Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 34 results

6E7L
DownloadVisualize
BU of 6e7l by Molmil
Structure of a dimerized UUCG motif
Descriptor: RNA (5'-R(*GP*GP*GP*CP*UP*GP*CP*AP*CP*UP*UP*CP*GP*GP*UP*GP*CP*UP*GP*CP*CP*C)-3')
Authors:Montemayor, E.J, Butcher, S.E.
Deposit date:2018-07-26
Release date:2019-07-31
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structure of an RNA helix with pyrimidine mismatches and cross-strand stacking.
Acta Crystallogr.,Sect.F, 75, 2019
4N0T
DownloadVisualize
BU of 4n0t by Molmil
Core structure of the U6 small nuclear ribonucleoprotein at 1.7 Angstrom resolution
Descriptor: SULFATE ION, U4/U6 snRNA-associated-splicing factor PRP24, U6 snRNA
Authors:Montemayor, E.J, Curran, E.C, Liao, H, Andrews, K.L, Treba, C.N, Butcher, S.E, Brow, D.A.
Deposit date:2013-10-02
Release date:2014-05-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Core structure of the U6 small nuclear ribonucleoprotein at 1.7- angstrom resolution.
Nat.Struct.Mol.Biol., 21, 2014
6ASO
DownloadVisualize
BU of 6aso by Molmil
Structure of yeast U6 snRNP with 3'-phosphate terminated U6 RNA
Descriptor: MAGNESIUM ION, MANGANESE (II) ION, POTASSIUM ION, ...
Authors:Montemayor, E.J, Brow, D.A, Butcher, S.E.
Deposit date:2017-08-25
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Architecture of the U6 snRNP reveals specific recognition of 3'-end processed U6 snRNA.
Nat Commun, 9, 2018
6XL0
DownloadVisualize
BU of 6xl0 by Molmil
Caulobacter crescentus FljK filament
Descriptor: Flagellin
Authors:Montemayor, E.J, Ploscariu, N.T, Sanchez, J.C, Parrell, D, Dillard, R.S, Shebelut, C.W, Ke, Z, Guerrero-Ferreira, R.C, Wright, E.R.
Deposit date:2020-06-27
Release date:2020-12-23
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Flagellar Structures from the Bacterium Caulobacter crescentus and Implications for Phage phi CbK Predation of Multiflagellin Bacteria
J.Bacteriol., 203, 2021
6XKY
DownloadVisualize
BU of 6xky by Molmil
Caulobacter crescentus FljK filament, straightened
Descriptor: Flagellin
Authors:Montemayor, E.J, Ploscariu, N.T, Sanchez, J.C, Parrell, D, Dillard, R.S, Shebelut, C.W, Ke, Z, Guerrero-Ferreira, R.C, Wright, E.R.
Deposit date:2020-06-27
Release date:2020-12-23
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Flagellar Structures from the Bacterium Caulobacter crescentus and Implications for Phage phi CbK Predation of Multiflagellin Bacteria
J.Bacteriol., 203, 2021
3BJ7
DownloadVisualize
BU of 3bj7 by Molmil
Spermine/spermidine N1-acetyltransferase from mouse: Crystal structure of a ternary complex reveals solvent-mediated spermine binding
Descriptor: COENZYME A, Diamine acetyltransferase 1
Authors:Montemayor, E.J.
Deposit date:2007-12-03
Release date:2008-09-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of spermidine/spermine N1-acetyltransferase in complex with spermine provides insights into substrate binding and catalysis.
Biochemistry, 47, 2008
3BJ8
DownloadVisualize
BU of 3bj8 by Molmil
Spermine/spermidine N1-acetyltransferase from mouse: Crystal structure of a ternary complex reveals solvent-mediated spermine binding
Descriptor: COENZYME A, Diamine acetyltransferase 1, SPERMINE
Authors:Montemayor, E.J, Hoffman, D.W.
Deposit date:2007-12-03
Release date:2008-09-16
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of spermidine/spermine N1-acetyltransferase in complex with spermine provides insights into substrate binding and catalysis.
Biochemistry, 47, 2008
5VSU
DownloadVisualize
BU of 5vsu by Molmil
Structure of yeast U6 snRNP with 2'-phosphate terminated U6 RNA
Descriptor: Saccharomyces cerevisiae strain T8 chromosome XII sequence, U4/U6 snRNA-associated-splicing factor PRP24, U6 snRNA-associated Sm-like protein LSm2, ...
Authors:Montemayor, E.J.
Deposit date:2017-05-12
Release date:2018-05-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Architecture of the U6 snRNP reveals specific recognition of 3'-end processed U6 snRNA.
Nat Commun, 9, 2018
5V1M
DownloadVisualize
BU of 5v1m by Molmil
Structure of human Usb1 with uridine 5'-monophosphate
Descriptor: CHLORIDE ION, GLYCEROL, U6 snRNA phosphodiesterase, ...
Authors:Montemayor, E.J, Didychuk, A.L, Butcher, S.E.
Deposit date:2017-03-02
Release date:2017-08-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Usb1 controls U6 snRNP assembly through evolutionarily divergent cyclic phosphodiesterase activities.
Nat Commun, 8, 2017
5TF6
DownloadVisualize
BU of 5tf6 by Molmil
Structure and conformational plasticity of the U6 small nuclear ribonucleoprotein core
Descriptor: CHLORIDE ION, GLYCEROL, POTASSIUM ION, ...
Authors:Montemayor, E.J, Brow, D.A, Butcher, S.E.
Deposit date:2016-09-24
Release date:2017-01-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and conformational plasticity of the U6 small nuclear ribonucleoprotein core.
Acta Crystallogr D Struct Biol, 73, 2017
6PPN
DownloadVisualize
BU of 6ppn by Molmil
Structure of S. pombe Lsm2-8 with unprocessed U6 snRNA
Descriptor: Mimic of unprocessed U6 snRNA, Probable U6 snRNA-associated Sm-like protein LSm3, Probable U6 snRNA-associated Sm-like protein LSm4, ...
Authors:Montemayor, E.J, Butcher, S.E.
Deposit date:2019-07-08
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Molecular basis for the distinct cellular functions of the Lsm1-7 and Lsm2-8 complexes.
Rna, 26, 2020
6PPQ
DownloadVisualize
BU of 6ppq by Molmil
Structure of S. pombe Lsm1-7 with RNA, polyuridine with 3' adenosine
Descriptor: Probable U6 snRNA-associated Sm-like protein LSm3, Probable U6 snRNA-associated Sm-like protein LSm4, RNA (5'-R(*UP*UP*UP*UP*UP*A)-3'), ...
Authors:Montemayor, E.J, Butcher, S.E.
Deposit date:2019-07-08
Release date:2020-06-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Molecular basis for the distinct cellular functions of the Lsm1-7 and Lsm2-8 complexes.
Rna, 26, 2020
6PPV
DownloadVisualize
BU of 6ppv by Molmil
Structure of S. pombe Lsm1-7 with RNA, polyuridine with 3' guanosine
Descriptor: Probable U6 snRNA-associated Sm-like protein LSm3, Probable U6 snRNA-associated Sm-like protein LSm4, RNA (5'-R(*AP*UP*UP*UP*UP*G)-3'), ...
Authors:Montemayor, E.J, Butcher, S.E.
Deposit date:2019-07-08
Release date:2020-06-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Molecular basis for the distinct cellular functions of the Lsm1-7 and Lsm2-8 complexes.
Rna, 26, 2020
6PPP
DownloadVisualize
BU of 6ppp by Molmil
Structure of S. pombe Lsm2-8 with processed U6 snRNA
Descriptor: Mimic of processed U6 snRNA, Probable U6 snRNA-associated Sm-like protein LSm3, Probable U6 snRNA-associated Sm-like protein LSm4, ...
Authors:Montemayor, E.J, Butcher, S.E.
Deposit date:2019-07-08
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Molecular basis for the distinct cellular functions of the Lsm1-7 and Lsm2-8 complexes.
Rna, 26, 2020
4PEF
DownloadVisualize
BU of 4pef by Molmil
Dbr1 in complex with sulfate
Descriptor: GLYCEROL, MANGANESE (II) ION, RNA lariat debranching enzyme, ...
Authors:Montemayor, E.J, Katolik, A, Clark, N.E, Taylor, A.B, Schuermann, J.P, Combs, D.J, Johnsson, R, Holloway, S.P, Stevens, S.W, Damha, M.J, Hart, P.J.
Deposit date:2014-04-23
Release date:2014-08-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural basis of lariat RNA recognition by the intron debranching enzyme Dbr1.
Nucleic Acids Res., 42, 2014
4PEI
DownloadVisualize
BU of 4pei by Molmil
Dbr1 in complex with synthetic branched RNA analog
Descriptor: GLYCEROL, NICKEL (II) ION, RNA (5'-R(*(G46)P*U)-3'), ...
Authors:Montemayor, E.J, Katolik, A, Clark, N.E, Taylor, A.B, Schuermann, J.P, Combs, D.J, Johnsson, R, Holloway, S.P, Stevens, S.W, Damha, M.J, Hart, P.J.
Deposit date:2014-04-23
Release date:2014-08-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis of lariat RNA recognition by the intron debranching enzyme Dbr1.
Nucleic Acids Res., 42, 2014
4PEG
DownloadVisualize
BU of 4peg by Molmil
Dbr1 in complex with guanosine-5'-monophosphate
Descriptor: GLYCEROL, GUANOSINE-5'-MONOPHOSPHATE, MANGANESE (II) ION, ...
Authors:Montemayor, E.J, Katolik, A, Clark, N.E, Taylor, A.B, Schuermann, J.P, Combs, D.J, Johnsson, R, Holloway, S.P, Stevens, S.W, Damha, M.J, Hart, P.J.
Deposit date:2014-04-23
Release date:2014-08-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of lariat RNA recognition by the intron debranching enzyme Dbr1.
Nucleic Acids Res., 42, 2014
4PEH
DownloadVisualize
BU of 4peh by Molmil
Dbr1 in complex with synthetic linear RNA
Descriptor: GLYCEROL, MANGANESE (II) ION, RNA (5'-R(*CP*UP*AP*(A2P)P*AP*CP*AP*A)-3'), ...
Authors:Montemayor, E.J, Katolik, A, Clark, N.E, Taylor, A.B, Schuermann, J.P, Combs, D.J, Johnsson, R, Holloway, S.P, Stevens, S.W, Damha, M.J, Hart, P.J.
Deposit date:2014-04-23
Release date:2014-08-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of lariat RNA recognition by the intron debranching enzyme Dbr1.
Nucleic Acids Res., 42, 2014
2N7M
DownloadVisualize
BU of 2n7m by Molmil
NMR-SAXS/WAXS Structure of the core of the U4/U6 di-snRNA
Descriptor: RNA (92-MER)
Authors:Cornilescu, G, Didychuk, A.L, Rodgers, M.L, Michael, L.A, Burke, J.E, Montemayor, E.J, Hoskins, A.A, Butcher, S.E, Tonelli, M.
Deposit date:2015-09-14
Release date:2015-12-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Analysis of Multi-Helical RNAs by NMR-SAXS/WAXS: Application to the U4/U6 di-snRNA.
J.Mol.Biol., 428, 2016
6D2Z
DownloadVisualize
BU of 6d2z by Molmil
Structure of human Usb1 with uridine-adenosine, inactive H208Q mutant
Descriptor: 5'-R(UP*A)-3'), CHLORIDE ION, U6 snRNA phosphodiesterase
Authors:Nomura, Y, Montemayor, E.J, Butcher, S.E.
Deposit date:2018-04-14
Release date:2018-09-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Structural and mechanistic basis for preferential deadenylation of U6 snRNA by Usb1.
Nucleic Acids Res., 46, 2018
6D31
DownloadVisualize
BU of 6d31 by Molmil
Structure of human Usb1 with adenosine 5'-monophosphate
Descriptor: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, GLYCEROL, ...
Authors:Nomura, Y, Montemayor, E.J, Butcher, S.E.
Deposit date:2018-04-14
Release date:2018-09-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural and mechanistic basis for preferential deadenylation of U6 snRNA by Usb1.
Nucleic Acids Res., 46, 2018
5UQJ
DownloadVisualize
BU of 5uqj by Molmil
Structure of yeast Usb1
Descriptor: ACETATE ION, GLYCEROL, SULFATE ION, ...
Authors:Didychuk, A.L, Montemayor, E.J, Butcher, S.E.
Deposit date:2017-02-08
Release date:2017-08-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Usb1 controls U6 snRNP assembly through evolutionarily divergent cyclic phosphodiesterase activities.
Nat Commun, 8, 2017
6D30
DownloadVisualize
BU of 6d30 by Molmil
Structure of human Usb1 with uridine-uridine, inactive H208Q mutant
Descriptor: CHLORIDE ION, RNA (5'-R(UP*U)-3'), U6 snRNA phosphodiesterase
Authors:Nomura, Y, Montemayor, E.J, Butcher, S.E.
Deposit date:2018-04-14
Release date:2018-09-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Structural and mechanistic basis for preferential deadenylation of U6 snRNA by Usb1.
Nucleic Acids Res., 46, 2018
8UXJ
DownloadVisualize
BU of 8uxj by Molmil
Caulobacter crescentus FljK flagellar filament (asymmetrical)
Descriptor: Flagellin FljK
Authors:Sanchez, J.C, Montemayor, E.J, Ploscariu, N.T, Parrell, D, Baumgardt, J.K, Yang, J.E, Sibert, B, Cai, K, Wright, E.R.
Deposit date:2023-11-09
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (2.71 Å)
Cite:Atomic-level architecture of Caulobacter crescentus flagellar filaments provide evidence for multi-flagellin filament stabilization
To Be Published
8UXN
DownloadVisualize
BU of 8uxn by Molmil
Caulobacter crescentus FljM flagellar filament (symmetrized)
Descriptor: Flagellin FljM
Authors:Sanchez, J.C, Montemayor, E.J, Ploscariu, N.T, Parrell, D, Baumgardt, J.K, Yang, J.E, Sibert, B, Cai, K, Wright, E.R.
Deposit date:2023-11-09
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (2.11 Å)
Cite:Direct evidence for multi-flagellin filament stabilization via atomic-level architecture of Caulobacter crescentus flagellar filaments
To Be Published

 

12>

227561

PDB entries from 2024-11-20

PDB statisticsPDBj update infoContact PDBjnumon