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PDB: 840 results

6IB5
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Mutant of flavin-dependent tryptophan halogenase Thal with altered regioselectivity (Thal-RebH5)
Descriptor: GLYCEROL, PHOSPHATE ION, Tryptophan 6-halogenase
Authors:Moritzer, A, Prior, T, Niemann, H.H.
Deposit date:2018-11-29
Release date:2018-12-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Structure-based switch of regioselectivity in the flavin-dependent tryptophan 6-halogenase Thal.
J. Biol. Chem., 294, 2019
5XFC
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BU of 5xfc by Molmil
Serial femtosecond X-ray structure of a stem domain of human O-mannose beta-1,2-N-acetylglucosaminyltransferase solved by Se-SAD using XFEL (refined against 13,000 patterns)
Descriptor: 4-nitrophenyl beta-D-mannopyranoside, Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1
Authors:Kuwabara, N, Fumiaki, Y, Kato, R, Manya, H.
Deposit date:2017-04-10
Release date:2017-08-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Experimental phase determination with selenomethionine or mercury-derivatization in serial femtosecond crystallography
IUCrJ, 4, 2017
2J42
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low quality crystal structure of the transport component C2-II of the C2-toxin from Clostridium botulinum
Descriptor: C2 TOXIN COMPONENT-II
Authors:Schleberger, C, Hochmann, H, Barth, H, Aktories, K, Schulz, G.E.
Deposit date:2006-08-24
Release date:2006-10-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.13 Å)
Cite:Structure and Action of the Binary C2 Toxin from Clostridium Botulinum.
J.Mol.Biol., 364, 2006
2J3V
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BU of 2j3v by Molmil
Crystal structure of the enzymatic component C2-I of the C2-toxin from Clostridium botulinum at pH 3.0
Descriptor: C2 TOXIN COMPONENT I, GLYCEROL, SULFATE ION
Authors:Schleberger, C, Hochmann, H, Barth, H, Aktories, K, Schulz, G.E.
Deposit date:2006-08-23
Release date:2006-10-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structure and Action of the Binary C2 Toxin from Clostridium Botulinum.
J.Mol.Biol., 364, 2006
7ZVD
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BU of 7zvd by Molmil
K89 acetylated glucose-6-phosphate dehydrogenase (G6PD) in a complex with structural NADP+
Descriptor: Glucose-6-phosphate 1-dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Wu, F, Muskat, N.H, Nudelman, H, Shahar, A, Arbely, E.
Deposit date:2022-05-15
Release date:2023-08-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Acetylation-dependent coupling between G6PD activity and apoptotic signaling.
Nat Commun, 14, 2023
6N6D
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BU of 6n6d by Molmil
Vibrio cholerae Oligoribonuclease bound to pAG
Descriptor: Oligoribonuclease, RNA (5'-R(P*AP*G)-3'), SODIUM ION
Authors:Lormand, J.D, Sondermann, H.
Deposit date:2018-11-26
Release date:2019-06-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.534 Å)
Cite:A dedicated diribonucleotidase resolves a key bottleneck for the terminal step of RNA degradation.
Elife, 8, 2019
6N6K
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BU of 6n6k by Molmil
Human REXO2 bound to pAG
Descriptor: MALONATE ION, RNA (5'-R(P*AP*G)-3'), RNA exonuclease 2 homolog,Small fragment nuclease, ...
Authors:Lormand, J.D, Sondermann, H.
Deposit date:2018-11-26
Release date:2019-06-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.418 Å)
Cite:A dedicated diribonucleotidase resolves a key bottleneck for the terminal step of RNA degradation.
Elife, 8, 2019
6P9E
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BU of 6p9e by Molmil
Crystal structure of IL-36gamma complexed to A-552
Descriptor: (2S)-2-{[4-(3-amino-4-methylphenyl)-6-methylpyrimidin-2-yl]oxy}-3-methoxy-3,3-diphenylpropanoic acid, Interleukin-36 gamma
Authors:Argiriadi, M.A, Todorovic, T, Su, Z, Putman, B, Kakavas, S.J, Salte, K.M, McDonald, H.A, Wetter, J.B, Paulsboe, S.E, Sun, Q, Gerstein, C.E, Medina, L, Sielaff, B, Sadhukhan, R, Stockmann, H, Richardson, P.L, Qiu, W, Henry, R.F, Herold, J.M, Shotwell, J.B, McGaraughty, S.P, Honore, P, Gopalakrishnan, S.M, Sun, C.C, Scott, V.E.
Deposit date:2019-06-10
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Small Molecule IL-36 gamma Antagonist as a Novel Therapeutic Approach for Plaque Psoriasis.
Sci Rep, 9, 2019
1PLC
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BU of 1plc by Molmil
ACCURACY AND PRECISION IN PROTEIN CRYSTAL STRUCTURE ANALYSIS: RESTRAINED LEAST-SQUARES REFINEMENT OF THE CRYSTAL STRUCTURE OF POPLAR PLASTOCYANIN AT 1.33 ANGSTROMS RESOLUTION
Descriptor: COPPER (II) ION, PLASTOCYANIN
Authors:Guss, J.M, Freeman, H.C.
Deposit date:1992-03-11
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Accuracy and precision in protein structure analysis: restrained least-squares refinement of the structure of poplar plastocyanin at 1.33 A resolution.
Acta Crystallogr.,Sect.B, 48, 1992
2II0
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BU of 2ii0 by Molmil
Crystal Structure of catalytic domain of Son of sevenless (Rem-Cdc25) in the absence of Ras
Descriptor: Son of sevenless homolog 1
Authors:Freedman, T.S, Sondermann, H, Friedland, G.D, Kortemme, T, Bar-Sagi, D, Marqusee, S, Kuriyan, J.
Deposit date:2006-09-27
Release date:2006-10-31
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:A Ras-induced conformational switch in the Ras activator Son of sevenless.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2J3Z
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BU of 2j3z by Molmil
Crystal structure of the enzymatic component C2-I of the C2-toxin from Clostridium botulinum at pH 6.1
Descriptor: C2 TOXIN COMPONENT I, COBALT (II) ION, GLYCEROL, ...
Authors:Schleberger, C, Hochmann, H, Barth, H, Aktories, K, Schulz, G.E.
Deposit date:2006-08-23
Release date:2006-10-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and Action of the Binary C2 Toxin from Clostridium Botulinum.
J.Mol.Biol., 364, 2006
6N6J
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BU of 6n6j by Molmil
Human REXO2 bound to pAA
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, MALONATE ION, ...
Authors:Lormand, J.D, Sondermann, H.
Deposit date:2018-11-26
Release date:2019-06-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.317 Å)
Cite:A dedicated diribonucleotidase resolves a key bottleneck for the terminal step of RNA degradation.
Elife, 8, 2019
6N6F
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BU of 6n6f by Molmil
Vibrio cholerae Oligoribonuclease bound to pGC
Descriptor: Oligoribonuclease, RNA (5'-R(P*GP*C)-3'), SODIUM ION
Authors:Lormand, J.D, Sondermann, H.
Deposit date:2018-11-26
Release date:2019-06-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.735 Å)
Cite:A dedicated diribonucleotidase resolves a key bottleneck for the terminal step of RNA degradation.
Elife, 8, 2019
6N6C
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BU of 6n6c by Molmil
Vibrio cholerae Oligoribonuclease bound to pAA
Descriptor: RNA (5'-R(P*AP*A)-3'), RNA exonuclease 2 homolog,Small fragment nuclease, SODIUM ION
Authors:Lormand, J.D, Sondermann, H.
Deposit date:2018-11-26
Release date:2019-06-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.619 Å)
Cite:A dedicated diribonucleotidase resolves a key bottleneck for the terminal step of RNA degradation.
Elife, 8, 2019
6N6H
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BU of 6n6h by Molmil
Vibrio cholerae Oligoribonuclease bound to pCpU
Descriptor: Oligoribonuclease, RNA (5'-R(P*CP*U)-3'), SODIUM ION
Authors:Lormand, J.D, Sondermann, H.
Deposit date:2018-11-26
Release date:2019-06-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.757 Å)
Cite:A dedicated diribonucleotidase resolves a key bottleneck for the terminal step of RNA degradation.
Elife, 8, 2019
6N6I
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BU of 6n6i by Molmil
Human REXO2 bound to pGG
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, MALONATE ION, ...
Authors:Lormand, J.D, Sondermann, H.
Deposit date:2018-11-26
Release date:2019-06-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.431 Å)
Cite:A dedicated diribonucleotidase resolves a key bottleneck for the terminal step of RNA degradation.
Elife, 8, 2019
2J3X
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BU of 2j3x by Molmil
Crystal structure of the enzymatic component C2-I of the C2-toxin from Clostridium botulinum at pH 3.0 (mut-S361R)
Descriptor: C2 TOXIN COMPONENT I, GLYCEROL, SULFATE ION
Authors:Schleberger, C, Hochmann, H, Barth, H, Aktories, K, Schulz, G.E.
Deposit date:2006-08-23
Release date:2006-10-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure and Action of the Binary C2 Toxin from Clostridium Botulinum.
J.Mol.Biol., 364, 2006
7QPR
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BU of 7qpr by Molmil
Structure of full length SpoT
Descriptor: ACT domain protein, CHLORIDE ION, CITRATE ANION, ...
Authors:Garcia-Pino, A, Tamman, H.
Deposit date:2022-01-05
Release date:2023-01-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.513 Å)
Cite:Structure of full length SpoT
To Be Published
3RWT
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BU of 3rwt by Molmil
Crystal structure of circular permutated Red Fluorescent Protein mKate(cp 154-153)
Descriptor: Fluorescent protein FP480,Fluorescent protein FP480, MAGNESIUM ION
Authors:Wang, Q, Sondermann, H.
Deposit date:2011-05-09
Release date:2011-06-15
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Circular permutation of red fluorescent proteins.
Plos One, 6, 2011
1O3R
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BU of 1o3r by Molmil
PROTEIN-DNA RECOGNITION AND DNA DEFORMATION REVEALED IN CRYSTAL STRUCTURES OF CAP-DNA COMPLEXES
Descriptor: 5'-D(*AP*AP*AP*AP*AP*TP*GP*CP*GP*AP*T)-3', 5'-D(*CP*TP*AP*GP*AP*TP*CP*GP*CP*AP*TP*TP*TP*TP*T)-3', ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, ...
Authors:Chen, S, Vojtechovsky, J, Parkinson, G.N, Ebright, R.H, Berman, H.M.
Deposit date:2003-03-18
Release date:2003-04-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Indirect Readout of DNA Sequence at the Primary-kink Site in the CAP-DNA Complex: DNA Binding Specificity Based on Energetics of DNA Kinking
J.Mol.Biol., 314, 2001
1NEC
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BU of 1nec by Molmil
NITROREDUCTASE FROM ENTEROBACTER CLOACAE
Descriptor: FLAVIN MONONUCLEOTIDE, PROTEIN (NITROREDUCTASE)
Authors:Hecht, H.J, Bryant, C, Erdmann, H, Pelletier, H, Sawaya, R.
Deposit date:1999-03-30
Release date:2000-03-31
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of Nitroreductase from Enterobacter Cloacae
To be Published
7OFU
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BU of 7ofu by Molmil
Structure of SARS-CoV-2 Papain-like protease PLpro in complex with 3, 4-Dihydroxybenzoic acid, methyl ester
Descriptor: CHLORIDE ION, GLYCEROL, PHOSPHATE ION, ...
Authors:Srinivasan, V, Ewert, W, Werner, N, Falke, S, Guenther, S, Reinke, P, Sprenger, J, Brognaro, H, Ullah, N, Andaleeb, H, Perbandt, M, Alves Franca, B, Schwinzer, M, Wang, M, Wolf, M, Lieske, J, Koua, F, Ginn, H, Lane, T.J, Yefanov, O, Gelisio, L, Hakanpaeae, J, Saouane, S, Tolstikova, A, Groessler, M, Fleckenstein, H, Trost, F, Lorenzen, K, Schubert, R, Han, H, Schmidt, C, Brings, L, Galchenkova, M, Gevorkov, Y, Li, C, Perk, A, Awel, S, Wahab, A, Choudary, I, Turk, D, Hinrichs, W, Chapman, H.N, Meents, A, Betzel, C.
Deposit date:2021-05-05
Release date:2021-05-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Antiviral activity of natural phenolic compounds in complex at an allosteric site of SARS-CoV-2 papain-like protease.
Commun Biol, 5, 2022
7OFS
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BU of 7ofs by Molmil
Structure of SARS-CoV-2 Papain-like protease PLpro in complex with 4-(2-hydroxyethyl)phenol
Descriptor: 4-(2-hydroxyethyl)phenol, CHLORIDE ION, GLYCEROL, ...
Authors:Srinivasan, V, Werner, N, Falke, S, Guenther, S, Reinke, P, Ewert, W, Sprenger, J, Koua, F, Brognaro, H, Ullah, N, Andaleeb, H, Perbandt, M, Alves Franca, B, Schwinzer, M, Wang, M, Lieske, J, Ginn, H, Lane, T.J, Yefanov, O, Gelisio, L, Hakanpaeae, J, Saouane, S, Tolstikova, A, Groessler, M, Fleckenstein, H, Trost, F, Wolf, M, Lorenzen, K, Schubert, R, Han, H, Schmidt, C, Brings, L, Galchenkova, M, Gevorkov, Y, Li, C, Perk, A, Awel, S, Wahab, A, Choudary, I, Turk, D, Hinrichs, W, Chapman, H.N, Meents, A, Betzel, C.
Deposit date:2021-05-05
Release date:2021-05-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Antiviral activity of natural phenolic compounds in complex at an allosteric site of SARS-CoV-2 papain-like protease.
Commun Biol, 5, 2022
6HZO
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BU of 6hzo by Molmil
Apo structure of TP domain from Haemophilus influenzae Penicillin-Binding Protein 3
Descriptor: FtsI
Authors:Bellini, D, Koekemoer, L, Newman, H, Dowson, C.G.
Deposit date:2018-10-23
Release date:2019-11-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Novel and Improved Crystal Structures of H. influenzae, E. coli and P. aeruginosa Penicillin-Binding Protein 3 (PBP3) and N. gonorrhoeae PBP2: Toward a Better Understanding of beta-Lactam Target-Mediated Resistance.
J.Mol.Biol., 431, 2019
7OFT
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BU of 7oft by Molmil
Structure of SARS-CoV-2 Papain-like protease PLpro in complex with p-hydroxybenzaldehyde
Descriptor: CHLORIDE ION, P-HYDROXYBENZALDEHYDE, POTASSIUM ION, ...
Authors:Srinivasan, V, Werner, N, Falke, S, Guenther, S, Reinke, P, Brognaro, H, Ullah, N, Andaleeb, H, Perbandt, M, Alves Franca, B, Schwinzer, M, Wang, M, Ewert, W, Sprenger, J, Lieske, J, Koua, F, Ginn, H, Lane, T.J, Wolf, M, Yefanov, O, Gelisio, L, Saouane, S, Tolstikova, A, Groessler, M, Fleckenstein, H, Trost, F, Lorenzen, K, Schubert, R, Han, H, Schmidt, C, Brings, L, Galchenkova, M, Gevorkov, Y, Li, C, Perk, A, Awel, S, Wahab, A, Choudary, I, Turk, D, Hinrichs, W, Chapman, H.N, Meents, A, Betzel, C.
Deposit date:2021-05-05
Release date:2021-05-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Antiviral activity of natural phenolic compounds in complex at an allosteric site of SARS-CoV-2 papain-like protease.
Commun Biol, 5, 2022

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