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PDB: 17170 件

8VCZ
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Crystal Structure of KAI2 from Oryza sativa
分子名称: Probable esterase D14L
著者Gilio, A.K, Shabek, N, Guercio, A.M, Pawlak, J.
登録日2023-12-14
公開日2024-07-31
最終更新日2024-08-21
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Structural insights into rice KAI2 receptor provide functional implications for perception and signal transduction.
J.Biol.Chem., 300, 2024
4PIS
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BU of 4pis by Molmil
Crystal structure of human adenovirus 8 protease in complex with a nitrile inhibitor
分子名称: N~2~-[(2R)-2-(3,5-dichlorophenyl)-2-(dimethylamino)acetyl]-N-({2-[(Z)-iminomethyl]pyrimidin-4-yl}methyl)-L-isoleucinamide, PVI, Protease
著者Mac Sweeney, A, Grosche, P, Ellis, D, Combrink, K, Erbel, P, Hughes, N, Sirockin, F, Melkko, S, Bernardi, A, Ramage, P, Jarousse, N, Altmann, E.
登録日2014-05-09
公開日2014-09-10
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Discovery and structure-based optimization of adenain inhibitors.
Acs Med.Chem.Lett., 5, 2014
8VD3
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Crystal Structure of D14 from Arabidopsis thaliana
分子名称: Strigolactone esterase D14
著者Gilio, A.K, Shabek, N, Guercio, A.M, Pawlak, J.
登録日2023-12-14
公開日2024-07-31
最終更新日2024-08-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insights into rice KAI2 receptor provide functional implications for perception and signal transduction.
J.Biol.Chem., 300, 2024
8VMG
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Crystal structure of GSK-3 26-383 bound to Axin 383-435
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, ...
著者Enos, M.D, Gavagan, M, Jameson, N, Zalatan, J.G, Weis, W.I.
登録日2024-01-13
公開日2024-08-28
最終更新日2024-09-25
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural and functional effects of phosphopriming and scaffolding in the kinase GSK-3 beta.
Sci.Signal., 17, 2024
8VCD
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Crystal Structure of plant Carboxylesterase 15 bound to SL intermediate
分子名称: (5S)-5-hydroxy-3-methylfuran-2(5H)-one, Carboxylesterase 15, GLYCEROL
著者Palayam, M, Shabek, N.
登録日2023-12-14
公開日2024-08-07
最終更新日2024-08-14
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Structural insights into strigolactone catabolism by carboxylesterases reveal a conserved conformational regulation.
Nat Commun, 15, 2024
6BKD
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BU of 6bkd by Molmil
Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody AR3D
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab AR3D heavy chain, Fab AR3D light chain, ...
著者Tzarum, N, Wilson, I.A, Law, M.
登録日2017-11-08
公開日2018-12-26
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Genetic and structural insights into broad neutralization of hepatitis C virus by human VH1-69 antibodies.
Sci Adv, 5, 2019
8VME
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Crystal structure of the GSK-3/Axin complex bound to a phosphorylated beta-catenin T41A peptide
分子名称: ADENOSINE-5'-DIPHOSPHATE, Axin-1, Catenin beta-1, ...
著者Enos, M.D, Gavagan, M, Jameson, N, Zalatan, J.G, Weis, W.I.
登録日2024-01-13
公開日2024-08-28
最終更新日2024-09-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and functional effects of phosphopriming and scaffolding in the kinase GSK-3 beta.
Sci.Signal., 17, 2024
8VMF
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Crystal structure of a transition-state mimic of the GSK-3/Axin complex bound to a beta-catenin S45D peptide
分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Axin-1, ...
著者Enos, M.D, Gavagan, M, Jameson, N, Zalatan, J.G, Weis, W.I.
登録日2024-01-13
公開日2024-08-28
最終更新日2024-09-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and functional effects of phosphopriming and scaffolding in the kinase GSK-3 beta.
Sci.Signal., 17, 2024
6CHR
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Crystal structure of a group II intron lariat with an intact 3' splice site (pre-2s state)
分子名称: MAGNESIUM ION, RNA (5'-R(P*UP*GP*UP*UP*UP*AP*UP*UP*AP*AP*AP*AP*A)-3'), RNA (621-MER), ...
著者Chan, R.T, Peters, J.K, Robart, A.R, Wiryaman, T, Rajashankar, K.R, Toor, N.
登録日2018-02-22
公開日2018-11-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Structural basis for the second step of group II intron splicing.
Nat Commun, 9, 2018
8VTU
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Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution
分子名称: 1-cyclopropyl-7-[(4-{[3-({(3aR,4R,7R,8S,9S,10R,11R,13R,14E,15S,15aR)-10-{[(2S,3R,4S,6R)-4-(dimethylamino)-3-hydroxy-6-methyloxan-2-yl]oxy}-4-ethyl-11-methoxy-3a,7,9,11,13,15-hexamethyl-14-[({3-[5-(methylcarbamoyl)pyridin-3-yl]prop-2-yn-1-yl}oxy)imino]-2,6-dioxododecahydro-2H,4H-[1,3]dioxolo[4,5-c]oxacyclotetradecin-8-yl}oxy)-3-oxopropyl]amino}butyl)amino]-6-fluoro-4-oxo-1,4-dihydroquinoline-3-carboxylic acid (non-preferred name), 16S Ribosomal RNA, 23S Ribosomal RNA, ...
著者Aleksandrova, E.V, Ma, C.-X, Klepacki, D, Alizadeh, F, Vazquez-Laslop, N, Liang, J.-H, Polikanov, Y.S, Mankin, A.S.
登録日2024-01-27
公開日2024-08-07
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Macrolones target bacterial ribosomes and DNA gyrase and can evade resistance mechanisms.
Nat.Chem.Biol., 2024
1VIE
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BU of 1vie by Molmil
STRUCTURE OF DIHYDROFOLATE REDUCTASE
分子名称: DIHYDROFOLATE REDUCTASE
著者Narayana, N, Matthews, D.A, Howell, E.E, Xuong, N.-H.
登録日1996-10-03
公開日1997-10-22
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A plasmid-encoded dihydrofolate reductase from trimethoprim-resistant bacteria has a novel D2-symmetric active site.
Nat.Struct.Biol., 2, 1995
4PIE
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BU of 4pie by Molmil
Crystal structure of human adenovirus 2 protease a substrate based nitrile inhibitor
分子名称: ACETATE ION, N-{(2S)-2-(3-chlorophenyl)-2-[(methylsulfonyl)amino]acetyl}-L-phenylalanyl-N-[(2Z)-2-iminoethyl]glycinamide, Pre-protein VI, ...
著者Mac Sweeney, A, Grosche, P, Ellis, D, Combrink, C, Erbel, C, Hughes, N, Sirockin, F, Melkko, S, Bernardi, A, Ramage, P, Jarousse, N, Altmann, E.
登録日2014-05-08
公開日2014-09-10
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Discovery and structure-based optimization of adenain inhibitors.
Acs Med.Chem.Lett., 5, 2014
6DFP
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BU of 6dfp by Molmil
Crystal Structure of a Tripartite Toxin Component VCA0883 from Vibrio cholerae
分子名称: VCA0883
著者Kim, Y, Maltseva, N, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2018-05-15
公開日2018-05-23
最終更新日2022-07-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A Genomic Island of Vibrio cholerae Encodes a Three-Component Cytotoxin with Monomer and Protomer Forms Structurally Similar to Alpha-Pore-Forming Toxins.
J.Bacteriol., 204, 2022
8WFM
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BU of 8wfm by Molmil
Crystal structure of Omicron BA.1 in complex with a neutralizing antibody scFv T11
分子名称: Spike protein S1, T11 scFv
著者Zhang, M, Zhang, N, Gabibov, A, Guo, Y.
登録日2023-09-19
公開日2024-09-25
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Crystal structure of Omicron BA.1 in complex with a neutralizing antibody scFv T11
To Be Published
8WG4
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BU of 8wg4 by Molmil
mouse TMEM63b in DDM-CHS micelle with YN9303-24 Fab
分子名称: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, CHOLESTEROL HEMISUCCINATE, CSC1-like protein 2,Green fluorescent protein
著者Miyata, Y, Takahashi, K, Lee, Y, Sultan, C.S, Kuribayashi, R, Takahashi, M, Hata, K, Bamba, T, Izumi, Y, Liu, K, Uemura, T, Nomura, N, Iwata, S, Nagata, S, Nishizawa, T, Segawa, K.
登録日2023-09-20
公開日2024-09-25
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Mechanosensitive channel TMEM63B functions as a plasma membrane lipid scramblase
To Be Published
6DBY
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BU of 6dby by Molmil
Crystal structure of Nudix 1 from Arabidopsis thaliana
分子名称: MAGNESIUM ION, Nudix hydrolase 1
著者Noel, J.P, Thomas, S.T, Dudareva, N, Henry, L.K.
登録日2018-05-03
公開日2018-09-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Contribution of isopentenyl phosphate to plant terpenoid metabolism.
Nat Plants, 4, 2018
1VIF
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BU of 1vif by Molmil
STRUCTURE OF DIHYDROFOLATE REDUCTASE
分子名称: DIHYDROFOLATE REDUCTASE, FOLIC ACID
著者Narayana, N, Matthews, D.A, Howell, E.E, Xuong, N.-H.
登録日1996-10-03
公開日1997-10-22
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A plasmid-encoded dihydrofolate reductase from trimethoprim-resistant bacteria has a novel D2-symmetric active site.
Nat.Struct.Biol., 2, 1995
6DCS
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BU of 6dcs by Molmil
Stage III sporulation protein AF (SpoIIIAF)
分子名称: SULFATE ION, Stage III sporulation protein AF
著者Strynadka, N.C.J, Zeytuni, N, Camp, A.H, Flanagan, K.A.
登録日2018-05-08
公開日2018-07-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and biochemical characterization of SpoIIIAF, a component of a sporulation-essential channel in Bacillus subtilis.
J. Struct. Biol., 204, 2018
8WFH
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BU of 8wfh by Molmil
Crystal structure of Omicron BA.4/5 in complex with a neutralizing antibody scFv D1
分子名称: D1 scFv, Spike protein S1
著者Zhang, M, Zhang, N, Gabibov, A, Guo, Y.
登録日2023-09-19
公開日2024-09-25
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Crystal structure of Omicron BA.4/5 in complex with a neutralizing antibody scFv D1
To Be Published
6DRA
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BU of 6dra by Molmil
Low IP3 Ca2+ human type 3 1,4,5-inositol trisphosphate receptor
分子名称: CALCIUM ION, Inositol 1,4,5-trisphosphate receptor type 3, ZINC ION
著者Hite, R.K, Paknejad, N.
登録日2018-06-11
公開日2018-08-01
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.96 Å)
主引用文献Structural basis for the regulation of inositol trisphosphate receptors by Ca2+and IP3.
Nat. Struct. Mol. Biol., 25, 2018
8WG3
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mouse TMEM63b in LMNG-CHS micelle
分子名称: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, CHOLESTEROL HEMISUCCINATE, CSC1-like protein 2,Green fluorescent protein
著者Miyata, Y, Takahashi, K, Lee, Y, Sultan, C.S, Kuribayashi, R, Takahashi, M, Hata, K, Bamba, T, Izumi, Y, Liu, K, Uemura, T, Nomura, N, Iwata, S, Nagata, S, Nishizawa, T, Segawa, K.
登録日2023-09-20
公開日2024-09-25
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Mechanosensitive channel TMEM63B functions as a plasma membrane lipid scramblase
To Be Published
6D58
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Crystal structure of a Fc fragment of Human IgG3
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Immunoglobulin heavy constant gamma 3
著者Gohain, N, Tolbert, W.D, Pazgier, M.
登録日2018-04-19
公開日2019-05-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Crystal structure of a Fc fragment of Human IgG3.
To Be Published
6DMQ
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Crystal structure of the T27A mutant of human alpha defensin HNP4.
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Neutrophil defensin 4
著者Gohain, N, Tolbert, W.D, Pazgier, M.
登録日2018-06-05
公開日2019-01-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Systematic mutational analysis of human neutrophil alpha-defensin HNP4.
Biochim Biophys Acta Biomembr, 1861, 2019
6DO4
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KLHDC2 ubiquitin ligase in complex with SelS C-end degron
分子名称: Kelch domain-containing protein 2, SELS C-END DEGRON
著者Rusnac, D.V, Lin, H.C, Yen, H.C.S, Zheng, N.
登録日2018-06-08
公開日2018-12-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Recognition of the Diglycine C-End Degron by CRL2KLHDC2Ubiquitin Ligase.
Mol. Cell, 72, 2018
6BV9
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Structure of proteinaceous RNase P 1 (PRORP1) from A. thaliana after overnight soak with juglone
分子名称: 5-hydroxynaphthalene-1,4-dione, CHLORIDE ION, Proteinaceous RNase P 1, ...
著者Karasik, A, Wu, N, Fierke, C.A, Koutmos, M.
登録日2017-12-12
公開日2019-06-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Inhibition of protein-only RNase P with Gambogic acid and Juglone
To Be Published

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件を2024-10-30に公開中

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