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PDB: 174 results

6IU7
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Crystal structure of importin-alpha1 bound to the 53BP1 nuclear localization signal (wild-type)
Descriptor: Importin subunit alpha-1, Peptide from TP53-binding protein 1
Authors:Matsuura, Y.
Deposit date:2018-11-27
Release date:2019-01-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and biochemical characterization of the recognition of the 53BP1 nuclear localization signal by importin-alpha.
Biochem. Biophys. Res. Commun., 510, 2019
6IUA
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Crystal structure of importin-alpha1 bound to the 53BP1 nuclear localization signal (S1678D)
Descriptor: Importin subunit alpha-1, Peptide from TP53-binding protein 1
Authors:Matsuura, Y.
Deposit date:2018-11-27
Release date:2019-01-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and biochemical characterization of the recognition of the 53BP1 nuclear localization signal by importin-alpha.
Biochem. Biophys. Res. Commun., 510, 2019
8HKW
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Crystal structure of importin-alpha3 bound to the 53BP1 nuclear localization signal
Descriptor: Importin subunit alpha-3, Peptide from TP53-binding protein 1
Authors:Matsuura, Y.
Deposit date:2022-11-28
Release date:2022-12-21
Last modified:2023-03-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic data of an importin-alpha 3 dimer in which the two protomers are bridged by a bipartite nuclear localization signal.
Data Brief, 47, 2023
8HE0
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Crystal structure of importin-alpha1 bound to the HIF-1alpha nuclear localization signal (wild-type)
Descriptor: Hypoxia-inducible factor 1-alpha, Importin subunit alpha-1
Authors:Matsuura, Y.
Deposit date:2022-11-07
Release date:2023-02-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of importin-alpha bound to the wild-type and an internal deletion mutant of the bipartite nuclear localization signal of HIF-1 alpha.
Biochem.Biophys.Res.Commun., 652, 2023
8HE3
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Crystal structure of importin-alpha1 bound to the HIF-1alpha nuclear localization signal (delta 724-751)
Descriptor: Hypoxia-inducible factor 1-alpha, Importin subunit alpha-1, SULFATE ION
Authors:Matsuura, Y.
Deposit date:2022-11-07
Release date:2023-02-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of importin-alpha bound to the wild-type and an internal deletion mutant of the bipartite nuclear localization signal of HIF-1 alpha.
Biochem.Biophys.Res.Commun., 652, 2023
6KC4
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Crystal structure of human Fer SH2 domain bound to a phosphopeptide (DEpYENVD)
Descriptor: Tyrosine-protein kinase Fer, phosphopeptide (EDpYENVD)
Authors:Matsuura, Y.
Deposit date:2019-06-27
Release date:2019-09-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:High-resolution structural analysis shows how different crystallographic environments can induce alternative modes of binding of a phosphotyrosine peptide to the SH2 domain of Fer tyrosine kinase.
Protein Sci., 28, 2019
1C0G
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CRYSTAL STRUCTURE OF 1:1 COMPLEX BETWEEN GELSOLIN SEGMENT 1 AND A DICTYOSTELIUM/TETRAHYMENA CHIMERA ACTIN (MUTANT 228: Q228K/T229A/A230Y/E360H)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, PROTEIN (CHIMERIC ACTIN), ...
Authors:Matsuura, Y, Stewart, M, Kawamoto, M, Kamiya, N, Saeki, K, Yasunaga, T, Wakabayashi, T.
Deposit date:1999-07-16
Release date:2000-03-01
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the higher Ca(2+)-activation of the regulated actin-activated myosin ATPase observed with Dictyostelium/Tetrahymena actin chimeras.
J.Mol.Biol., 296, 2000
1C0F
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CRYSTAL STRUCTURE OF DICTYOSTELIUM CAATP-ACTIN IN COMPLEX WITH GELSOLIN SEGMENT 1
Descriptor: ACTIN, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
Authors:Matsuura, Y, Stewart, M, Kawamoto, M, Kamiya, N, Saeki, K, Yasunaga, T, Wakabayashi, T.
Deposit date:1999-07-16
Release date:2000-03-01
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the higher Ca(2+)-activation of the regulated actin-activated myosin ATPase observed with Dictyostelium/Tetrahymena actin chimeras
J.Mol.Biol., 296, 2000
1DEJ
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CRYSTAL STRUCTURE OF A DICTYOSTELIUM/TETRAHYMENA CHIMERA ACTIN (MUTANT 646: Q228K/T229A/A230Y/A231K/S232E/E360H) IN COMPLEX WITH HUMAN GELSOLIN SEGMENT 1
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, CHIMERIC ACTIN, ...
Authors:Matsuura, Y, Stewart, M, Kawamoto, M, Kamiya, N, Saeki, K, Yasunaga, T, Wakabayashi, T.
Deposit date:1999-11-15
Release date:2000-03-01
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the higher Ca(2+)-activation of the regulated actin-activated myosin ATPase observed with Dictyostelium/Tetrahymena actin chimeras.
J.Mol.Biol., 296, 2000
1UN0
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Crystal Structure of Yeast Karyopherin (Importin) alpha in complex with a Nup2p N-terminal fragment
Descriptor: IMPORTIN ALPHA SUBUNIT, NUCLEOPORIN NUP2
Authors:Matsuura, Y, Lange, A, Harreman, M.T, Corbett, A.H, Stewart, M.
Deposit date:2003-09-03
Release date:2003-10-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for Nup2P Function in Cargo Release and Karyopherin Recycling in Nuclear Import
Embo J., 22, 2003
3AA9
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BU of 3aa9 by Molmil
Crystal Structure Analysis of the Mutant CutA1 (E61V) from E. coli
Descriptor: Divalent-cation tolerance protein cutA
Authors:Matsuura, Y, Tanaka, T, Bagautdinov, B, Kunishima, N, Yutani, K.
Deposit date:2009-11-12
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Remarkable improvement in the heat stability of CutA1 from Escherichia coli by rational protein design
J.Biochem., 148, 2010
3AA8
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Crystal Structure Analysis of the Mutant CutA1 (S11V/E61V) from E. coli
Descriptor: Divalent-cation tolerance protein cutA
Authors:Matsuura, Y, Tanaka, T, Bagautdinov, B, Kunishima, N, Yutani, K.
Deposit date:2009-11-12
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Remarkable improvement in the heat stability of CutA1 from Escherichia coli by rational protein design
J.Biochem., 148, 2010
351C
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STRUCTURE OF CYTOCHROME C551 FROM P. AERUGINOSA REFINED AT 1.6 ANGSTROMS RESOLUTION AND COMPARISON OF THE TWO REDOX FORMS
Descriptor: CYTOCHROME C551, PROTOPORPHYRIN IX CONTAINING FE
Authors:Matsuura, Y, Takano, T, Dickerson, R.E.
Deposit date:1981-07-20
Release date:1981-10-02
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of cytochrome c551 from Pseudomonas aeruginosa refined at 1.6 A resolution and comparison of the two redox forms.
J.Mol.Biol., 156, 1982
3AH6
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Remarkable improvement of the heat stability of CutA1 from E.coli by rational protein designing
Descriptor: Divalent-cation tolerance protein cutA
Authors:Matsuura, Y, Tanaka, T, Bagautdinov, B, Kunishima, N, Yutani, K.
Deposit date:2010-04-15
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Remarkable improvement in the heat stability of CutA1 from Escherichia coli by rational protein design
J.Biochem., 148, 2010
451C
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BU of 451c by Molmil
STRUCTURE OF CYTOCHROME C551 FROM P. AERUGINOSA REFINED AT 1.6 ANGSTROMS RESOLUTION AND COMPARISON OF THE TWO REDOX FORMS
Descriptor: CYTOCHROME C551, PROTOPORPHYRIN IX CONTAINING FE
Authors:Matsuura, Y, Takano, T, Dickerson, R.E.
Deposit date:1981-07-20
Release date:1981-10-02
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of cytochrome c551 from Pseudomonas aeruginosa refined at 1.6 A resolution and comparison of the two redox forms.
J.Mol.Biol., 156, 1982
2C1T
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BU of 2c1t by Molmil
Structure of the Kap60p:Nup2 complex
Descriptor: IMPORTIN ALPHA SUBUNIT, NUCLEOPORIN NUP2
Authors:Matsuura, Y, Stewart, M.
Deposit date:2005-09-20
Release date:2005-11-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Nup50/Npap60 Function in Nuclear Import Complex Disassembly and Importin Recycling
Embo J., 24, 2005
2C1M
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BU of 2c1m by Molmil
Nup50:importin-alpha complex
Descriptor: IMPORTIN-ALPHA2 SUBUNIT, NUCLEOPORIN 50 KDA
Authors:Matsuura, Y, Stewart, M.
Deposit date:2005-09-16
Release date:2005-11-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Nup50/Npap60 Function in Nuclear Protein Import Complex Disassembly and Importin Recycling.
Embo J., 24, 2005
1JDA
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BU of 1jda by Molmil
MALTOTETRAOSE-FORMING EXO-AMYLASE
Descriptor: 1,4-ALPHA MALTOTETRAHYDROLASE, CALCIUM ION
Authors:Yoshioka, Y, Hasegawa, K, Matsuura, Y, Katsube, Y, Kubota, M.
Deposit date:1997-06-16
Release date:1997-10-15
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of a mutant maltotetraose-forming exo-amylase cocrystallized with maltopentaose.
J.Mol.Biol., 271, 1997
4Y65
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BU of 4y65 by Molmil
Crystal structure of E.coli CutA1 C16A/C39A/C79A mutation
Descriptor: Divalent-cation tolerance protein CutA
Authors:Tanaka, T, Matsuura, Y, Yutani, K.
Deposit date:2015-02-12
Release date:2015-04-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of E.coli CutA1 C16A/C39A/C79A mutation
To Be Published
4Y6I
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BU of 4y6i by Molmil
Crystal structure of E.coli CutA1 E61V/C16A/C39A/C79A mutation
Descriptor: Divalent-cation tolerance protein CutA
Authors:Tanaka, T, Matsuura, Y, Yutani, K.
Deposit date:2015-02-13
Release date:2015-09-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of E.coli CutA1 E61V/C16A/C39A/C79A mutation
To Be Published
4ZDU
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BU of 4zdu by Molmil
Crystal structure of importin-alpha bound to a non-classical nuclear localization signal of the influenza A virus nucleoprotein
Descriptor: Importin subunit alpha-1, Peptide from Nucleoprotein
Authors:Nakada, R, Hirano, H, Matsuura, Y.
Deposit date:2015-04-19
Release date:2015-10-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of importin-alpha bound to a non-classical nuclear localization signal of the influenza A virus nucleoprotein
Sci Rep, 5, 2015
4ZJ7
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Crystal structure of the karyopherin Kap121p bound to the extreme C-terminus of the protein phosphatase Cdc14p
Descriptor: Importin subunit beta-3, Tyrosine-protein phosphatase CDC14
Authors:Kobayashi, J, Hirano, H, Matsuura, Y.
Deposit date:2015-04-29
Release date:2015-06-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the karyopherin Kap121p bound to the extreme C-terminus of the protein phosphatase Cdc14p
Biochem.Biophys.Res.Commun., 463, 2015
3M1I
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Crystal structure of yeast CRM1 (Xpo1p) in complex with yeast RanBP1 (Yrb1p) and yeast RanGTP (Gsp1pGTP)
Descriptor: Exportin-1, GTP-binding nuclear protein GSP1/CNR1, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Koyama, M, Matsuura, Y.
Deposit date:2010-03-05
Release date:2010-06-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:An allosteric mechanism to displace nuclear export cargo from CRM1 and RanGTP by RanBP1
Embo J., 29, 2010
5WR2
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Thermolysin, SFX liganded form with oil-based carrier
Descriptor: CALCIUM ION, N-[(benzyloxy)carbonyl]-L-aspartic acid, Thermolysin, ...
Authors:Kunishima, N, Naitow, H, Matsuura, Y.
Deposit date:2016-11-29
Release date:2017-08-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Protein-ligand complex structure from serial femtosecond crystallography using soaked thermolysin microcrystals and comparison with structures from synchrotron radiation
Acta Crystallogr D Struct Biol, 73, 2017
5WR4
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Thermolysin, SFX unliganded form with oil-based carrier
Descriptor: CALCIUM ION, Thermolysin, ZINC ION
Authors:Kunishima, N, Naitow, H, Matsuura, Y.
Deposit date:2016-11-29
Release date:2017-08-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Protein-ligand complex structure from serial femtosecond crystallography using soaked thermolysin microcrystals and comparison with structures from synchrotron radiation
Acta Crystallogr D Struct Biol, 73, 2017

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