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PDB: 91 件

4V3P
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The molecular structure of the left-handed supra-molecular helix of eukaryotic polyribosomes
分子名称: 18S ribosomal RNA, 26S ribosomal RNA, 40S WHEAT GERM RIBOSOME protein 4, ...
著者Myasnikov, A.G, Afonina, Z.A, Menetret, J.F, Shirokov, V.A, Spirin, A.S, Klaholz, B.P.
登録日2014-10-20
公開日2015-04-22
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (34 Å)
主引用文献The molecular structure of the left-handed supra-molecular helix of eukaryotic polyribosomes.
Nat Commun, 5, 2014
5LKS
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Structure-function insights reveal the human ribosome as a cancer target for antibiotics
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ...
著者Myasnikov, A.G, Natchiar, S.K, Nebout, M, Hazemann, I, Imbert, V, Khatter, H, Peyron, J.-F, Klaholz, B.P.
登録日2016-07-23
公開日2017-04-26
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure-function insights reveal the human ribosome as a cancer target for antibiotics.
Nat Commun, 7, 2016
7LHT
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Structure of the LRRK2 dimer
分子名称: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, Leucine-rich repeat serine/threonine-protein kinase 2
著者Myasnikov, A, Zhu, H, Hixson, P, Xie, B, Yu, K, Pitre, A, Peng, J, Sun, J.
登録日2021-01-26
公開日2021-06-16
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural analysis of the full-length human LRRK2.
Cell, 184, 2021
7LHW
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Structure of the LRRK2 monomer
分子名称: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, Leucine-rich repeat serine/threonine-protein kinase 2
著者Myasnikov, A, Zhu, H, Hixson, P, Xie, B, Yu, K, Pitre, A, Peng, J, Sun, J.
登録日2021-01-26
公開日2021-06-16
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural analysis of the full-length human LRRK2.
Cell, 184, 2021
7LI3
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Structure of the LRRK2 G2019S mutant
分子名称: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, Leucine-rich repeat serine/threonine-protein kinase 2
著者Myasnikov, A, Zhu, H, Hixson, P, Xie, B, Yu, K, Pitre, A, Peng, J, Sun, J.
登録日2021-01-26
公開日2021-06-16
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural analysis of the full-length human LRRK2.
Cell, 184, 2021
7LI4
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Structure of LRRK2 after symmetry expansion
分子名称: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, Leucine-rich repeat serine/threonine-protein kinase 2
著者Myasnikov, A, Zhu, H, Hixson, P, Xie, B, Yu, K, Pitre, A, Peng, J, Sun, J.
登録日2021-01-26
公開日2021-06-16
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural analysis of the full-length human LRRK2.
Cell, 184, 2021
7LVK
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Cfr-modified 50S subunit from Escherichia coli
分子名称: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
著者Stojkovic, V, Myasnikov, A.G, Frost, A, Fujimori, D.G.
登録日2021-02-25
公開日2021-12-15
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Investigating antibiotic resistance of a ribosomal-RNA methylating enzyme through directed evolution
To Be Published
8FWK
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CryoEM structure of Human ABCB6 Transporter
分子名称: ATP-binding cassette sub-family B member 6
著者Shaik, M.M, Myasnikov, A.
登録日2023-01-22
公開日2023-02-08
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献CryoEM structure of Human ABCB6 Transporter
To Be Published
3J4J
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BU of 3j4j by Molmil
Model of full-length T. thermophilus Translation Initiation Factor 2 refined against its cryo-EM density from a 30S Initiation Complex map
分子名称: Translation initiation factor IF-2
著者Simonetti, A, Marzi, S, Billas, I.M.L, Tsai, A, Fabbretti, A, Myasnikov, A, Roblin, P, Vaiana, A.C, Hazemann, I, Eiler, D, Steitz, T.A, Puglisi, J.D, Gualerzi, C.O, Klaholz, B.P.
登録日2013-08-26
公開日2013-09-25
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (11.5 Å)
主引用文献Involvement of protein IF2 N domain in ribosomal subunit joining revealed from architecture and function of the full-length initiation factor.
Proc.Natl.Acad.Sci.USA, 110, 2013
7QO9
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SARS-CoV-2 S Omicron Spike B.1.1.529 - RBD and NTD (Local)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,SARS-CoV-2 S Omicron Spike B.1.1.529, ...
著者Ni, D, Lau, K, Turelli, P, Beckert, B, Nazarov, S, Pojer, F, Myasnikov, A, Stahlberg, H, Trono, D.
登録日2021-12-23
公開日2022-01-26
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.88 Å)
主引用文献Structural analysis of the Spike of the Omicron SARS-COV-2 variant by cryo-EM and implications for immune evasion
Biorxiv, 2021
6QZP
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BU of 6qzp by Molmil
High-resolution cryo-EM structure of the human 80S ribosome
分子名称: (3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine, 18S rRNA (1740-MER), 28S rRNA (3773-MER), ...
著者Natchiar, S.K, Myasnikov, A.G, Kratzat, H, Hazemann, I, Klaholz, B.P.
登録日2019-03-12
公開日2019-04-24
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Visualization of chemical modifications in the human 80S ribosome structure.
Nature, 551, 2017
2VAZ
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Model of the S15-mRNA complex fitted into the cryo-EM map of the 70S entrapment complex.
分子名称: 30S RIBOSOMAL PROTEIN S15, RPSO MRNA OPERATOR
著者Marzi, S, Myasnikov, A.G, Serganov, A, Ehresmann, C, Romby, P, Yusupov, M, Klaholz, B.P.
登録日2007-09-05
公開日2007-10-02
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Structured Mrnas Regulate Translation Initiation by Binding to the Platform of the Ribosome.
Cell(Cambridge,Mass.), 130, 2007
7QO7
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BU of 7qo7 by Molmil
SARS-CoV-2 S Omicron Spike B.1.1.529
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Ni, D, Lau, K, Turelli, P, Beckert, B, Nazarov, S, Pojer, F, Myasnikov, A, Stahlberg, H, Trono, D.
登録日2021-12-23
公開日2022-01-19
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.02 Å)
主引用文献Structural analysis of the Spike of the Omicron SARS-COV-2 variant by cryo-EM and implications for immune evasion
Biorxiv, 2021
1ML5
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BU of 1ml5 by Molmil
Structure of the E. coli ribosomal termination complex with release factor 2
分子名称: 30S 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
著者Klaholz, B.P, Pape, T, Zavialov, A.V, Myasnikov, A.G, Orlova, E.V, Vestergaard, B, Ehrenberg, M, van Heel, M.
登録日2002-08-30
公開日2003-01-14
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (14 Å)
主引用文献Structure of the Escherichia coli ribosomal termination complex with release factor 2
Nature, 421, 2003
8RQB
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Cryo-EM structure of mouse heavy-chain apoferritin
分子名称: FE (III) ION, Ferritin heavy chain, N-terminally processed, ...
著者Nazarov, S, Myasnikov, A, Stahlberg, H.
登録日2024-01-17
公開日2024-03-13
最終更新日2024-10-02
実験手法ELECTRON MICROSCOPY (1.09 Å)
主引用文献Low-dose cryo-electron ptychography of proteins at sub-nanometer resolution.
Nat Commun, 15, 2024
6BQR
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Human TRPM4 ion channel in lipid nanodiscs in a calcium-free state
分子名称: CHOLESTEROL HEMISUCCINATE, Transient receptor potential cation channel subfamily M member 4
著者Autzen, H.E, Myasnikov, A.G, Campbell, M.G, Asarnow, D, Julius, D, Cheng, Y.
登録日2017-11-28
公開日2017-12-20
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure of the human TRPM4 ion channel in a lipid nanodisc.
Science, 359, 2018
6BQV
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Human TRPM4 ion channel in lipid nanodiscs in a calcium-bound state
分子名称: CALCIUM ION, CHOLESTEROL HEMISUCCINATE, Transient receptor potential cation channel subfamily M member 4
著者Autzen, H.E, Myasnikov, A.G, Campbell, M.G, Asarnow, D, Julius, D, Cheng, Y.
登録日2017-11-28
公開日2017-12-20
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure of the human TRPM4 ion channel in a lipid nanodisc.
Science, 359, 2018
6PJ6
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BU of 6pj6 by Molmil
High resolution cryo-EM structure of E.coli 50S
分子名称: 23S rRNA, 50S ribosomal protein L11, 50S ribosomal protein L13, ...
著者Stojkovic, V, Myasnikov, A, Frost, A, Fujimori, D.G.
登録日2019-06-27
公開日2020-01-22
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Assessment of the nucleotide modifications in the high-resolution cryo-electron microscopy structure of the Escherichia coli 50S subunit.
Nucleic Acids Res., 48, 2020
8EAL
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BU of 8eal by Molmil
SsoMCM hexamer bound to Mg/ADP-BeFx and DNA. Class 1. Merged particles from datasets with 3 different DNA entities
分子名称: DNA, MAGNESIUM ION, Minichromosome maintenance protein MCM, ...
著者Meagher, M, Myasnikov, A, Enemark, E.J.
登録日2022-08-29
公開日2022-12-14
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.34 Å)
主引用文献Two Distinct Modes of DNA Binding by an MCM Helicase Enable DNA Translocation.
Int J Mol Sci, 23, 2022
8EAI
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SsoMCM hexamer bound to Mg/ADP-BeFx and 16-mer oligo-dT. Class 2
分子名称: 16-mer oligo-dT, MAGNESIUM ION, Minichromosome maintenance protein MCM, ...
著者Meagher, M, Myasnikov, A, Enemark, E.J.
登録日2022-08-29
公開日2022-12-14
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献Two Distinct Modes of DNA Binding by an MCM Helicase Enable DNA Translocation.
Int J Mol Sci, 23, 2022
8EAK
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BU of 8eak by Molmil
SsoMCM hexamer bound to Mg/ADP-BeFx and 46-mer DNA strand. Class 2
分子名称: 46-mer DNA, MAGNESIUM ION, Minichromosome maintenance protein MCM, ...
著者Meagher, M, Myasnikov, A, Enemark, E.J.
登録日2022-08-29
公開日2022-12-14
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.67 Å)
主引用文献Two Distinct Modes of DNA Binding by an MCM Helicase Enable DNA Translocation.
Int J Mol Sci, 23, 2022
8EAM
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SsoMCM hexamer bound to Mg/ADP-BeFx and DNA. Class 2. Merged particles from datasets with 3 different DNA entities
分子名称: DNA, MAGNESIUM ION, Minichromosome maintenance protein MCM, ...
著者Meagher, M, Myasnikov, A, Enemark, E.J.
登録日2022-08-29
公開日2022-12-14
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.59 Å)
主引用文献Two Distinct Modes of DNA Binding by an MCM Helicase Enable DNA Translocation.
Int J Mol Sci, 23, 2022
8EAJ
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BU of 8eaj by Molmil
SsoMCM hexamer bound to Mg/ADP-BeFx and 46-mer DNA strand. Class 1
分子名称: 46-mer DNA strand, MAGNESIUM ION, Minichromosome maintenance protein MCM, ...
著者Meagher, M, Myasnikov, A, Enemark, E.J.
登録日2022-08-29
公開日2022-12-14
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.45 Å)
主引用文献Two Distinct Modes of DNA Binding by an MCM Helicase Enable DNA Translocation.
Int J Mol Sci, 23, 2022
8EAH
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BU of 8eah by Molmil
SsoMCM hexamer bound to Mg/ADP-BeFx and 16-mer oligo-dT. Class 1
分子名称: 16-mer oligo-dT, MAGNESIUM ION, Minichromosome maintenance protein MCM, ...
著者Meagher, M, Myasnikov, A, Enemark, E.J.
登録日2022-08-29
公開日2022-12-14
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.48 Å)
主引用文献Two Distinct Modes of DNA Binding by an MCM Helicase Enable DNA Translocation.
Int J Mol Sci, 23, 2022
8EAF
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BU of 8eaf by Molmil
SsoMCM hexamer bound to Mg/ADP-BeFx and 12-mer oligo-dT. Class 1
分子名称: 12-mer oligo dT, MAGNESIUM ION, Minichromosome maintenance protein MCM, ...
著者Meagher, M, Myasnikov, A, Enemark, E.J.
登録日2022-08-29
公開日2022-12-14
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.62 Å)
主引用文献Two Distinct Modes of DNA Binding by an MCM Helicase Enable DNA Translocation.
Int J Mol Sci, 23, 2022

 

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