavy Chain, 5B11 Fab Light Chain, RSV Fusion glycoprotein
Authors:Liu, L, Sun, H, Sun, Y, Zheng, Q, Li, S, Zheng, Z, Xia, N.
Deposit date:2023-11-01
Release date:2024-11-06
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Cryo-EM structure of prefusion-stabilized RSV F (DS-Cav1 strain: A2) in complex with nAb 5B11 (localized refinement)
To Be Published
5DPJ
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BU of 5dpj by Molmil
sfGFP double mutant - 133/149 p-ethynyl-L-phenylalanine
Descriptor: Green fluorescent protein
Authors:Dippel, A.B, Olenginski, G.M, Maurici, N, Liskov, M.T, Brewer, S.H, Phillips-Piro, C.M.
Deposit date:2015-09-12
Release date:2016-02-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Probing the effectiveness of spectroscopic reporter unnatural amino acids: a structural study.
Acta Crystallogr D Struct Biol, 72, 2016
5DPZ
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BU of 5dpz by Molmil
Endothiapepsin in complex with fragment 31
Descriptor: 2-methylaniline, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Radeva, N, Uehlein, M, Weiss, M, Heine, A, Klebe, G.
Deposit date:2015-09-14
Release date:2016-09-28
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.328 Å)
Cite:Crystallographic Fragment Screening of an Entire Library
To Be Published
5DQB
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BU of 5dqb by Molmil
Green/cyan WasCFP at pH 8.0
Descriptor: GLYCEROL, SODIUM ION, WasCFP_pH2
Authors:Pletnev, V, Pletneva, N, Pletnev, S.
Deposit date:2015-09-14
Release date:2016-07-27
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structure of pH and T dependent green fluorescent protein WasCFP with Trp based chromophore
Russ.J.Bioorganic Chem., 42 (6), 2016
6UYF
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BU of 6uyf by Molmil
Structure of Hepatitis C Virus Envelope Glycoprotein E2mc3-v1 redesigned core from genotype 6a bound to broadly neutralizing antibody AR3B
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein E2, ...
Authors:Tzarum, N, Wilson, I.A, Zhu, J.
Deposit date:2019-11-13
Release date:2020-04-22
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Proof of concept for rational design of hepatitis C virus E2 core nanoparticle vaccines.
Sci Adv, 6, 2020
6FZL
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BU of 6fzl by Molmil
Crystal structure of human transthyretin double mutant K35T/T119M
Descriptor: Transthyretin
Authors:Esperante, S, Ventura, S, Reverter, D, Varejao, N.
Deposit date:2018-03-15
Release date:2019-03-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.446 Å)
Cite:Disease-associated mutations impacting BC-loop flexibility trigger long-range transthyretin tetramer destabilization and aggregation.
J.Biol.Chem., 297, 2021
8RZF
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BU of 8rzf by Molmil
RNase W from Sulfolobus acidocaldarius
Descriptor: MAGNESIUM ION, Probable ribonuclease FAU-1
Authors:Vayssieres, M, Blaud, M, Leulliot, N.
Deposit date:2024-02-12
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:RNase W, a conserved ribonuclease family with a novel active site.
Nucleic Acids Res., 2024
6DFP
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BU of 6dfp by Molmil
Crystal Structure of a Tripartite Toxin Component VCA0883 from Vibrio cholerae
Descriptor: VCA0883
Authors:Kim, Y, Maltseva, N, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-05-15
Release date:2018-05-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A Genomic Island of Vibrio cholerae Encodes a Three-Component Cytotoxin with Monomer and Protomer Forms Structurally Similar to Alpha-Pore-Forming Toxins.
J.Bacteriol., 204, 2022

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