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PDB: 70 件

3W45
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Crystal structure of RsbX in complex with cobalt in space group P1
分子名称: COBALT (II) ION, Phosphoserine phosphatase RsbX
著者Makino, M, Teh, A.H, Baba, S, Shimizu, N, Yamamoto, M, Kumasaka, T.
登録日2013-01-04
公開日2014-01-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of the RsbX phosphatase involved in the general stress response of Bacillus subtilis
Acta Crystallogr.,Sect.D, 71, 2015
1WVP
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Structure of chemically modified myoglobin with distal N-tetrazolyl-histidine E7(64)
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
著者Makino, M, Sugimoto, H, Kamiya, N, Shiro, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-12-23
公開日2005-01-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Heme environmental structure of a novel artificial myoglobin with a closed heme pocket: site-specific chemical modification producing distal N-tetrazolylhistidine E7 by cyanogen bromide and azide ion
J.Am.Chem.Soc., 113, 1991
2Z3U
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Crystal Structure of Chromopyrrolic Acid Bound Cytochrome P450 StaP (CYP245A1)
分子名称: 1,2-ETHANEDIOL, 3,4-DI-1H-INDOL-3-YL-1H-PYRROLE-2,5-DICARBOXYLIC ACID, Cytochrome P450, ...
著者Makino, M, Sugimoto, H, Shiro, Y, Asamizu, S, Onaka, H, Nagano, S.
登録日2007-06-06
公開日2007-07-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures and catalytic mechanism of cytochrome P450 StaP that produces the indolocarbazole skeleton
Proc.Natl.Acad.Sci.Usa, 104, 2007
2DC3
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BU of 2dc3 by Molmil
Crystal structure of human cytoglobin at 1.68 angstroms resolution
分子名称: ACETIC ACID, Cytoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Makino, M, Sugimoto, H, Sawai, H, Kawada, N, Yoshizato, K, Shiro, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-21
公開日2006-05-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献High-resolution structure of human cytoglobin: identification of extra N- and C-termini and a new dimerization mode.
Acta Crystallogr.,Sect.D, 62, 2006
3AG0
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Crystal structure of carbonmonoxy human cytoglobin
分子名称: CARBON MONOXIDE, Cytoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Makino, M, Sawai, H, Shiro, Y, Sugimoto, H.
登録日2010-03-17
公開日2011-02-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the carbon monoxide complex of human cytoglobin
Proteins, 79, 2011
4A1H
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Human myelin P2 protein, K45S mutant
分子名称: CHLORIDE ION, GLYCEROL, MYELIN P2 PROTEIN, ...
著者Lehtimaki, M, Kursula, P.
登録日2011-09-15
公開日2012-09-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.201 Å)
主引用文献Structure-Function Relationships in the Myelin Peripheral Membrane Protein P2
To be Published
4A8Z
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Human myelin P2 protein, K112Q mutant
分子名称: GLYCEROL, MYELIN P2 PROTEIN, PALMITIC ACID, ...
著者Lehtimaki, M, Ruskamo, S, Kursula, P.
登録日2011-11-22
公開日2012-12-05
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Structure-Function Relationships in the Myelin Peripheral Membrane Protein P2
To be Published
2Z3T
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BU of 2z3t by Molmil
Crystal Structure of Substrate Free Cytochrome P450 StaP (CYP245A1)
分子名称: 1,2-ETHANEDIOL, Cytochrome P450, IMIDAZOLE, ...
著者Makino, M, Sugimoto, H, Shiro, Y, Asamizu, S, Onaka, H, Nagano, S.
登録日2007-06-06
公開日2007-07-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures and catalytic mechanism of cytochrome P450 StaP that produces the indolocarbazole skeleton
Proc.Natl.Acad.Sci.Usa, 104, 2007
4A1Y
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Human myelin P2 protein, K65Q mutant
分子名称: CHLORIDE ION, MYELIN P2 PROTEIN, PALMITIC ACID
著者Lehtimaki, M, Kursula, P.
登録日2011-09-20
公開日2012-10-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structure-Function Relationships in the Myelin Peripheral Membrane Protein P2
To be Published
3A1L
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Crystal Structure of 11,11'-Dichlorochromopyrrolic Acid Bound Cytochrome P450 StaP (CYP245A1)
分子名称: 3,4-bis(7-chloro-1H-indol-3-yl)-1H-pyrrole-2,5-dicarboxylic acid, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
著者Makino, M, Sugimoto, H, Shiro, Y, Asamizu, S, Onaka, H, Nagano, S.
登録日2009-04-09
公開日2009-05-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Theoretical and experimental studies of the conversion of chromopyrrolic acid to an antitumor derivative by cytochrome P450 StaP: the catalytic role of water molecules
J.Am.Chem.Soc., 131, 2009
1ALV
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CALCIUM BOUND DOMAIN VI OF PORCINE CALPAIN
分子名称: CALCIUM ION, CALPAIN
著者Narayana, S.V.L, Lin, G, Chattopadhyay, D, Maki, M.
登録日1997-06-03
公開日1998-06-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of calcium bound domain VI of calpain at 1.9 A resolution and its role in enzyme assembly, regulation, and inhibitor binding.
Nat.Struct.Biol., 4, 1997
3WXA
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X-ray crystal structural analysis of the complex between ALG-2 and Sec31A peptide
分子名称: Programmed cell death protein 6, Protein transport protein Sec31A, ZINC ION
著者Takahashi, T, Suzuki, H, Kawasaki, M, Shibata, H, Wakatsuki, S, Maki, M.
登録日2014-07-29
公開日2015-03-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Structural Analysis of the Complex between Penta-EF-Hand ALG-2 Protein and Sec31A Peptide Reveals a Novel Target Recognition Mechanism of ALG-2
Int J Mol Sci, 16, 2015
1NX2
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Calpain Domain VI
分子名称: CALCIUM ION, Calcium-dependent protease, small subunit
著者Todd, B, Moore, D, Deivanayagam, C.C.S, Lin, G.-D, Chattopadhyay, D, Maki, M, Wang, K.K.W, Narayana, S.V.L.
登録日2003-02-07
公開日2003-08-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A structural model for the inhibition of calpain by calpastatin: crystal structures of the native domain VI of calpain and its complexes with calpastatin peptide and a small molecule inhibitor.
J.Mol.Biol., 328, 2003
1NX1
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Calpain Domain VI Complexed with Calpastatin Inhibitory Domain C (DIC)
分子名称: CALCIUM ION, Calcium-dependent protease, small subunit, ...
著者Todd, B, Moore, D, Deivanayagam, C.C.S, Lin, G.-D, Chattopadhyay, D, Maki, M, Wang, K.K.W, Narayana, S.V.L.
登録日2003-02-07
公開日2003-08-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A structural model for the inhibition of calpain by calpastatin: crystal structures of the native domain VI of calpain and its complexes with calpastatin peptide and a small molecule inhibitor.
J.Mol.Biol., 328, 2003
1NX3
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Calpain Domain VI in Complex with the Inhibitor PD150606
分子名称: 3-(4-IODO-PHENYL)-2-MERCAPTO-PROPIONIC ACID, CALCIUM ION, Calcium-dependent protease, ...
著者Todd, B, Moore, D, Deivanayagam, C.C.S, Lin, G.-D, Chattopadhyay, D, Maki, M, Wang, K.K.W, Narayana, S.V.L.
登録日2003-02-07
公開日2003-08-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献A structural model for the inhibition of calpain by calpastatin: crystal structures of the native domain VI of calpain and its complexes with calpastatin peptide and a small molecule inhibitor.
J.Mol.Biol., 328, 2003
1NX0
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Structure of Calpain Domain 6 in Complex with Calpastatin DIC
分子名称: CALCIUM ION, Calcium-dependent protease, small subunit, ...
著者Todd, B, Moore, D, Deivanayagam, C.C.S, Lin, G.-D, Chattopadhyay, D, Maki, M, Wang, K.K.W, Narayana, S.V.L.
登録日2003-02-07
公開日2003-08-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A structural model for the inhibition of calpain by calpastatin: crystal structures of the native domain VI of calpain and its complexes with calpastatin peptide and a small molecule inhibitor.
J.Mol.Biol., 328, 2003
2ZNE
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BU of 2zne by Molmil
Crystal structure of Zn2+-bound form of des3-23ALG-2 complexed with Alix ABS peptide
分子名称: 16-meric peptide from Programmed cell death 6-interacting protein, Programmed cell death protein 6, SODIUM ION, ...
著者Suzuki, H, Kawasaki, M, Inuzuka, T, Kakiuchi, T, Shibata, H, Wakatsuki, S, Maki, M.
登録日2008-04-22
公開日2008-09-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Basis for Ca(2+)-Dependent Formation of ALG-2/Alix Peptide Complex: Ca(2+)/EF3-Driven Arginine Switch Mechanism
Structure, 16, 2008
2ZN8
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Crystal structure of Zn2+-bound form of ALG-2
分子名称: Programmed cell death protein 6, SODIUM ION, ZINC ION
著者Suzuki, H, Kawasaki, M, Inuzuka, T, Kakiuchi, T, Shibata, H, Wakatsuki, S, Maki, M.
登録日2008-04-22
公開日2008-09-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural Basis for Ca(2+)-Dependent Formation of ALG-2/Alix Peptide Complex: Ca(2+)/EF3-Driven Arginine Switch Mechanism
Structure, 16, 2008
2ZND
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BU of 2znd by Molmil
Crystal structure of Ca2+-free form of des3-20ALG-2
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, PHOSPHATE ION, Programmed cell death protein 6, ...
著者Suzuki, H, Kawasaki, M, Inuzuka, T, Kakiuchi, T, Shibata, H, Wakatsuki, S, Maki, M.
登録日2008-04-22
公開日2008-09-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural Basis for Ca(2+)-Dependent Formation of ALG-2/Alix Peptide Complex: Ca(2+)/EF3-Driven Arginine Switch Mechanism
Structure, 16, 2008
2ZN9
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Crystal structure of Ca2+-bound form of des3-20ALG-2
分子名称: CALCIUM ION, DODECAETHYLENE GLYCOL, NONAETHYLENE GLYCOL, ...
著者Suzuki, H, Kawasaki, M, Inuzuka, T, Kakiuchi, T, Shibata, H, Wakatsuki, S, Maki, M.
登録日2008-04-22
公開日2008-09-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Basis for Ca(2+)-Dependent Formation of ALG-2/Alix Peptide Complex: Ca(2+)/EF3-Driven Arginine Switch Mechanism
Structure, 16, 2008
3AAK
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BU of 3aak by Molmil
Crystal structure of Zn2+-bound form of des3-20ALG-2F122A
分子名称: Programmed cell death protein 6, ZINC ION
著者Inuzuka, T, Suzuki, H, Kawasaki, M, Shibata, H, Wakatsuki, S, Maki, M.
登録日2009-11-19
公開日2010-09-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Molecular basis for defect in Alix-binding by alternatively spliced isoform of ALG-2 (ALG-2DeltaGF122) and structural roles of F122 in target recognition
Bmc Struct.Biol., 10, 2010
2ZRT
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Crystal structure of Zn2+-bound form of des3-23ALG-2
分子名称: Programmed cell death protein 6, ZINC ION
著者Suzuki, H, Kawasaki, M, Kakiuchi, T, Shibata, H, Wakatsuki, S, Maki, M.
登録日2008-09-01
公開日2008-11-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystallization and X-ray diffraction analysis of N-terminally truncated human ALG-2
ACTA CRYSTALLOGR.,SECT.F, 64, 2008
2ZRS
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Crystal structure of Ca2+-bound form of des3-23ALG-2
分子名称: CALCIUM ION, Programmed cell death protein 6
著者Suzuki, H, Kawasaki, M, Kakiuchi, T, Shibata, H, Wakatsuki, S, Maki, M.
登録日2008-09-01
公開日2008-11-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystallization and X-ray diffraction analysis of N-terminally truncated human ALG-2
ACTA CRYSTALLOGR.,SECT.F, 64, 2008
3AAJ
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BU of 3aaj by Molmil
Crystal structure of Ca2+-bound form of des3-23ALG-2deltaGF122
分子名称: CALCIUM ION, Programmed cell death protein 6
著者Suzuki, H, Inuzuka, T, Kawasaki, M, Shibata, H, Wakatsuki, S, Maki, M.
登録日2009-11-19
公開日2010-09-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular basis for defect in Alix-binding by alternatively spliced isoform of ALG-2 (ALG-2DeltaGF122) and structural roles of F122 in target recognition
Bmc Struct.Biol., 10, 2010
3VTC
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Crystal structure of rat vitamin D receptor bound to a partial agonist 26-adamantyl-23-yne-19-norvitammin D ADTK3
分子名称: (1R,3R,7E,17beta)-17-{(2R,6R)-6-hydroxy-7-[(3S,5S,7S)-tricyclo[3.3.1.1~3,7~]dec-1-yl]hept-4-yn-2-yl}-2-methylidene-9,10-secoestra-5,7-diene-1,3-diol, 1,2-ETHANEDIOL, COACTIVATOR PEPTIDE DRIP, ...
著者Nakabayashi, M, Kudo, T, Tokiwa, H, Makishima, M, Yamada, S, Ikura, T, Ito, N.
登録日2012-05-26
公開日2013-06-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Combination of Triple Bond and Adamantane Ring on the Vitamin D Side Chain Produced Partial Agonists for Vitamin D Receptor.
J.Med.Chem., 2014

 

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