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PDB: 17204 results

5ZCR
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BU of 5zcr by Molmil
DSM5389 glycosyltrehalose synthase
Descriptor: GLYCEROL, MAGNESIUM ION, Maltooligosyl trehalose synthase
Authors:Tamada, T, Okazaki, N.
Deposit date:2018-02-20
Release date:2018-11-21
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of glycosyltrehalose synthase from Sulfolobus shibatae DSM5389
Acta Crystallogr F Struct Biol Commun, 74, 2018
2QHW
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BU of 2qhw by Molmil
Crystal structure of a complex of phospholipase A2 with a gramine derivative at 2.2 resolution
Descriptor: 3-{3-[(DIMETHYLAMINO)METHYL]-1H-INDOL-7-YL}PROPAN-1-OL, Phospholipase A2 VRV-PL-VIIIa
Authors:Kumar, S, Singh, N, Sharma, S, Kaur, P, Singh, T.P.
Deposit date:2007-07-03
Release date:2008-01-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal structure of a complex of phospholipase A2 with a gramine derivative at 2.2 resolution
TO BE PUBLISHED
5H1L
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BU of 5h1l by Molmil
Crystal structure of WD40 repeat domains of Gemin5 in complex with 7-nt U4 snRNA fragment
Descriptor: GLYCEROL, Gem-associated protein 5, U4 snRNA (5'-R(*AP*UP*UP*UP*UP*UP*G)-3')
Authors:Jin, W, Wang, Y, Liu, C.P, Yang, N, Jin, M, Cong, Y, Wang, M, Xu, R.M.
Deposit date:2016-10-10
Release date:2016-11-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for snRNA recognition by the double-WD40 repeat domain of Gemin5
Genes Dev., 30, 2016
2QII
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BU of 2qii by Molmil
Crystal Structure Of tRNA-Guanine Transglycosylase (TGT) From Zymomonas mobilis Complexed With Archaeosine Precursor, Preq0
Descriptor: 2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDINE-5-CARBONITRILE, GLYCEROL, Queuine tRNA-ribosyltransferase, ...
Authors:Tidten, N, Brenk, R, Heine, A, Reuter, K, Klebe, G.
Deposit date:2007-07-04
Release date:2007-07-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Glutamate versus glutamine exchange swaps substrate selectivity in tRNA-guanine transglycosylase: insight into the regulation of substrate selectivity by kinetic and crystallographic studies.
J.Mol.Biol., 374, 2007
2QEJ
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BU of 2qej by Molmil
Crystal structure of a Staphylococcus aureus protein (SSL7) in complex with Fc of human IgA1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GLYCEROL, ...
Authors:Ramsland, P.A, Willoughby, N, Trist, H.M, Farrugia, W, Hogarth, P.M, Fraser, J.D, Wines, B.D.
Deposit date:2007-06-26
Release date:2007-09-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for evasion of IgA immunity by Staphylococcus aureus revealed in the complex of SSL7 with Fc of human IgA1
Proc.Natl.Acad.Sci.Usa, 104, 2007
5H3J
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BU of 5h3j by Molmil
Crystal structure of Grasp domain of Grasp55 complexed with the Golgin45 C-terminus
Descriptor: Golgi reassembly-stacking protein 2, Golgin-45, ZINC ION
Authors:Shi, N, Zhao, J, Li, B.
Deposit date:2016-10-25
Release date:2017-01-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Structural Basis for the Interaction between Golgi Reassembly-stacking Protein GRASP55 and Golgin45
J. Biol. Chem., 292, 2017
2QH3
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BU of 2qh3 by Molmil
Solution structure of the U64 H/ACA snoRNA 3' terminal hairpin loop
Descriptor: Human U64 H/ACA snoRNA
Authors:Feigon, J, Theimer, C.A, Chim, N, Breece, K.E.
Deposit date:2007-06-29
Release date:2007-09-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural and functional characterization of human telomerase RNA processing and cajal body localization signals.
Mol.Cell, 27, 2007
2QJ6
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BU of 2qj6 by Molmil
Crystal structure analysis of a 14 repeat C-terminal fragment of toxin TcdA in Clostridium difficile
Descriptor: Toxin A
Authors:Albesa-Jove, D, Bertrand, T, Carpenter, L, Lim, J, Brown, K.A, Fairweather, N.
Deposit date:2007-07-06
Release date:2008-07-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Solution and crystal structures of the cell binding domain of toxins TcdA and TcdB from Clostridium difficile
To be Published
5H3L
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BU of 5h3l by Molmil
Structure of methylglyoxal synthase crystallised as a contaminant
Descriptor: FORMIC ACID, Methylglyoxal synthase
Authors:Hatti, K, Dadireddy, V, Srinivasan, N, Ramakumar, S, Murthy, M.R.N.
Deposit date:2016-10-25
Release date:2016-11-09
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure determination of contaminant proteins using the MarathonMR procedure.
J. Struct. Biol., 197, 2017
5ZG8
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BU of 5zg8 by Molmil
Crystal Structure of TtNRS
Descriptor: Asparagine--tRNA ligase
Authors:Mutharasappan, N, Jain, V, Sharma, A, Manickam, Y, Jeyaraman, J.
Deposit date:2018-03-08
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of TtNRS
To be published
5ZH5
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BU of 5zh5 by Molmil
CRYSTAL STRUCTURE OF PfKRS WITH INHIBITOR CLADO-2
Descriptor: (3S)-6,8-dihydroxy-3-{[(2R,6S)-6-methyloxan-2-yl]methyl}-3,4-dihydro-1H-2-benzopyran-1-one, CHLORIDE ION, LYSINE, ...
Authors:Babbar, P, Malhotra, N, Sharma, M, Harlos, K, Reddy, D.S, Manickam, Y, Sharma, A.
Deposit date:2018-03-11
Release date:2018-06-27
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Specific Stereoisomeric Conformations Determine the Drug Potency of Cladosporin Scaffold against Malarial Parasite
J. Med. Chem., 61, 2018
5GAF
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BU of 5gaf by Molmil
RNC in complex with SRP
Descriptor: 1A9L SS, 23S ribosomal RNA, 50S ribosomal protein L10, ...
Authors:Jomaa, A, Boehringer, D, Leibundgut, M, Ban, N.
Deposit date:2015-11-25
Release date:2016-02-03
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structures of the E. coli translating ribosome with SRP and its receptor and with the translocon
Nat Commun, 7, 2016
5ZIM
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BU of 5zim by Molmil
Crystal structure of bacteriorhodopsin at 1.25 A resolution
Descriptor: 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, RETINAL
Authors:Hasegawa, N, Jonotsuka, H, Miki, K, Takeda, K.
Deposit date:2018-03-16
Release date:2018-10-10
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:X-ray structure analysis of bacteriorhodopsin at 1.3 angstrom resolution.
Sci Rep, 8, 2018
2QM9
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BU of 2qm9 by Molmil
Troglitazone Bound to Fatty Acid Binding Protein 4
Descriptor: (5R)-5-(4-{[(2R)-6-HYDROXY-2,5,7,8-TETRAMETHYL-3,4-DIHYDRO-2H-CHROMEN-2-YL]METHOXY}BENZYL)-1,3-THIAZOLIDINE-2,4-DIONE, Fatty acid-binding protein, adipocyte, ...
Authors:Gillilan, R.E, Ayers, S.D, Noy, N.
Deposit date:2007-07-14
Release date:2007-10-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural Basis for Activation of Fatty Acid-binding Protein 4
J.Mol.Biol., 372, 2007
3VRY
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BU of 3vry by Molmil
Crystal structure of HCK complexed with a pyrrolo-pyrimidine inhibitor 4-Amino-5-(4-phenoxyphenyl)-7H-pyrrolo[2,3-d]pyrimidin-7-yl-cyclopentane
Descriptor: 4-Amino-5-(4-phenoxyphenyl)-7H-pyrrolo[2,3-d]pyrimidin-7-yl-cyclopentane, CALCIUM ION, CHLORIDE ION, ...
Authors:Kuratani, M, Tomabechi, Y, Niwa, H, Handa, N, Yokoyama, S.
Deposit date:2012-04-21
Release date:2013-05-01
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.481 Å)
Cite:A Pyrrolo-Pyrimidine Derivative Targets Human Primary AML Stem Cells in Vivo
Sci Transl Med, 5, 2013
2QPS
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BU of 2qps by Molmil
"Sugar tongs" mutant Y380A in complex with acarbose
Descriptor: Alpha-amylase type A isozyme, CALCIUM ION
Authors:Aghajari, N, Jensen, M.H, Tranier, S, Haser, R.
Deposit date:2007-07-25
Release date:2008-02-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The 'pair of sugar tongs' site on the non-catalytic domain C of barley alpha-amylase participates in substrate binding and activity
Febs J., 274, 2007
5GKZ
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BU of 5gkz by Molmil
Structure of RyR1 in a closed state (C3 conformer)
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP1A, Ryanodine receptor 1, ZINC ION
Authors:Bai, X.C, Yan, Z, Wu, J.P, Yan, N.
Deposit date:2016-07-07
Release date:2016-08-24
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4 Å)
Cite:The Central domain of RyR1 is the transducer for long-range allosteric gating of channel opening
Cell Res., 26, 2016
5IED
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BU of 5ied by Molmil
Murine endoplasmic reticulum alpha-glucosidase II with castanospermine
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Caputo, A.T, Roversi, P, Alonzi, D.S, Kiappes, J.L, Zitzmann, N.
Deposit date:2016-02-25
Release date:2016-07-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structures of mammalian ER alpha-glucosidase II capture the binding modes of broad-spectrum iminosugar antivirals.
Proc.Natl.Acad.Sci.USA, 113, 2016
5Z25
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BU of 5z25 by Molmil
Trimeric Alpha-Helix-Inserted Circular Permutant of Cytochrome c555
Descriptor: Cytochrome c552, HEME C, TETRAETHYLENE GLYCOL
Authors:Oda, A, Nagao, S, Yamanaka, M, Ueda, I, Shibata, N, Higuchi, Y, Hirota, S.
Deposit date:2017-12-28
Release date:2018-03-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Construction of a Triangle-Shaped Trimer and a Tetrahedron Using an alpha-Helix-Inserted Circular Permutant of Cytochrome c555.
Chem Asian J, 13, 2018
2VCK
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BU of 2vck by Molmil
Structure of Phycoerythrobilin Synthase PebS from the Cyanophage P-SSM2 in Complex with the bound Substrate Biliverdin IXa
Descriptor: BILIVERDINE IX ALPHA, CYANOBACTERIAL PHYCOERYTHROBILIN
Authors:Dammeyer, T, Hofmann, E, Frankenberg-Dinkel, N.
Deposit date:2007-09-25
Release date:2008-08-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Phycoerythrobilin Synthase (Pebs) of a Marine Virus: Crystal Structures of the Biliverdin Complex and the Substrate-Free Form.
J.Biol.Chem., 283, 2008
5ZH2
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BU of 5zh2 by Molmil
CRYSTAL STRUCTURE OF PfKRS WITH INHIBITOR CLADO-5
Descriptor: (3R)-6,8-dihydroxy-3-{[(2R,6R)-6-methyloxan-2-yl]methyl}-3,4-dihydro-1H-2-benzopyran-1-one, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, CHLORIDE ION, ...
Authors:Babbar, P, Malhotra, N, Sharma, M, Harlos, K, Reddy, D.S, Manickam, Y, Sharma, A.
Deposit date:2018-03-11
Release date:2018-06-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Specific Stereoisomeric Conformations Determine the Drug Potency of Cladosporin Scaffold against Malarial Parasite
J. Med. Chem., 61, 2018
2VDD
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BU of 2vdd by Molmil
Crystal Structure of the Open State of TolC Outer Membrane Component of Mutlidrug Efflux Pumps
Descriptor: CHLORIDE ION, OUTER MEMBRANE PROTEIN TOLC, POTASSIUM ION
Authors:Bavro, V.N, Pietras, Z, Furnham, N, Perez-Cano, L, Fernandez-Recio, J, Pei, X.Y, Truer, R, Misra, R, Luisi, B.
Deposit date:2007-10-04
Release date:2008-04-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Assembly and Channel Opening in a Bacterial Drug Efflux Machine.
Mol.Cell, 30, 2008
2VGW
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BU of 2vgw by Molmil
Crystal structure of E53QbsSHMT obtained in the presence of glycine and 5-fomyl tetrahydrofolate
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCINE, PHOSPHATE ION, ...
Authors:Rajaram, V, Bhavani, B.S, Kaul, P, Prakash, V, Appaji Rao, N, Savithri, H.S, Murthy, M.R.N.
Deposit date:2007-11-15
Release date:2007-12-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structure Determination and Biochemical Studies on Bacillus Stearothermophilus E53Q Serine Hydroxymethyltransferase and its Complexes Provide Insights on Function and Enzyme Memory
FEBS J., 274, 2007
5ZJQ
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BU of 5zjq by Molmil
Structure of AbdB/Exd complex bound to a 'Red14' DNA sequence
Descriptor: DNA (5'-D(*GP*CP*AP*TP*GP*AP*TP*TP*TP*AP*TP*GP*AP*C)-3'), DNA (5'-D(*GP*TP*CP*AP*TP*AP*AP*AP*TP*CP*AP*TP*GP*C)-3'), Homeobox protein abdominal-B, ...
Authors:Baburajendran, N, Zeiske, T, Kaczynska, A, Mann, R, Honig, B, Shapiro, L, Palmer, A.G.
Deposit date:2018-03-22
Release date:2018-08-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.443 Å)
Cite:Intrinsic DNA Shape Accounts for Affinity Differences between Hox-Cofactor Binding Sites.
Cell Rep, 24, 2018
2VG9
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Crystal structure of Loop Swap mutant of Necallimastix patriciarum Xyn11A
Descriptor: ACETATE ION, BIFUNCTIONAL ENDO-1,4-BETA-XYLANASE A, CADMIUM ION
Authors:Vardakou, M, Dumon, C, Flint, J.E, Murray, J.W, Christakopoulos, P, Weiner, D.P, Juge, N, Lewis, R.J, Gilbert, H.J.
Deposit date:2007-11-09
Release date:2007-12-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Understanding the Structural Basis for Substrate and Inhibitor Recognition in Eukaryotic Gh11 Xylanases.
J.Mol.Biol., 375, 2008

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