Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17068 件

1T1Y
DownloadVisualize
BU of 1t1y by Molmil
Structural basis for degenerate recognition of HIV peptide variants by cytotoxic lymphocyte, variant SL9-5V
分子名称: Beta-2-microglobulin, GAG PEPTIDE, HLA class I histocompatibility antigen, ...
著者Martinez-Hackert, E, Anikeeva, N, Kalams, S.A, Walker, B.D, Hendrickson, W.A, Sykulev, Y.
登録日2004-04-19
公開日2005-09-06
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis for Degenerate Recognition of Natural HIV Peptide Variants by Cytotoxic Lymphocytes.
J.Biol.Chem., 281, 2006
1OXX
DownloadVisualize
BU of 1oxx by Molmil
Crystal structure of GlcV, the ABC-ATPase of the glucose ABC transporter from Sulfolobus solfataricus
分子名称: ABC transporter, ATP binding protein, IODIDE ION
著者Verdon, G, Albers, S.-V, van Oosterwijk, N, Dijkstra, B.W, Driessen, A.J.M, Thunnissen, A.M.W.H.
登録日2003-04-03
公開日2003-09-30
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Formation of the productive ATP-Mg2+-bound dimer of GlcV, an ABC-ATPase from Sulfolobus solfataricus
J.Mol.Biol., 334, 2003
1P7N
DownloadVisualize
BU of 1p7n by Molmil
Dimeric Rous Sarcoma virus Capsid protein structure with an upstream 25-amino acid residue extension of C-terminal of Gag p10 protein
分子名称: GAG POLYPROTEIN CAPSID PROTEIN P27
著者Nandhagopal, N, Simpson, A.A, Johnson, M.C, Francisco, A.B, Schatz, G.W, Rossmann, M.G, Vogt, V.M.
登録日2003-05-02
公開日2003-12-23
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Dimeric rous sarcoma virus capsid protein structure relevant to immature gag assembly
J.Mol.Biol., 335, 2004
1ONL
DownloadVisualize
BU of 1onl by Molmil
Crystal structure of Thermus thermophilus HB8 H-protein of the glycine cleavage system
分子名称: glycine cleavage system H protein
著者Nakai, T, Ishijima, J, Masui, R, Kuramitsu, S, Kamiya, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-02-28
公開日2003-08-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of Thermus thermophilus HB8 H-protein of the glycine-cleavage system, resolved by a six-dimensional molecular-replacement method.
Acta Crystallogr.,Sect.D, 59, 2003
1P1N
DownloadVisualize
BU of 1p1n by Molmil
GluR2 Ligand Binding Core (S1S2J) Mutant L650T in Complex with Kainate
分子名称: 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE, Glutamate receptor 2
著者Armstrong, N, Mayer, M.L, Gouaux, E.
登録日2003-04-13
公開日2003-06-10
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Tuning activation of the AMPA-sensitive GluR2 ion channel by genetic adjustment of agonist-induced conformational changes.
Proc.Natl.Acad.Sci.USA, 100, 2003
1P2G
DownloadVisualize
BU of 1p2g by Molmil
Crystal Structure of Glycogen Phosphorylase B in complex with Gamma Cyclodextrin
分子名称: Cyclooctakis-(1-4)-(alpha-D-glucopyranose), Glycogen phosphorylase, muscle form, ...
著者Pinotsis, N, Leonidas, D.D, Chrysina, E.D, Oikonomakos, N.G, Mavridis, I.M.
登録日2003-04-15
公開日2003-09-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The binding of beta- and gamma-cyclodextrins to glycogen phosphorylase b: Kinetic and crystallographic studies.
Protein Sci., 12, 2003
1P6V
DownloadVisualize
BU of 1p6v by Molmil
Crystal structure of the tRNA domain of transfer-messenger RNA in complex with SmpB
分子名称: 45-MER, SsrA-binding protein
著者Gutmann, S, Haebel, P.W, Metzinger, L, Sutter, M, Felden, B, Ban, N.
登録日2003-04-30
公開日2003-08-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of the transfer-RNA domain of transfer-messenger RNA in complex with SmpB
Nature, 424, 2003
3BRE
DownloadVisualize
BU of 3bre by Molmil
Crystal Structure of P.aeruginosa PA3702
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), MAGNESIUM ION, Probable two-component response regulator
著者De, N, Pirruccello, M, Krasteva, P.V, Bae, N, Raghavan, R.V, Sondermann, H.
登録日2007-12-21
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Phosphorylation-independent regulation of the diguanylate cyclase WspR.
Plos Biol., 6, 2008
1P9O
DownloadVisualize
BU of 1p9o by Molmil
Crystal Structure of Phosphopantothenoylcysteine Synthetase
分子名称: Phosphopantothenoylcysteine synthetase, SULFATE ION
著者Manoj, N, Strauss, E, Begley, T.P, Ealick, S.E.
登録日2003-05-12
公開日2003-09-02
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of human phosphopantothenoylcysteine synthetase at 2.3 A resolution.
Structure, 11, 2003
1OQ0
DownloadVisualize
BU of 1oq0 by Molmil
P6.1 stem loop from the activation domain of hTR
分子名称: P6.1 RNA hairpin from hTR
著者Leeper, T, Leulliot, N, Varani, G.
登録日2003-03-06
公開日2003-05-13
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The solution structure of an essential stem-loop of human telomerase RNA
NUCLEIC ACIDS RES., 31, 2003
2M0G
DownloadVisualize
BU of 2m0g by Molmil
Structure, phosphorylation and U2AF65 binding of the Nterminal Domain of splicing factor 1 during 3 splice site Recognition
分子名称: Splicing factor 1, Splicing factor U2AF 65 kDa subunit
著者Madl, T, Sattler, M, Zhang, Y, Bagdiul, I, Kern, T, Kang, H, Zou, P, Maeusbacher, N, Sieber, S.A, Kraemer, A.
登録日2012-10-25
公開日2013-01-30
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure, phosphorylation and U2AF65 binding of the N-terminal domain of splicing factor 1 during 3'-splice site recognition.
Nucleic Acids Res., 41, 2013
2MHZ
DownloadVisualize
BU of 2mhz by Molmil
Structure of Exocyclic S,S N6,N6-(2,3-Dihydroxy-1,4-butadiyl)-2'-Deoxyadenosine Adduct Induced by 1,2,3,4-Diepoxybutane in DNA
分子名称: 5'-D(*CP*GP*GP*AP*CP*(SDE)P*AP*GP*AP*AP*G)-3', 5'-D(*CP*TP*TP*CP*TP*TP*GP*TP*CP*CP*G)-3'
著者Kowal, E.A, Seneviratne, U, Wickramaratne, S, Doherty, K.E, Cao, X, Tretyakova, N, Stone, M.P.
登録日2013-12-05
公開日2014-05-28
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structures of Exocyclic R,R- and S,S-N(6),N(6)-(2,3-Dihydroxybutan-1,4-diyl)-2'-Deoxyadenosine Adducts Induced by 1,2,3,4-Diepoxybutane.
Chem.Res.Toxicol., 27, 2014
1OIB
DownloadVisualize
BU of 1oib by Molmil
PHOSPHATE-BINDING PROTEIN MUTANT T141D
分子名称: PHOSPHATE-BINDING PROTEIN
著者Yao, N, Choudhary, A, Ledvina, P.S, Quiocho, F.A.
登録日1995-11-25
公開日1997-04-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Modulation of a salt link does not affect binding of phosphate to its specific active transport receptor.
Biochemistry, 35, 1996
1RIS
DownloadVisualize
BU of 1ris by Molmil
CRYSTAL STRUCTURE OF THE RIBOSOMAL PROTEIN S6 FROM THERMUS THERMOPHILUS
分子名称: RIBOSOMAL PROTEIN S6
著者Lindahl, M, Svensson, L.A, Liljas, A, Sedelnikova, S.E, Eliseikina, I.A, Fomenkova, N.P, Nevskaya, N, Nikonov, S.V, Garber, M.B, Muranova, T.A, Rykonova, A.I, Amons, R.
登録日1994-05-31
公開日1994-09-30
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the ribosomal protein S6 from Thermus thermophilus.
EMBO J., 13, 1994
2LZ6
DownloadVisualize
BU of 2lz6 by Molmil
Distinct ubiquitin binding modes exhibited by sh3 domains: molecular determinants and functional implications
分子名称: CD2-associated protein, Ubiquitin
著者Ortega-Roldan, J, Azuaga, A, Blackledge, M, Van Nuland, N.
登録日2012-09-24
公開日2013-10-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Distinct Ubiquitin Binding Modes Exhibited by SH3 Domains: Molecular Determinants and Functional Implications.
Plos One, 8, 2013
2MHX
DownloadVisualize
BU of 2mhx by Molmil
Structure of Exocyclic R,R N6,N6-(2,3-Dihydroxy-1,4-butadiyl)-2'-Deoxyadenosine Adduct Induced by 1,2,3,4-Diepoxybutane in DNA
分子名称: 5'-D(*CP*GP*GP*AP*CP*(RBD)P*AP*GP*AP*AP*G)-3'), 5'-D(*CP*TP*TP*CP*TP*TP*GP*TP*CP*CP*G)-3')
著者Kowal, E.A, Seneviratne, U, Wickramaratne, S, Doherty, K.E, Cao, X, Tretyakova, N, Stone, M.P.
登録日2013-12-05
公開日2014-05-28
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structures of Exocyclic R,R- and S,S-N(6),N(6)-(2,3-Dihydroxybutan-1,4-diyl)-2'-Deoxyadenosine Adducts Induced by 1,2,3,4-Diepoxybutane.
Chem.Res.Toxicol., 27, 2014
2MNX
DownloadVisualize
BU of 2mnx by Molmil
Major groove orientation of the (2S)-N6-(2-hydroxy-3-buten-1-yl)-2'-deoxyadenosine DNA adduct induced by 1,2-epoxy-3-butene
分子名称: 5'-D(*CP*GP*GP*AP*CP*(6HB)P*AP*GP*AP*AP*G)-3', 5'-D(*CP*TP*TP*CP*TP*TP*GP*TP*CP*CP*G)-3'
著者Kowal, E.A, Kotapati, S, Turo, M, Tretyakova, N, Stone, M.P.
登録日2014-04-16
公開日2014-10-08
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Major Groove Orientation of the (2S)-N(6)-(2-Hydroxy-3-buten-1-yl)-2'-deoxyadenosine DNA Adduct Induced by 1,2-Epoxy-3-butene.
Chem.Res.Toxicol., 27, 2014
1RPK
DownloadVisualize
BU of 1rpk by Molmil
Crystal structure of barley alpha-amylase isozyme 1 (amy1) in complex with acarbose
分子名称: 4,6-dideoxy-4-{[(1S,5R,6S)-3-formyl-5,6-dihydroxy-4-oxocyclohex-2-en-1-yl]amino}-alpha-D-xylo-hex-5-enopyranose-(1-4)-alpha-D-glucopyranose, 4,6-dideoxy-4-{[(1S,5R,6S)-3-formyl-5,6-dihydroxy-4-oxocyclohex-2-en-1-yl]amino}-alpha-D-xylo-hex-5-enopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Alpha-amylase type 1 isozyme, ...
著者Robert, X, Haser, R, Aghajari, N.
登録日2003-12-03
公開日2005-06-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Oligosaccharide Binding to Barley {alpha}-Amylase 1
J.Biol.Chem., 280, 2005
1RDV
DownloadVisualize
BU of 1rdv by Molmil
RUBREDOXIN FROM DESULFOVIBRIO VULGARIS MIYAZAKI F, TRIGONAL CRYSTAL FORM
分子名称: FE (III) ION, RUBREDOXIN
著者Higuchi, Y, Yasuoka, N.
登録日1998-09-30
公開日1999-05-18
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure determination of rubredoxin from Desulfovibrio vulgaris Miyazaki F in two crystal forms.
Acta Crystallogr.,Sect.D, 55, 1999
1RCP
DownloadVisualize
BU of 1rcp by Molmil
CYTOCHROME C'
分子名称: CYTOCHROME C', PROTOPORPHYRIN IX CONTAINING FE
著者Tahirov, T.H, Misaki, S, Meyer, T.E, Cusanovich, M.A, Higuchi, Y, Yasuoka, N.
登録日1995-08-23
公開日1996-06-10
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献High-resolution crystal structures of two polymorphs of cytochrome c' from the purple phototrophic bacterium rhodobacter capsulatus.
J.Mol.Biol., 259, 1996
1TG4
DownloadVisualize
BU of 1tg4 by Molmil
Design of specific inhibitors of groupII phospholipase A2(PLA2): Crystal structure of the complex formed between russells viper PLA2 and designed peptide Phe-Leu-Ala-Tyr-Lys at 1.7A resolution
分子名称: FLAYK peptide, Phospholipase A2, SULFATE ION
著者Singh, N, Somvanshi, R.K, Sharma, S, Dey, S, Perbandt, M, Betzel, C, Ethayathulla, A.S, Singh, T.P.
登録日2004-05-28
公開日2004-06-08
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Design of specific inhibitors of groupII phospholipase A2(PLA2): Crystal structure of the complex formed between russells viper PLA2 and designed peptide Phe-Leu-Ala-Tyr-Lys at 1.7A resolution
TO BE PUBLISHED
1TJ9
DownloadVisualize
BU of 1tj9 by Molmil
Structure of the complexed formed between group II phospholipase A2 and a rationally designed tetra peptide,Val-Ala-Arg-Ser at 1.1A resolution
分子名称: ACETIC ACID, Phospholipase A2, SULFATE ION, ...
著者Singh, N, Ethayathulla, A.S, K Somvanshi, R, Sharma, S, Dey, S, Perbandt, M, Betzel, C, Kaur, P, Singh, T.P.
登録日2004-06-03
公開日2004-06-08
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structure of the complex formed between group II phospholipase A2 and a rationally designed tetra peptide,Val-Ala-Arg-Ser at 1.1A resolution
TO BE PUBLISHED
1T0I
DownloadVisualize
BU of 1t0i by Molmil
YLR011wp, a Saccharomyces cerevisiae NA(D)PH-dependent FMN reductase
分子名称: CALCIUM ION, FLAVIN MONONUCLEOTIDE, YLR011wp
著者Liger, D, Graille, M, Zhou, C.-Z, Leulliot, N, Quevillon-Cheruel, S, Blondeau, K, Janin, J, van Tilbeurgh, H.
登録日2004-04-09
公開日2004-06-22
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure and Functional Characterization of Yeast YLR011wp, an Enzyme with NAD(P)H-FMN and Ferric Iron Reductase Activities
J.Biol.Chem., 279, 2004
1T22
DownloadVisualize
BU of 1t22 by Molmil
Structural basis for degenerate recognition of HIV peptide variants by cytotoxic lymphocyte, variant SL9, orthorhombic crystal
分子名称: Beta-2-microglobulin, GAG PEPTIDE, HLA class I histocompatibility antigen, ...
著者Martinez-Hackert, E, Anikeeva, N, Kalams, S.A, Walker, B.D, Hendrickson, W.A, Sykulev, Y.
登録日2004-04-19
公開日2005-09-06
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Basis for Degenerate Recognition of Natural HIV Peptide Variants by Cytotoxic Lymphocytes.
J.Biol.Chem., 281, 2006
1T37
DownloadVisualize
BU of 1t37 by Molmil
Design of specific inhibitors of phospholipase A2: Crystal structure of the complex formed between group I phospholipase A2 and a designed pentapeptide Leu-Ala-Ile-Tyr-Ser at 2.6A resolution
分子名称: ACETATE ION, Phospholipase A2 isoform 3, Synthetic peptide
著者Singh, R.K, Singh, N, Jabeen, T, Makker, J, Sharma, S, Dey, S, Singh, T.P.
登録日2004-04-25
公開日2004-05-04
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the complex of group I PLA2 with a group II-specific peptide Leu-Ala-Ile-Tyr-Ser (LAIYS) at 2.6 A resolution.
J.Drug Target., 13, 2005

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon