Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 209 件

3QZL
DownloadVisualize
BU of 3qzl by Molmil
Staphylococcus aureus IsdA NEAT domain K75A variant in complex with heme
分子名称: GLYCEROL, Iron-regulated surface determinant protein A, PROTOPORPHYRIN IX CONTAINING FE
著者Grigg, J.C, Mao, C.X, Murphy, M.E.P.
登録日2011-03-06
公開日2011-08-31
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Iron-Coordinating Tyrosine Is a Key Determinant of NEAT Domain Heme Transfer.
J.Mol.Biol., 413, 2011
4HOV
DownloadVisualize
BU of 4hov by Molmil
DypB N246A in complex with manganese
分子名称: CHLORIDE ION, DypB, FORMIC ACID, ...
著者Grigg, J.C, Singh, R, Eltis, L.D, Murphy, M.E.P.
登録日2012-10-22
公開日2013-01-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Improved Manganese-Oxidizing Activity of DypB, a Peroxidase from a Lignolytic Bacterium.
Acs Chem.Biol., 8, 2013
1SNR
DownloadVisualize
BU of 1snr by Molmil
Nitric oxide bound to Cu nitrite reductase
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (I) ION, ...
著者Tocheva, E.I, Rosell, F.I, Mauk, A.G, Murphy, M.E.
登録日2004-03-11
公開日2004-06-22
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Side-on copper-nitrosyl coordination by nitrite reductase.
Science, 304, 2004
3NRP
DownloadVisualize
BU of 3nrp by Molmil
Crystal structure of 'as isolated' uropathogenic E. coli strain F11 FetP recombinantly expressed in the periplasm of E. coli BL21(DE3)
分子名称: Periplasmic protein-probably involved in high-affinity Fe2+ transport
著者Chan, A.C.K, Murphy, M.E.P.
登録日2010-06-30
公開日2011-05-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Characterization of a Dipartite Iron Uptake System from Uropathogenic Escherichia coli Strain F11.
J.Biol.Chem., 286, 2011
3NRQ
DownloadVisualize
BU of 3nrq by Molmil
Crystal structure of copper-reconstituted FetP from uropathogenic Escherichia coli strain F11
分子名称: COPPER (II) ION, Periplasmic protein-probably involved in high-affinity Fe2+ transport
著者Chan, A.C.K, Murphy, M.E.P.
登録日2010-06-30
公開日2011-05-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Characterization of a Dipartite Iron Uptake System from Uropathogenic Escherichia coli Strain F11.
J.Biol.Chem., 286, 2011
3LGM
DownloadVisualize
BU of 3lgm by Molmil
Crystal structure of reduced IsdI in complex with heme
分子名称: Heme-degrading monooxygenase isdI, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE
著者Ukpabi, G.N, Murphy, M.E.P.
登録日2010-01-20
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献The IsdG-family of haem oxygenases degrades haem to a novel chromophore
Mol.Microbiol., 75, 2010
3LGN
DownloadVisualize
BU of 3lgn by Molmil
Crystal structure of IsdI in complex with heme
分子名称: Heme-degrading monooxygenase isdI, MAGNESIUM ION, OXYGEN MOLECULE, ...
著者Ukpabi, G.N, Murphy, M.E.P.
登録日2010-01-20
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The IsdG-family of haem oxygenases degrades haem to a novel chromophore
Mol.Microbiol., 75, 2010
1D4N
DownloadVisualize
BU of 1d4n by Molmil
HUMAN SERUM TRANSFERRIN
分子名称: CARBONATE ION, FE (III) ION, TRANSFERRIN
著者Yang, H.-W, MacGillivray, R.T.A, Chen, J, Luo, Y, Wang, Y, Brayer, G.D, Mason, A, Woodworth, R.C, Murphy, M.E.P.
登録日1999-10-04
公開日2000-03-01
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of two mutants (K206Q, H207E) of the N-lobe of human transferrin with increased affinity for iron.
Protein Sci., 9, 2000
1D3K
DownloadVisualize
BU of 1d3k by Molmil
HUMAN SERUM TRANSFERRIN
分子名称: CARBONATE ION, FE (III) ION, SERUM TRANSFERRIN
著者Yang, H.-W, MacGillivray, R.T.A, Chen, J, Luo, Y, Wang, Y, Brayer, G.D, Mason, A, Woodworth, R.C, Murphy, M.E.P.
登録日1999-09-29
公開日2000-03-01
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of two mutants (K206Q, H207E) of the N-lobe of human transferrin with increased affinity for iron.
Protein Sci., 9, 2000
4FNI
DownloadVisualize
BU of 4fni by Molmil
Crystal structure of IsdI-W66Y in complex with heme and cyanide
分子名称: CYANIDE ION, Heme-degrading monooxygenase isdI, MAGNESIUM ION, ...
著者Ukpabi, G.N, Murphy, M.E.P.
登録日2012-06-19
公開日2012-08-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Inactivation of the heme degrading enzyme IsdI by an active site substitution that diminishes heme ruffling.
J.Biol.Chem., 287, 2012
4FNH
DownloadVisualize
BU of 4fnh by Molmil
Crystal structure of IsdI-W66Y in complex with heme
分子名称: Heme-degrading monooxygenase isdI, PROTOPORPHYRIN IX CONTAINING FE
著者Ukpabi, G.N, Murphy, M.E.P.
登録日2012-06-19
公開日2012-08-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Inactivation of the heme degrading enzyme IsdI by an active site substitution that diminishes heme ruffling.
J.Biol.Chem., 287, 2012
5TWB
DownloadVisualize
BU of 5twb by Molmil
Oxidoreductase IruO in the reduced form
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase, GLYCEROL
著者Kobylarz, M.J, Heieis, G.A, Loutet, S.A, Murphy, M.E.P.
登録日2016-11-12
公開日2017-10-04
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.822 Å)
主引用文献Iron Uptake Oxidoreductase (IruO) Uses a Flavin Adenine Dinucleotide Semiquinone Intermediate for Iron-Siderophore Reduction.
ACS Chem. Biol., 12, 2017
5TWC
DownloadVisualize
BU of 5twc by Molmil
Oxidoreductase IruO in the oxidized form
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase
著者Kobylarz, M.J, Heieis, G.A, Loutet, S.A, Murphy, M.E.P.
登録日2016-11-12
公開日2017-10-04
最終更新日2020-01-08
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Iron Uptake Oxidoreductase (IruO) Uses a Flavin Adenine Dinucleotide Semiquinone Intermediate for Iron-Siderophore Reduction.
ACS Chem. Biol., 12, 2017
3QGP
DownloadVisualize
BU of 3qgp by Molmil
Crystal structure of IsdI in complex with heme and cyanide
分子名称: CYANIDE ION, Heme-degrading monooxygenase isdI, MAGNESIUM ION, ...
著者Ukpabi, G.N, Murphy, M.E.P.
登録日2011-01-24
公開日2011-07-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Heme Ruffling Enables the Catalytic Activity of the Heme Degrading Enzyme IsdI
To be Published
4OND
DownloadVisualize
BU of 4ond by Molmil
Ancestral Steroid Receptor 2 DBD helix mutant - ERE DNA complex
分子名称: 5'-D(*CP*CP*AP*GP*GP*TP*CP*AP*GP*AP*GP*TP*GP*AP*CP*CP*TP*G)-3', 5'-D(*TP*CP*AP*GP*GP*TP*CP*AP*CP*TP*CP*TP*GP*AP*CP*CP*TP*G)-3', Ancestral SR2 Helix Mutant, ...
著者Ortlund, E.O, Murphy, M.N.
登録日2014-01-28
公開日2014-10-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.253 Å)
主引用文献Evolution of DNA specificity in a transcription factor family produced a new gene regulatory module.
Cell(Cambridge,Mass.), 159, 2014
2Q8P
DownloadVisualize
BU of 2q8p by Molmil
Crystal Structure of selenomethionine labelled S. aureus IsdE complexed with heme
分子名称: Iron-regulated surface determinant E, PROTOPORPHYRIN IX CONTAINING FE
著者Grigg, J.C, Murphy, M.E.
登録日2007-06-11
公開日2007-07-31
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Heme Coordination by Staphylococcus aureus IsdE.
J.Biol.Chem., 282, 2007
4OOR
DownloadVisualize
BU of 4oor by Molmil
Ancestral Steroid Receptor 2 DNA binding domain in complex with a steroid response element
分子名称: 5'-D(*CP*CP*AP*GP*AP*AP*CP*AP*GP*AP*GP*TP*GP*TP*TP*CP*TP*G)-3', 5'-D(*TP*CP*AP*GP*AP*AP*CP*AP*CP*TP*CP*TP*GP*TP*TP*CP*TP*G)-3', Ancestral Steroid Receptor 2 DNA binding domain, ...
著者Ortlund, E.O, Murphy, M.N.
登録日2014-02-03
公開日2014-10-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献Evolution of DNA specificity in a transcription factor family produced a new gene regulatory module.
Cell(Cambridge,Mass.), 159, 2014
4OLN
DownloadVisualize
BU of 4oln by Molmil
Ancestral Steroid Receptor 1 in complex with estrogen response element DNA
分子名称: 5'-D(*CP*CP*AP*GP*GP*TP*CP*AP*GP*AP*GP*TP*GP*AP*CP*CP*TP*GP*A)-3', 5'-D(*TP*CP*AP*GP*GP*TP*CP*AP*CP*TP*CP*TP*GP*AP*CP*CP*TP*GP*G)-3', AncSR1, ...
著者Ortlund, E.O, Murphy, M.N.
登録日2014-01-24
公開日2014-10-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Evolution of DNA specificity in a transcription factor family produced a new gene regulatory module.
Cell(Cambridge,Mass.), 159, 2014
2OWS
DownloadVisualize
BU of 2ows by Molmil
Crystal structure of Bordetella pertussis holo ferric binding protein bound with two synergistic oxalate anions
分子名称: FE (III) ION, OXALATE ION, Putative iron binding protein
著者Tom-Yew, S.A.L, Murphy, M.E.P.
登録日2007-02-16
公開日2008-02-26
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Anion-dependent hinge motion in ferric binding proteins
To be Published
2Q8Q
DownloadVisualize
BU of 2q8q by Molmil
Crystal Structure of S. aureus IsdE complexed with heme
分子名称: Iron-regulated surface determinant E, PROTOPORPHYRIN IX CONTAINING FE
著者Grigg, J.C, Murphy, M.E.
登録日2007-06-11
公開日2007-07-31
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Heme Coordination by Staphylococcus aureus IsdE.
J.Biol.Chem., 282, 2007
5TO3
DownloadVisualize
BU of 5to3 by Molmil
Crystal structure of thrombin mutant W215A/E217A fused to EGF456 of thrombomodulin via a 31-residue linker and bound to PPACK
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-4)-alpha-D-mannopyranose-(1-4)-[beta-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, ...
著者Barranco-Medina, S, Murphy, M, Pelc, L, Chen, Z, Di Cera, E, Pozzi, N.
登録日2016-10-16
公開日2017-03-29
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Rational Design of Protein C Activators.
Sci Rep, 7, 2017
2OWT
DownloadVisualize
BU of 2owt by Molmil
Crystal structure of Bordetella pertussis holo ferric binding protein with bound synergistic carbonate anion
分子名称: CARBONATE ION, FE (III) ION, Putative iron binding protein
著者Tom-Yew, S.A.L, Murphy, M.E.P.
登録日2007-02-16
公開日2008-02-26
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Anion-dependent hinge motion in ferric binding proteins
To be Published
4R5K
DownloadVisualize
BU of 4r5k by Molmil
Crystal structure of the DnaK C-terminus (Dnak-SBD-B)
分子名称: CALCIUM ION, Chaperone protein DnaK, SULFATE ION
著者Leu, J.I, Zhang, P, Murphy, M.E, Marmorstein, R, George, D.L.
登録日2014-08-21
公開日2014-09-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.7469 Å)
主引用文献Structural Basis for the Inhibition of HSP70 and DnaK Chaperones by Small-Molecule Targeting of a C-Terminal Allosteric Pocket.
Acs Chem.Biol., 9, 2014
4PO2
DownloadVisualize
BU of 4po2 by Molmil
Crystal Structure of the Stress-Inducible Human Heat Shock Protein HSP70 Substrate-Binding Domain in Complex with Peptide Substrate
分子名称: HSP70 substrate peptide, Heat shock 70 kDa protein 1A/1B, PHOSPHATE ION, ...
著者Zhang, P, Leu, J.I, Murphy, M.E, George, D.L, Marmorstein, R.
登録日2014-02-24
公開日2014-08-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the stress-inducible human heat shock protein 70 substrate-binding domain in complex with Peptide substrate.
Plos One, 9, 2014
4M54
DownloadVisualize
BU of 4m54 by Molmil
The structure of the staphyloferrin B precursor biosynthetic enzyme SbnB bound to N-(1-amino-1-carboxyl-2-ethyl)-glutamic acid and NADH
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, CHLORIDE ION, N-[(2S)-2-amino-2-carboxyethyl]-L-glutamic acid, ...
著者Kobylarz, M.J, Murphy, M.E.P.
登録日2013-08-07
公開日2014-07-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Synthesis of L-2,3-diaminopropionic acid, a siderophore and antibiotic precursor.
Chem.Biol., 21, 2014

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon