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PDB: 63 results

9ER3
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BU of 9er3 by Molmil
Cyanide dihydratase from Bacillus pumilus C1 E155R variant with altered helical twist.
Descriptor: Cyanide dihydratase
Authors:Dlamini, L.S, Woodward, J.D, Sewell, B.T.
Deposit date:2024-03-22
Release date:2024-04-10
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cyanide dihydratase from Bacillus pumilus C1 E155R variant with altered helical twist
To Be Published
1HQM
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CRYSTAL STRUCTURE OF THERMUS AQUATICUS CORE RNA POLYMERASE-INCLUDES COMPLETE STRUCTURE WITH SIDE-CHAINS (EXCEPT FOR DISORDERED REGIONS)-FURTHER REFINED FROM ORIGINAL DEPOSITION-CONTAINS ADDITIONAL SEQUENCE INFORMATION
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Minakhin, L, Bhagat, S, Brunning, A, Campbell, E.A, Darst, S.A, Ebright, R.H, Severinov, K.
Deposit date:2000-12-18
Release date:2001-02-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Bacterial RNA polymerase subunit omega and eukaryotic RNA polymerase subunit RPB6 are sequence, structural, and functional homologs and promote RNA polymerase assembly.
Proc.Natl.Acad.Sci.USA, 98, 2001
5ZLZ
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BU of 5zlz by Molmil
Structure of tPA and PAI-1
Descriptor: GLYCEROL, Plasminogen activator inhibitor 1, Tissue-type plasminogen activator
Authors:Min, L, Huang, M.
Deposit date:2018-03-31
Release date:2019-04-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.581 Å)
Cite:Development of a PAI-1 trapping agent (PAItrap2) based on inactivated tPA-SPD and the crystal structure of PAItrap2 in complex with PAI-1
To Be Published
6AEX
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Crystal structure of unoccupied murine uPAR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Urokinase plasminogen activator surface receptor
Authors:Min, L, Huang, M.
Deposit date:2018-08-06
Release date:2019-07-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.393 Å)
Cite:Crystal structure of the unoccupied murine urokinase-type plasminogen activator receptor (uPAR) reveals a tightly packed DII-DIII unit.
Febs Lett., 593, 2019
4H6Q
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BU of 4h6q by Molmil
Structure of oxidized Deinococcus radiodurans proline dehydrogenase complexed with L-tetrahydrofuroic acid
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, Proline dehydrogenase, ...
Authors:Min, L, Tanner, J.J.
Deposit date:2012-09-19
Release date:2012-11-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.359 Å)
Cite:Crystal structures and kinetics of monofunctional proline dehydrogenase provide insight into substrate recognition and conformational changes associated with flavin reduction and product release.
Biochemistry, 51, 2012
4H6R
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BU of 4h6r by Molmil
Structure of reduced Deinococcus radiodurans proline dehydrogenase
Descriptor: ACETATE ION, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, Proline dehydrogenase
Authors:Min, L, Tanner, J.J.
Deposit date:2012-09-19
Release date:2012-11-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structures and kinetics of monofunctional proline dehydrogenase provide insight into substrate recognition and conformational changes associated with flavin reduction and product release.
Biochemistry, 51, 2012
5NLC
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BU of 5nlc by Molmil
Structure of PipY, the COG0325 family member of Synechococcus elongatus PCC7942,without PLP
Descriptor: PHOSPHATE ION, PipY
Authors:Tremino, L, Forcada-Nadal, A, Contreras, A, Rubio, V.
Deposit date:2017-04-04
Release date:2017-09-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Studies on cyanobacterial protein PipY shed light on structure, potential functions, and vitamin B6 -dependent epilepsy.
FEBS Lett., 591, 2017
6GDW
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BU of 6gdw by Molmil
Structure of CutA from Synechococcus elongatus PCC7942 complexed with 2 molecules of Bis-Tris
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Periplasmic divalent cation tolerance protein
Authors:Tremino, L, Rubio, V.
Deposit date:2018-04-24
Release date:2019-05-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Functional and structural characterization of PII-like protein CutA does not support involvement in heavy metal tolerance and hints at a small-molecule carrying/signaling role.
Febs J., 2020
6GDV
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BU of 6gdv by Molmil
Structure of CutA from Synechococcus elongatus PCC7942 complexed with Bis-Tris molecule
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Periplasmic divalent cation tolerance protein
Authors:Tremino, L, Rubio, V.
Deposit date:2018-04-24
Release date:2019-05-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Functional and structural characterization of PII-like protein CutA does not support involvement in heavy metal tolerance and hints at a small-molecule carrying/signaling role.
Febs J., 2020
6GDX
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BU of 6gdx by Molmil
Structure of CutA from Synechococcus elongatus PCC7942 complexed with 3 molecules of Bis-Tris
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Periplasmic divalent cation tolerance protein
Authors:Tremino, L, Rubio, V.
Deposit date:2018-04-24
Release date:2019-05-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Functional and structural characterization of PII-like protein CutA does not support involvement in heavy metal tolerance and hints at a small-molecule carrying/signaling role.
Febs J., 2020
6GDU
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BU of 6gdu by Molmil
Structure of CutA from Synechococcus elongatus PCC7942
Descriptor: Periplasmic divalent cation tolerance protein
Authors:Tremino, L, Rubio, V.
Deposit date:2018-04-24
Release date:2019-05-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Functional and structural characterization of PII-like protein CutA does not support involvement in heavy metal tolerance and hints at a small-molecule carrying/signaling role.
Febs J., 2020
5NM8
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BU of 5nm8 by Molmil
Structure of PipY, the COG0325 family member of Synechococcus elongatus PCC7942, with PLP bound
Descriptor: CALCIUM ION, PYRIDOXAL-5'-PHOSPHATE, PipY
Authors:Tremino, L, Forcada-Nadal, A, Contreras, A, Rubio, V.
Deposit date:2017-04-05
Release date:2017-09-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Studies on cyanobacterial protein PipY shed light on structure, potential functions, and vitamin B6 -dependent epilepsy.
FEBS Lett., 591, 2017
6J92
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BU of 6j92 by Molmil
Crystal structure of acetolactate decarboxylase from Enterbacter aerogenes
Descriptor: Alpha-acetolactate decarboxylase, CHLORIDE ION, ZINC ION
Authors:Mingyang, L, Song, X, Ji, F, Feng, Y.
Deposit date:2019-01-21
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.421 Å)
Cite:Crystal structure of acetolactate decarboxylase from Enterbacter aerogenes
To Be Published
8K7A
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BU of 8k7a by Molmil
Cryo-EM structure of nucleotide-bound ComA E647Q mutant with Mg2+
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Transport/processing ATP-binding protein ComA
Authors:Yu, L, Xin, X, Min, L.
Deposit date:2023-07-26
Release date:2023-10-11
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural basis of peptide secretion for Quorum sensing by ComA.
Nat Commun, 14, 2023
8K4B
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BU of 8k4b by Molmil
Cryo-EM structure of nucleotide-bound ComA with ZinC ion
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Competence factor transporting ATP-binding protein/permease ComA, ZINC ION
Authors:Yu, L, Xin, X, Min, L, Feng, H.
Deposit date:2023-07-17
Release date:2023-10-11
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis of peptide secretion for Quorum sensing by ComA.
Nat Commun, 14, 2023
6L2S
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BU of 6l2s by Molmil
IlvC, a ketol-acid reductoisomerase, from Streptococcus pneumoniae_D83G
Descriptor: Ketol-acid reductoisomerase (NADP(+))
Authors:Gyuhee, K, Donghyuk, S, Sumin, L, Jaesook, Y, Sangho, L.
Deposit date:2019-10-06
Release date:2020-08-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystal Structure of IlvC, a Ketol-Acid Reductoisomerase, from Streptococcus Pneumoniae.
Crystals, 9, 2019
6L2R
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BU of 6l2r by Molmil
IlvC, a ketol-acid reductoisomerase, from Streptococcus pneumoniae_E195S
Descriptor: Ketol-acid reductoisomerase (NADP(+))
Authors:Gyuhee, K, Donghyuk, S, Sumin, L, Jaesook, Y, Sangho, L.
Deposit date:2019-10-06
Release date:2020-08-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal Structure of IlvC, a Ketol-Acid Reductoisomerase, from Streptococcus Pneumoniae.
Crystals, 9, 2019
8HF6
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BU of 8hf6 by Molmil
Cryo-EM structure of nucleotide-bound ComA E647Q mutant
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Competence factor transporting ATP-binding protein/permease ComA
Authors:Yu, L, Xin, X, Min, L.
Deposit date:2022-11-09
Release date:2023-10-04
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of peptide secretion for Quorum sensing by ComA.
Nat Commun, 14, 2023
8HF4
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BU of 8hf4 by Molmil
Cryo-EM structure of nucleotide-bound ComA at outward-facing state with EC gate closed conformation
Descriptor: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transport/processing ATP-binding protein ComA
Authors:Yu, L, Xin, X, Min, L.
Deposit date:2022-11-09
Release date:2023-10-04
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis of peptide secretion for Quorum sensing by ComA.
Nat Commun, 14, 2023
8HF7
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BU of 8hf7 by Molmil
Cryo-EM structure of ComA bound to its mature substrate CSP peptide
Descriptor: Competence factor transporting ATP-binding protein/permease ComA, Competence-stimulating peptide type 1
Authors:Yu, L, Xin, X, Min, L.
Deposit date:2022-11-09
Release date:2023-10-11
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis of peptide secretion for Quorum sensing by ComA.
Nat Commun, 14, 2023
8I6Q
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BU of 8i6q by Molmil
Cryo-EM structure of Pseudomonas aeruginosa FtsE(WT)X complex in peptidisc
Descriptor: Cell division ATP-binding protein FtsE, Cell division protein FtsX
Authors:Xin, X, Jianwei, L, Min, L.
Deposit date:2023-01-29
Release date:2023-06-07
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (4.23 Å)
Cite:Mechanistic insights into the regulation of cell wall hydrolysis by FtsEX and EnvC at the bacterial division site.
Proc.Natl.Acad.Sci.USA, 120, 2023
8HF5
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BU of 8hf5 by Molmil
Cryo-EM structure of nucleotide-bound ComA at outward-facing state with EC gate open conformation
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transport/processing ATP-binding protein ComA
Authors:Yu, L, Xin, X, Min, L.
Deposit date:2022-11-09
Release date:2023-10-04
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis of peptide secretion for Quorum sensing by ComA.
Nat Commun, 14, 2023
7XK8
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BU of 7xk8 by Molmil
Cryo-EM structure of the Neuromedin U receptor 2 (NMUR2) in complex with G Protein and its endogeneous Peptide-Agonist NMU25
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Zhao, W, Wenru, Z, Mu, W, Minmin, L, Shutian, C, Tingting, T, Gisela, S, Holger, W, Albert, B, Cuiying, Y, Xiaojing, C, Han, S, Wu, B, Zhao, Q.
Deposit date:2022-04-19
Release date:2023-02-22
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Ligand recognition and activation of neuromedin U receptor 2.
Nat Commun, 13, 2022
3D2M
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Crystal structure of N-acetylglutamate synthase from Neisseria gonorrhoeae complexed with coenzyme A and L-glutamate
Descriptor: COENZYME A, GLUTAMIC ACID, Putative acetylglutamate synthase
Authors:Shi, D, Min, L, Jin, Z, Allewell, N.M, Tuchman, M.
Deposit date:2008-05-08
Release date:2008-12-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Mechanism of Allosteric Inhibition of N-Acetyl-L-glutamate Synthase by L-Arginine.
J.Biol.Chem., 284, 2009
3D2P
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BU of 3d2p by Molmil
Crystal structure of N-acetylglutamate synthase from Neisseria gonorrhoeae complexed with coenzyme A and L-arginine
Descriptor: ARGININE, COENZYME A, Putative acetylglutamate synthase
Authors:Shi, D, Min, L, Jin, Z, Allewell, N.M, Tuchman, M.
Deposit date:2008-05-08
Release date:2008-12-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Mechanism of Allosteric Inhibition of N-Acetyl-L-glutamate Synthase by L-Arginine.
J.Biol.Chem., 284, 2009

 

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