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PDB: 88 件
1R1C
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PSEUDOMONAS AERUGINOSA W48F/Y72F/H83Q/Y108W-AZURIN RE(PHEN)(CO)3(HIS107)
分子名称: (1,10 PHENANTHROLINE)-(TRI-CARBON MONOXIDE) RHENIUM (I), Azurin, COPPER (I) ION
著者Miller, J.E, Gradinaru, C, Crane, B.R, Di Bilio, A.J.
登録日2003-09-23
公開日2003-09-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Spectroscopy and reactivity of a photogenerated tryptophan radical in a structurally defined protein environment
J.Am.Chem.Soc., 125, 2003
4BVN
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Ultra-thermostable beta1-adrenoceptor with cyanopindolol bound
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID, 4-{[(2S)-3-(tert-butylamino)-2-hydroxypropyl]oxy}-3H-indole-2-carbonitrile, ...
著者Miller, J, Nehme, R, Warne, T, Edwards, P.C, Leslie, A.G.W, Schertler, G, Tate, C.G.
登録日2013-06-26
公開日2014-04-02
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The 2.1 A Resolution Structure of Cyanopindolol-Bound Beta1- Adrenoceptor Identifies an Intramembrane Na+ Ion that Stabilises the Ligand-Free Receptor.
Plos One, 9, 2014
4R7Y
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Crystal structure of an active MCM hexamer
分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
著者Miller, J.M, Arachea, B.T, Epling, L.B, Enemark, E.J.
登録日2014-08-28
公開日2014-10-08
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Analysis of the crystal structure of an active MCM hexamer.
Elife, 3, 2014
8T0B
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BU of 8t0b by Molmil
Novel Domain of Unknown Function Solved with AlphaFold
分子名称: DUF1842 domain-containing protein
著者Miller, J.E, Cascio, D, Sawaya, M.R, Yeates, T.O.
登録日2023-05-31
公開日2024-01-17
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献AlphaFold-assisted structure determination of a bacterial protein of unknown function using X-ray and electron crystallography.
Acta Crystallogr D Struct Biol, 80, 2024
8T1N
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Micro-ED Structure of a Novel Domain of Unknown Function Solved with AlphaFold
分子名称: DUF1842 domain-containing protein
著者Miller, J.E, Cascio, D, Sawaya, M.R, Cannon, K.A, Rodriguez, J.A, Yeates, T.O.
登録日2023-06-02
公開日2024-01-17
最終更新日2024-04-10
実験手法ELECTRON CRYSTALLOGRAPHY (3 Å)
主引用文献AlphaFold-assisted structure determination of a bacterial protein of unknown function using X-ray and electron crystallography.
Acta Crystallogr D Struct Biol, 80, 2024
8T1M
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BU of 8t1m by Molmil
Novel Domain of Unknown Function Solved with AlphaFold
分子名称: DUF1842 domain-containing protein
著者Miller, J.E, Agdanowski, M.P, Cascio, D, Sawaya, M.R, Yeates, T.O.
登録日2023-06-02
公開日2024-01-17
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献AlphaFold-assisted structure determination of a bacterial protein of unknown function using X-ray and electron crystallography.
Acta Crystallogr D Struct Biol, 80, 2024
2IOU
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BU of 2iou by Molmil
Major Tropism Determinant P1 (Mtd-P1) Variant Complexed with Bordetella brochiseptica Virulence Factor Pertactin extracellular domain (Prn-E).
分子名称: MAGNESIUM ION, Major Tropism Determinant P1, Pertactin Extracellular Domain
著者Miller, J.L, Ghosh, P.
登録日2006-10-10
公開日2007-10-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.16 Å)
主引用文献Selective Ligand Recognition by a Diversity-Generating Retroelement Variable Protein
Plos Biol., 6, 2008
4R7Z
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PfMCM-AAA double-octamer
分子名称: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 21, MAGNESIUM ION
著者Miller, J.M, Arachea, B.T, Epling, L.B, Enemark, E.J.
登録日2014-08-28
公開日2014-10-08
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Analysis of the crystal structure of an active MCM hexamer.
Elife, 3, 2014
1JK2
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Zif268 D20A mutant bound to the GCT DNA site
分子名称: 5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*TP*G)-3', 5'-D(*TP*CP*AP*GP*CP*CP*CP*AP*CP*GP*C)-3', ZIF268, ...
著者Miller, J.C, Pabo, C.O.
登録日2001-07-11
公開日2001-10-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Rearrangement of side-chains in a Zif268 mutant highlights the complexities of zinc finger-DNA recognition.
J.Mol.Biol., 313, 2001
1JK1
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Zif268 D20A Mutant Bound to WT DNA Site
分子名称: 5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*GP*G)-3', 5'-D(*TP*CP*CP*GP*CP*CP*CP*AP*CP*GP*C)-3', ZIF268, ...
著者Miller, J.C, Pabo, C.O.
登録日2001-07-11
公開日2001-10-19
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Rearrangement of side-chains in a Zif268 mutant highlights the complexities of zinc finger-DNA recognition.
J.Mol.Biol., 313, 2001
7L0B
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BU of 7l0b by Molmil
Crystal structure of hydroxyacyl glutathione hydrolase (GloB) from Staphylococcus aureus, apoenzyme
分子名称: Hydroxyacylglutathione hydrolase, SULFATE ION, ZINC ION
著者Miller, J.J, Jez, J.M, Odom John, A.R.
登録日2020-12-11
公開日2020-12-30
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure-guided microbial targeting of antistaphylococcal prodrugs.
Elife, 10, 2021
7L0A
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BU of 7l0a by Molmil
Crystal structure of s-formylglutathione hydrolase (FrmB) from Staphylococcus aureus, apoenzyme
分子名称: Esterase family protein, MAGNESIUM ION
著者Miller, J.J, Jez, J.M, Odom John, A.R.
登録日2020-12-11
公開日2020-12-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure-guided microbial targeting of antistaphylococcal prodrugs.
Elife, 10, 2021
1QMD
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BU of 1qmd by Molmil
calcium bound closed form alpha-toxin from Clostridium perfringens
分子名称: CALCIUM ION, PHOSPHOLIPASE C, ZINC ION
著者Naylor, C.E, Miller, J, Titball, R.W, Basak, A.K.
登録日1999-09-27
公開日2000-02-06
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Characterisation of the Calcium-Binding C-Terminal Domain of Clostridium Perfringens Alpha-Toxin
J.Mol.Biol., 294, 1999
1QM6
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BU of 1qm6 by Molmil
Closed form of Clostridium perfringens alpha-toxin strain NCTC8237
分子名称: PHOSPHOLIPASE C, ZINC ION
著者Naylor, C.E, Miller, J, Titball, R.W, Basak, A.K.
登録日1999-09-21
公開日1999-09-27
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Characterisation of the Calcium-Binding C-Terminal Domain of Clostridium Perfringens Alpha-Toxin
J.Mol.Biol., 294, 1999
7LJH
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BU of 7ljh by Molmil
Structure of poly(aspartic acid) hydrolase PahZ2 with Zn+2 bound
分子名称: Poly(Aspartic acid) hydrolase, ZINC ION
著者Brambley, C.A, Yared, T.J, Gonzalez, M, Jansch, A.L, Wallen, J.R, Weiland, M.H, Miller, J.M.
登録日2021-01-29
公開日2021-12-08
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Sphingomonas sp. KT-1 PahZ2 Structure Reveals a Role for Conformational Dynamics in Peptide Bond Hydrolysis.
J.Phys.Chem.B, 125, 2021
7LJI
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BU of 7lji by Molmil
Structure of poly(aspartic acid) hydrolase PahZ2 with Gd+3 bound
分子名称: GADOLINIUM ION, Poly(Aspartic acid) hydrolase
著者Brambley, C.A, Yared, T.J, Gonzalez, M, Jansch, A.L, Wallen, J.R, Weiland, M.H, Miller, J.M.
登録日2021-01-29
公開日2021-12-08
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Sphingomonas sp. KT-1 PahZ2 Structure Reveals a Role for Conformational Dynamics in Peptide Bond Hydrolysis.
J.Phys.Chem.B, 125, 2021
6U5B
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CryoEM Structure of Pyocin R2 - precontracted - baseplate
分子名称: Glue PA0627, Ripcord PA0626, Sheath Initiator PA0617, ...
著者Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
登録日2019-08-27
公開日2020-04-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6U5K
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CryoEM Structure of Pyocin R2 - postcontracted - baseplate
分子名称: Glue PA0627, Sheath Initiator PA0617, Sheath PA0622, ...
著者Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
登録日2019-08-27
公開日2020-04-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6U5F
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BU of 6u5f by Molmil
CryoEM Structure of Pyocin R2 - precontracted - collar
分子名称: Collar PA0615, Sheath PA0622, Tube PA0623
著者Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
登録日2019-08-27
公開日2020-04-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6U5H
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CryoEM Structure of Pyocin R2 - precontracted - hub
分子名称: Probable bacteriophage protein Pyocin R2
著者Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
登録日2019-08-27
公開日2020-04-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
3UWK
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BU of 3uwk by Molmil
Structure Guided Development of Novel Thymidine Mimetics targeting Pseudomonas aeruginosa Thymidylate Kinase: from Hit to Lead Generation
分子名称: 1-methyl-6-phenyl-1,3-dihydro-2H-imidazo[4,5-b]pyridin-2-one, MAGNESIUM ION, Thymidylate kinase
著者Choi, J.Y, Plummer, M.S, Starr, J, Desbonnet, C.R, Soutter, H.H, Chang, J, Miller, J.R, Dillman, K, Miller, A.A, Roush, W.R.
登録日2011-12-02
公開日2012-02-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Structure guided development of novel thymidine mimetics targeting Pseudomonas aeruginosa thymidylate kinase: from hit to lead generation.
J.Med.Chem., 55, 2012
3UWO
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Structure Guided Development of Novel Thymidine Mimetics targeting Pseudomonas aeruginosa Thymidylate Kinase: from Hit to Lead Generation
分子名称: 3-(1-methyl-2-oxo-2,3-dihydro-1H-imidazo[4,5-b]pyridin-6-yl)benzamide, Thymidylate kinase
著者Choi, J.Y, Plummer, M.S, Starr, J, Desbonnet, C.R, Soutter, H.H, Chang, J, Miller, J.R, Dillman, K, Miller, A.A, Roush, W.R.
登録日2011-12-02
公開日2012-02-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure guided development of novel thymidine mimetics targeting Pseudomonas aeruginosa thymidylate kinase: from hit to lead generation.
J.Med.Chem., 55, 2012
3UXM
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Structure Guided Development of Novel Thymidine Mimetics targeting Pseudomonas aeruginosa Thymidylate Kinase: from Hit to Lead Generation
分子名称: 5'-deoxy-5'-fluorothymidine, MAGNESIUM ION, Thymidylate kinase
著者Choi, J.Y, Plummer, M.S, Starr, J, Desbonnet, C.R, Soutter, H.H, Chang, J, Miller, J.R, Dillman, K, Miller, A.A, Roush, W.R.
登録日2011-12-05
公開日2012-02-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure guided development of novel thymidine mimetics targeting Pseudomonas aeruginosa thymidylate kinase: from hit to lead generation.
J.Med.Chem., 55, 2012
5IOO
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Accommodation of massive sequence variation in Nanoarchaeota by the C-type lectin fold
分子名称: AvpA, MAGNESIUM ION
著者Handa, S, Paul, B, Miller, J, Valentine, D, Ghosh, P.
登録日2016-03-08
公開日2016-11-09
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.521 Å)
主引用文献Conservation of the C-type lectin fold for accommodating massive sequence variation in archaeal diversity-generating retroelements.
Bmc Struct.Biol., 16, 2016
5NFZ
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TUBULIN-MTC complex
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-methoxy-5-(2,3,4-trimethoxyphenyl)cyclohepta-2,4,6-trien-1-one, CALCIUM ION, ...
著者Field, J.J, Pera, B, Estevez Gallego, J, Calvo, E, Rodriguez-Salarichs, J, Saez-Calvo, G, Zuwerra, D, Jordi, M, Prota, A.E, Menchon, G, Miller, J.H, Altmann, K.-H, Diaz, J.F.
登録日2017-03-16
公開日2017-10-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Zampanolide Binding to Tubulin Indicates Cross-Talk of Taxane Site with Colchicine and Nucleotide Sites.
J. Nat. Prod., 81, 2018

 

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