Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 261 results

3MKZ
DownloadVisualize
BU of 3mkz by Molmil
Structure of SopB(155-272)-18mer complex, P21 form
Descriptor: CALCIUM ION, DNA (5'-D(*CP*TP*GP*GP*GP*AP*CP*CP*AP*TP*GP*GP*TP*CP*CP*CP*AP*G)-3'), Protein sopB
Authors:Schumacher, M.A.
Deposit date:2010-04-15
Release date:2010-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Insight into F plasmid DNA segregation revealed by structures of SopB and SopB-DNA complexes.
Nucleic Acids Res., 38, 2010
3M8F
DownloadVisualize
BU of 3m8f by Molmil
Protein structure of type III plasmid segregation TubR mutant
Descriptor: Putative DNA-binding protein
Authors:Schumacher, M.A, Ni, L.
Deposit date:2010-03-17
Release date:2010-07-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:From the Cover: Plasmid protein TubR uses a distinct mode of HTH-DNA binding and recruits the prokaryotic tubulin homolog TubZ to effect DNA partition.
Proc.Natl.Acad.Sci.USA, 107, 2010
2Q2K
DownloadVisualize
BU of 2q2k by Molmil
Structure of nucleic-acid binding protein
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DNA (5'-D(*AP*GP*TP*AP*TP*AP*(5IU)P*AP*CP*(5IU)P*AP*GP*TP*AP*TP*AP*TP*AP*CP*T)-3'), Hypothetical protein
Authors:Schumacher, M.A, Glover, T, Firth, N.
Deposit date:2007-05-28
Release date:2008-02-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Segrosome structure revealed by a complex of ParR with centromere DNA.
Nature, 450, 2007
3OQN
DownloadVisualize
BU of 3oqn by Molmil
Structure of ccpa-hpr-ser46-p-gntr-down cre
Descriptor: 5'-D(*AP*TP*GP*GP*TP*AP*CP*CP*GP*CP*TP*TP*TP*CP*AP*A)-3', 5'-D(*TP*TP*GP*AP*AP*AP*GP*CP*GP*GP*TP*AP*CP*CP*AP*T)-3', Catabolite control protein A, ...
Authors:Schumacher, M.A, Sprehe, M, Bartholomae, M, Hillen, W, Brennan, R.G.
Deposit date:2010-09-03
Release date:2010-12-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structures of carbon catabolite protein A-(HPr-Ser46-P) bound to diverse catabolite response element sites reveal the basis for high-affinity binding to degenerate DNA operators.
Nucleic Acids Res., 39, 2011
3MKW
DownloadVisualize
BU of 3mkw by Molmil
Structure of sopB(155-272)-18mer complex, I23 form
Descriptor: DNA (5'-D(*CP*TP*GP*GP*GP*AP*CP*CP*AP*TP*GP*GP*TP*CP*CP*CP*AP*G)-3'), Protein sopB, SULFATE ION
Authors:Schumacher, M.A, Piro, K, Xu, W.
Deposit date:2010-04-15
Release date:2010-05-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Insight into F plasmid DNA segregation revealed by structures of SopB and SopB-DNA complexes.
Nucleic Acids Res., 38, 2010
3OQO
DownloadVisualize
BU of 3oqo by Molmil
Ccpa-hpr-ser46p-syn cre
Descriptor: 5'-D(*CP*TP*GP*AP*AP*AP*GP*CP*GP*CP*TP*AP*AP*CP*AP*G)-3', 5'-D(*CP*TP*GP*TP*TP*AP*GP*CP*GP*CP*TP*TP*TP*CP*AP*G)-3', Catabolite control protein A, ...
Authors:schumacher, M.A, Sprehe, M, Bartholomae, M, Hillen, W, Brennan, R.G.
Deposit date:2010-09-03
Release date:2011-10-26
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:Structures of carbon catabolite protein A-(HPr-Ser46-P) bound to diverse catabolite response element sites reveal the basis for high-affinity binding to degenerate DNA operators.
Nucleic Acids Res., 39, 2011
3M9A
DownloadVisualize
BU of 3m9a by Molmil
Protein structure of type III plasmid segregation TubR
Descriptor: Putative DNA-binding protein
Authors:Schumacher, M.A, Ni, L.
Deposit date:2010-03-21
Release date:2010-07-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:From the Cover: Plasmid protein TubR uses a distinct mode of HTH-DNA binding and recruits the prokaryotic tubulin homolog TubZ to effect DNA partition.
Proc.Natl.Acad.Sci.USA, 107, 2010
3MKY
DownloadVisualize
BU of 3mky by Molmil
Structure of SopB(155-323)-18mer DNA complex, I23 form
Descriptor: DNA (5'-D(*CP*TP*GP*GP*GP*AP*CP*CP*AP*TP*GP*GP*TP*CP*CP*CP*AP*G)-3'), Protein sopB, SULFATE ION
Authors:Schumacher, M.A, Piro, K, Xu, W.
Deposit date:2010-04-15
Release date:2010-05-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Insight into F plasmid DNA segregation revealed by structures of SopB and SopB-DNA complexes.
Nucleic Acids Res., 38, 2010
4YG1
DownloadVisualize
BU of 4yg1 by Molmil
HipB-O1-O2 complex/P21212 crystal form
Descriptor: Antitoxin HipB, DNA (48-MER)
Authors:Schumacher, M.A.
Deposit date:2015-02-25
Release date:2015-07-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:HipBA-promoter structures reveal the basis of heritable multidrug tolerance.
Nature, 524, 2015
3BT9
DownloadVisualize
BU of 3bt9 by Molmil
crystal structure of QacR(E57Q) bound to Dequalinium
Descriptor: DEQUALINIUM, HTH-type transcriptional regulator qacR, SULFATE ION
Authors:Shumacher, M.A, Schuman, J.T, Brennan, R.G.
Deposit date:2007-12-28
Release date:2008-08-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:QacR-cation recognition is mediated by a redundancy of residues capable of charge neutralization
Biochemistry, 47, 2008
5J6E
DownloadVisualize
BU of 5j6e by Molmil
Structure of disulfide crosslinked A. fumigatus FKBP12(V91C)
Descriptor: FK506-binding protein 1A
Authors:Schumacher, M.
Deposit date:2016-04-04
Release date:2016-09-14
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structures of Pathogenic Fungal FKBP12s Reveal Possible Self-Catalysis Function.
Mbio, 7, 2016
3DNU
DownloadVisualize
BU of 3dnu by Molmil
structure of MDT protein
Descriptor: CHLORIDE ION, PHOSPHATE ION, Protein hipA
Authors:schumacher, M.A.
Deposit date:2008-07-02
Release date:2009-01-27
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Molecular mechanisms of HipA-mediated multidrug tolerance and its neutralization by HipB.
Science, 323, 2009
4R4E
DownloadVisualize
BU of 4r4e by Molmil
Structure of GlnR-DNA complex
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, DNA (5'-D(*AP*TP*TP*CP*TP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*AP*GP*TP*A)-3'), ...
Authors:Schumacher, M.A.
Deposit date:2014-08-19
Release date:2015-03-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
4R22
DownloadVisualize
BU of 4r22 by Molmil
TnrA-DNA complex
Descriptor: DNA (5'-D(*CP*GP*TP*GP*TP*AP*AP*GP*GP*AP*AP*TP*TP*CP*TP*GP*AP*CP*AP*CP*G)-3'), HTH-type transcriptional regulator TnrA
Authors:Schumacher, M.A.
Deposit date:2014-08-08
Release date:2015-03-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
4R24
DownloadVisualize
BU of 4r24 by Molmil
Complete dissection of B. subtilis nitrogen homeostatic circuitry
Descriptor: DNA (5'-D(*CP*GP*TP*GP*TP*AP*AP*GP*GP*AP*AP*TP*TP*CP*TP*GP*AP*CP*AP*CP*G)-3'), HTH-type transcriptional regulator TnrA
Authors:Schumacher, M.A.
Deposit date:2014-08-08
Release date:2015-03-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
4R25
DownloadVisualize
BU of 4r25 by Molmil
Structure of B. subtilis GlnK
Descriptor: Nitrogen regulatory PII-like protein, ZINC ION
Authors:Schumacher, M.A.
Deposit date:2014-08-08
Release date:2015-03-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5193 Å)
Cite:Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
4RX6
DownloadVisualize
BU of 4rx6 by Molmil
Structure of B. subtilis GlnK-ATP complex to 2.6 Angstrom
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Nitrogen regulatory PII-like protein
Authors:Schumacher, M.A, Cuthbert, B, Tonthat, N, Chinnam, N.G, Whitfill, T.
Deposit date:2014-12-09
Release date:2015-12-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5994 Å)
Cite:Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis.
Genes Dev., 29, 2015
5HTG
DownloadVisualize
BU of 5htg by Molmil
Structure of apo P1 form of Candida albicans FKBP12
Descriptor: FK506-binding protein 1
Authors:Schumacher, M.A.
Deposit date:2016-01-26
Release date:2016-09-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of Pathogenic Fungal FKBP12s Reveal Possible Self-Catalysis Function.
Mbio, 7, 2016
4E03
DownloadVisualize
BU of 4e03 by Molmil
Structure of ParF-ADP form 2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Plasmid partitioning protein ParF
Authors:Schumacher, M.A, Ye, Q, Barge, M.R, Barilla, D, Hayes, F.
Deposit date:2012-03-02
Release date:2012-06-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural Mechanism of ATP-induced Polymerization of the Partition Factor ParF: IMPLICATIONS FOR DNA SEGREGATION.
J.Biol.Chem., 287, 2012
3PM1
DownloadVisualize
BU of 3pm1 by Molmil
Structure of QacR E90Q bound to Ethidium
Descriptor: ETHIDIUM, HTH-type transcriptional regulator qacR, SULFATE ION
Authors:Schumacher, M.A.
Deposit date:2010-11-15
Release date:2011-07-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A single acidic residue can guide binding site selection but does not govern QacR cationic-drug affinity.
Plos One, 6, 2011
3VEA
DownloadVisualize
BU of 3vea by Molmil
Crystal Structure of matP-matS23mer
Descriptor: 5'-D(*AP*GP*TP*TP*CP*GP*TP*GP*AP*CP*AP*AP*TP*GP*TP*CP*AP*CP*GP*AP*AP*CP*T)-3', 5'-D(*AP*GP*TP*TP*CP*GP*TP*GP*AP*CP*AP*TP*TP*GP*TP*CP*AP*CP*GP*AP*AP*CP*T)-3', Macrodomain Ter protein
Authors:Schumacher, M.A.
Deposit date:2012-01-07
Release date:2012-11-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Molecular basis for a protein-mediated DNA-bridging mechanism that functions in condensation of the E. coli chromosome.
Mol.Cell, 48, 2012
3JS6
DownloadVisualize
BU of 3js6 by Molmil
Crystal structure of apo psk41 parM protein
Descriptor: Uncharacterized ParM protein
Authors:Schumacher, M.A, Xu, W, Firth, N.
Deposit date:2009-09-09
Release date:2010-01-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure and filament dynamics of the pSK41 actin-like ParM protein: implications for plasmid DNA segregation.
J.Biol.Chem., 285, 2010
3DNT
DownloadVisualize
BU of 3dnt by Molmil
structures of MDT proteins
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Protein hipA, ...
Authors:Schumacher, M.A.
Deposit date:2008-07-02
Release date:2009-01-27
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Molecular mechanisms of HipA-mediated multidrug tolerance and its neutralization by HipB.
Science, 323, 2009
3DNV
DownloadVisualize
BU of 3dnv by Molmil
MDT Protein
Descriptor: DNA (5'-D(*DAP*DCP*DTP*DAP*DTP*DCP*DCP*DCP*DCP*DTP*DTP*DAP*DAP*DGP*DGP*DGP*DGP*DAP*DTP*DAP*DG)-3'), HTH-type transcriptional regulator hipB, Protein hipA, ...
Authors:schumacher, M.A.
Deposit date:2008-07-02
Release date:2009-01-27
Last modified:2023-04-05
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Molecular mechanisms of HipA-mediated multidrug tolerance and its neutralization by HipB.
Science, 323, 2009
5I41
DownloadVisualize
BU of 5i41 by Molmil
Structure of the apo RacA DNA binding domain
Descriptor: Chromosome-anchoring protein RacA
Authors:schumacher, M.A.
Deposit date:2016-02-11
Release date:2016-05-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular insights into DNA binding and anchoring by the Bacillus subtilis sporulation kinetochore-like RacA protein.
Nucleic Acids Res., 44, 2016

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon