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PDB: 1216 results

2UVM
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BU of 2uvm by Molmil
Structure of PKBalpha PH domain in complex with a novel inositol headgroup surrogate, benzene 1,2,3,4-tetrakisphosphate
Descriptor: BENZENE-1,2,3,4-TETRAYL TETRAKIS[DIHYDROGEN (PHOSPHATE)], RAC-ALPHA SERINE/THREONINE-PROTEIN KINASE, SODIUM ION
Authors:Komander, D, Mills, S.J, Trusselle, M.N, Safrany, S.T, van Aalten, D.M.F, Potter, B.V.L.
Deposit date:2007-03-12
Release date:2007-04-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Novel Inositol Phospholipid Headgroup Surrogate Crystallised in the Pleckstrin Homology Domain of Protein Kinase Balpha.
Acs Chem.Biol., 2, 2007
2VFJ
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BU of 2vfj by Molmil
Structure of the A20 Ovarian Tumour (OTU) domain
Descriptor: MAGNESIUM ION, SULFATE ION, TUMOR NECROSIS FACTOR
Authors:Komander, D, Barford, D.
Deposit date:2007-11-04
Release date:2007-12-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of the A20 Otu Domain and Mechanistic Insights Into Deubiquitination
Biochem.J., 409, 2008
4E8U
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BU of 4e8u by Molmil
Crystal structure of Arabidopsis IDN2 XS domain along with a small segment of adjacent coiled-coil region
Descriptor: Putative uncharacterized protein T8P19.180, SULFATE ION
Authors:Simanshu, D.K, Patel, D.J.
Deposit date:2012-03-20
Release date:2012-06-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:INVOLVED IN DE NOVO 2-containing complex involved in RNA-directed DNA methylation in Arabidopsis.
Proc.Natl.Acad.Sci.USA, 109, 2012
8QW7
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BU of 8qw7 by Molmil
Crystal Structure of compound 4 in complex with KRAS G12V C118S GDP and pVHL:ElonginC:ElonginB
Descriptor: (2S,4R)-1-[(2R)-2-[3-[4-[(3S)-4-[4-[5-[(4S)-2-azanyl-3-cyano-4-methyl-6,7-dihydro-5H-1-benzothiophen-4-yl]-1,2,4-oxadiazol-3-yl]pyrimidin-2-yl]-3-methyl-1,4-diazepan-1-yl]butoxy]-1,2-oxazol-5-yl]-3-methyl-butanoyl]-N-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Elongin-B, Elongin-C, ...
Authors:Zollman, D, Farnaby, W, Ciulli, A.
Deposit date:2023-10-18
Release date:2023-12-06
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Targeting cancer with small molecule pan-KRAS degraders
Science, 2024
8QW6
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BU of 8qw6 by Molmil
Crystal Structure of compound 3 in complex with KRAS G12V C118S GDP and pVHL:ElonginC:ElonginB
Descriptor: (2S,4R)-1-[(2S)-2-[6-[(3S)-4-[4-[5-[(4S)-2-azanyl-3-cyano-4-methyl-6,7-dihydro-5H-1-benzothiophen-4-yl]-1,2,4-oxadiazol-3-yl]pyrimidin-2-yl]-3-methyl-1,4-diazepan-1-yl]hexanoylamino]-3,3-dimethyl-butanoyl]-N-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Elongin-B, Elongin-C, ...
Authors:Zollman, D, Farnaby, W, Ciulli, A.
Deposit date:2023-10-18
Release date:2023-12-06
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Targeting cancer with small molecule pan-KRAS degraders
Science, 2024
7YYO
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BU of 7yyo by Molmil
Cryo-EM structure of an a-carboxysome RuBisCO enzyme at 2.9 A resolution
Descriptor: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase large chain, ...
Authors:Mann, D, Evans, S.L, Bergeron, J.R.C.
Deposit date:2022-02-18
Release date:2023-01-25
Last modified:2023-06-14
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:Single-particle cryo-EM analysis of the shell architecture and internal organization of an intact alpha-carboxysome.
Structure, 31, 2023
7YO3
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BU of 7yo3 by Molmil
Cryo-EM structure of human Slo1-LRRC26 complex with C4 symmetry
Descriptor: CALCIUM ION, Calcium-activated potassium channel subunit alpha-1, Leucine-rich repeat-containing protein 26, ...
Authors:Yamanouchi, D, Nureki, O.
Deposit date:2022-08-01
Release date:2023-08-30
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis for dual allosteric gating modulation of Slo1-LRRC channel complex
To Be Published
6NEF
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BU of 6nef by Molmil
Outer Membrane Cytochrome S Filament from Geobacter Sulfurreducens
Descriptor: C-type cytochrome OmcS, HEME C, MAGNESIUM ION
Authors:Filman, D.J, Marino, S.F, Ward, J.E, Yang, L, Mester, Z, Bullitt, E, Lovley, D.R, Strauss, M.
Deposit date:2018-12-17
Release date:2019-07-03
Last modified:2019-09-11
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Cryo-EM reveals the structural basis of long-range electron transport in a cytochrome-based bacterial nanowire.
Commun Biol, 2, 2019
5ETX
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BU of 5etx by Molmil
Crystal structure of HCV NS3/4A protease A156T variant in complex with 5172-Linear (MK-5172 linear analogue)
Descriptor: CHLORIDE ION, NS3 protease, ZINC ION, ...
Authors:Soumana, D, Yilmaz, N.K, Ali, A, Prachanronarong, K.L, Aydin, C, Schiffer, C.A.
Deposit date:2015-11-18
Release date:2016-01-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural and Thermodynamic Effects of Macrocyclization in HCV NS3/4A Inhibitor MK-5172.
Acs Chem.Biol., 11, 2016
7U8D
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BU of 7u8d by Molmil
FKBP12 mutant V55G bound to Rapa*-3Z
Descriptor: (3S,5Z,6R,7E,9R,10R,12R,14S,15E,17E,19E,21S,23S,26R,27R,30R,34aS)-5-(ethoxyimino)-9,27-dihydroxy-3-{(2R)-1-[(1S,3R,4R)-4-hydroxy-3-methoxycyclohexyl]propan-2-yl}-10,21-dimethoxy-6,8,12,14,20,26-hexamethyl-5,6,9,10,12,13,14,21,22,23,24,25,26,27,32,33,34,34a-octadecahydro-3H-23,27-epoxypyrido[2,1-c][1,4]oxazacyclohentriacontine-1,11,28,29(4H,31H)-tetrone, GLYCEROL, Peptidyl-prolyl cis-trans isomerase FKBP1A
Authors:Wassarman, D.R, Shokat, K.M.
Deposit date:2022-03-08
Release date:2022-09-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Tissue-restricted inhibition of mTOR using chemical genetics.
Proc.Natl.Acad.Sci.USA, 119, 2022
8QZE
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BU of 8qze by Molmil
Heme-domain BM3 variant 21B3_F87V-A328F
Descriptor: Bifunctional cytochrome P450/NADPH--P450 reductase, GLYCEROL, IMIDAZOLE, ...
Authors:Opperman, D.J, Ebrecht, A.C, Aschenbrenner, J.C.
Deposit date:2023-10-27
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Revisiting strategies and their combinatorial effect for introducing peroxygenase activity in CYP102A1 (P450BM3)
Mol Catal, 557, 2024
8QZF
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BU of 8qzf by Molmil
Heme-domain BM3 mutant T268E
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Bifunctional cytochrome P450/NADPH--P450 reductase, DI(HYDROXYETHYL)ETHER, ...
Authors:Opperman, D.J, Ebrecht, A.C, Aschenbrenner, J.C.
Deposit date:2023-10-27
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Revisiting strategies and their combinatorial effect for introducing peroxygenase activity in CYP102A1 (P450BM3)
Mol Catal, 557, 2024
5OCS
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BU of 5ocs by Molmil
Ene-reductase (ER/OYE) from Ralstonia (Cupriavidus) metallidurans
Descriptor: ACETATE ION, CITRIC ACID, FLAVIN MONONUCLEOTIDE, ...
Authors:Opperman, D.J.
Deposit date:2017-07-03
Release date:2017-09-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural investigation into the C-terminal extension of the ene-reductase from Ralstonia (Cupriavidus) metallidurans.
Proteins, 85, 2017
8Q5J
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BU of 8q5j by Molmil
Cytochrome P450 monooxygenase from Streptomyces scabiei (SscaCYP)
Descriptor: Cytochrome P450 107B1, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Opperman, D.J, Ebrecht, A.C.
Deposit date:2023-08-09
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Natural alternative heme-environments allow efficient peroxygenase activity by cytochrome P450 monooxygenases
Catalysis Science And Technology, 13, 2023
5OGT
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BU of 5ogt by Molmil
Thermus scotoductus SA-01 Ene-reductase triple mutant TsER_C25D_I67T_A102H
Descriptor: Chromate reductase, FLAVIN MONONUCLEOTIDE
Authors:Opperman, D.J, Hoebenreich, S, Nett, N.
Deposit date:2017-07-13
Release date:2018-08-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Thermus scotoductus SA-01 Ene-reductase triple mutant TsER_C25D_I67T_A102H
To Be Published
4GS4
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BU of 4gs4 by Molmil
Structure of the alpha-tubulin acetyltransferase, alpha-TAT1
Descriptor: ACETYL COENZYME *A, Alpha-tubulin N-acetyltransferase
Authors:Friedmann, D.R, Fan, J, Marmorstein, R.
Deposit date:2012-08-27
Release date:2012-10-17
Last modified:2013-08-28
Method:X-RAY DIFFRACTION (2.112 Å)
Cite:Structure of the alpha-tubulin acetyltransferase, alpha TAT1, and implications for tubulin-specific acetylation.
Proc.Natl.Acad.Sci.USA, 109, 2012
7M1W
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BU of 7m1w by Molmil
NMR structure of the Human T-cell leukemia virus 1 matrix protein
Descriptor: Matrix protein p19
Authors:Herrmann, D, Saad, J.S.
Deposit date:2021-03-15
Release date:2021-09-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Insights into the Mechanism of Human T-cell Leukemia Virus Type 1 Gag Targeting to the Plasma Membrane for Assembly.
J.Mol.Biol., 433, 2021
6FKO
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BU of 6fko by Molmil
Deoxyguanylosuccinate synthase (DgsS) quaternary structure with ATP, dGMP, hadacidin at 2.1 Angstrom resolution
Descriptor: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Adenylosuccinate synthetase, ...
Authors:Sleiman, D, Loc'h, J, Haouz, A, Kaminski, P.A.
Deposit date:2018-01-24
Release date:2019-06-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Deoxyguanylosuccinate synthase (DgsS) quaternary structure with ATP, dGMP, HAdacidin at 2.1 Angstrom resolution
To Be Published
6FM1
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BU of 6fm1 by Molmil
Deoxyguanylosuccinate synthase (DgsS) quaternary structure with ATPanddGMP at 2.3 Angstrom resolution
Descriptor: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Adenylosuccinate synthetase, ...
Authors:Sleiman, D, Loc'h, J, Haouz, A, Kaminski, P.A.
Deposit date:2018-01-29
Release date:2019-06-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A third purine biosynthetic pathway encoded by aminoadenine-based viral DNA genomes.
Science, 372, 2021
6FM3
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BU of 6fm3 by Molmil
Deoxyguanylosuccinate synthase (DgsS) structure with ADP at 1.9 Angstrom resolution
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylosuccinate synthetase, CHLORIDE ION
Authors:Sleiman, D, Loc'h, J, Haouz, A, Kaminski, P.A.
Deposit date:2018-01-30
Release date:2019-06-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Deoxyguanylosuccinate synthase (DgsS) quaternary structure with ATP0, dGMP, Magnesium at 2.3 Angstrom resolution
To Be Published
6FLF
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BU of 6flf by Molmil
Deoxyguanylosuccinate synthase (DgsS) structure at 1.33 Angstrom resolution.
Descriptor: Adenylosuccinate synthetase
Authors:Sleiman, D, Loc'h, J, Haouz, A, Kaminski, P.A.
Deposit date:2018-01-25
Release date:2019-06-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:A third purine biosynthetic pathway encoded by aminoadenine-based viral DNA genomes.
Science, 372, 2021
6FM0
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BU of 6fm0 by Molmil
Deoxyguanylosuccinate synthase (DgsS) and ATP structure at 1.7 Angstrom resolution
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Adenylosuccinate synthetase
Authors:Sleiman, D, Loc'h, J, Haouz, A, Kaminski, P.A.
Deposit date:2018-01-29
Release date:2019-06-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A third purine biosynthetic pathway encoded by aminoadenine-based viral DNA genomes.
Science, 372, 2021
4AGG
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BU of 4agg by Molmil
Structure of a tetrameric galectin from Cinachyrella sp. (Ball sponge)
Descriptor: CHLORIDE ION, GALECTIN
Authors:Freymann, D.M, Focia, P.J, Sakai, R, Swanson, G.T.
Deposit date:2012-01-27
Release date:2012-08-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Structure of a Tetrameric Galectin from Cinachyrella Sp. (Ball Sponge).
Acta Crystallogr.,Sect.D, 68, 2012
4AGR
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BU of 4agr by Molmil
Structure of a tetrameric galectin from Cinachyrella sp. (Ball sponge)
Descriptor: CHLORIDE ION, GALECTIN
Authors:Freymann, D.M, Focia, P.J, Sakai, R, Swanson, G.T.
Deposit date:2012-01-31
Release date:2012-08-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of a Tetrameric Galectin from Cinachyrella Sp. (Ball Sponge).
Acta Crystallogr.,Sect.D, 68, 2012
4AGV
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BU of 4agv by Molmil
Structure of a tetrameric galectin from Cinachyrella sp. (Ball sponge)
Descriptor: GALECTIN
Authors:Freymann, D.M, Focia, P.J, Sakai, R, Swanson, G.T.
Deposit date:2012-01-31
Release date:2012-08-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure of a Tetrameric Galectin from Cinachyrella Sp. (Ball Sponge).
Acta Crystallogr.,Sect.D, 68, 2012

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