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PDB: 52230 results

4UZZ
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Crystal structure of the TtIFT52-46 complex
Descriptor: INTRAFLAGELLAR TRANSPORT COMPLEX B PROTEIN 46 CARBOXY-TERMINAL PROTEIN, INTRAFLAGELLAR TRANSPORTER-LIKE PROTEIN
Authors:Braeuer, P, Taschner, M, Lorentzen, E.
Deposit date:2014-09-09
Release date:2014-11-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.318 Å)
Cite:Crystal Structures of Ift70/52 and Ift52/46 Provide Insight Into Intraflagellar Transport B Core Complex Assembly.
J.Cell Biol., 207, 2014
5KA7
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BU of 5ka7 by Molmil
Protein Tyrosine Phosphatase 1B T178A mutant in complex with TCS401, closed state
Descriptor: 2-(OXALYL-AMINO)-4,5,6,7-TETRAHYDRO-THIENO[2,3-C]PYRIDINE-3-CARBOXYLIC ACID, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
Authors:Choy, M.S, Peti, W, Page, R.
Deposit date:2016-06-01
Release date:2017-03-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.061 Å)
Cite:Conformational Rigidity and Protein Dynamics at Distinct Timescales Regulate PTP1B Activity and Allostery.
Mol. Cell, 65, 2017
7OFG
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BU of 7ofg by Molmil
Oxytocin NMR solution structure
Descriptor: Oxytocin
Authors:Shalev, D.E, Alshanski, I, Yitzchaik, S, Hurevich, M.
Deposit date:2021-05-04
Release date:2021-10-13
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Determining the structure and binding mechanism of oxytocin-Cu 2+ complex using paramagnetic relaxation enhancement NMR analysis.
J.Biol.Inorg.Chem., 26, 2021
4UZ2
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BU of 4uz2 by Molmil
Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus
Descriptor: CELL WALL-BINDING ENDOPEPTIDASE-RELATED PROTEIN
Authors:Wong, J.E.M.M, Blaise, M.
Deposit date:2014-09-04
Release date:2015-01-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:An Intermolecular Binding Mechanism Involving Multiple Lysm Domains Mediates Carbohydrate Recognition by an Endopeptidase.
Acta Crystallogr.,Sect.D, 71, 2015
4URU
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The crystal structure of H-Ras and SOS in complex with ligands
Descriptor: 4-METHOXY-N-(1,3-THIAZOL-2-YL)BENZENESULFONAMIDE, GTPASE HRAS, SON OF SEVENLESS HOMOLOG 1
Authors:Winter, J.J.G, Anderson, M, Blades, K, Brassington, C, Breeze, A.L, Chresta, C, Embrey, K, Fairley, G, Faulder, P, Finlay, M.R.V, Kettle, J.G, Nowak, T, Overman, R, Patel, S.J, Perkins, P, Spadola, L, Tart, J, Tucker, J, Wrigley, G.
Deposit date:2014-07-02
Release date:2015-03-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Small Molecule Binding Sites on the Ras:SOS Complex Can be Exploited for Inhibition of Ras Activation.
J.Med.Chem., 58, 2015
4UQU
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BU of 4uqu by Molmil
Crystal structure of the tetrachloroethene reductive dehalogenase from Sulfurospirillum multivorans
Descriptor: BENZAMIDINE, GLYCEROL, IRON/SULFUR CLUSTER, ...
Authors:Bommer, M, Kunze, C, Fesseler, J, Schubert, T, Diekert, G, Dobbek, H.
Deposit date:2014-06-25
Release date:2014-10-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.595 Å)
Cite:Structural Basis for Organohalide Respiration.
Science, 346, 2014
5KA0
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BU of 5ka0 by Molmil
Protein Tyrosine Phosphatase 1B Delta helix 7, open state
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Choy, M.S, Peti, W, Page, R.
Deposit date:2016-06-01
Release date:2017-03-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.991 Å)
Cite:Conformational Rigidity and Protein Dynamics at Distinct Timescales Regulate PTP1B Activity and Allostery.
Mol. Cell, 65, 2017
4V3L
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RNF38-UB-UbcH5B-Ub complex
Descriptor: 1,2-ETHANEDIOL, E3 UBIQUITIN-PROTEIN LIGASE RNF38, POLYUBIQUITIN-C, ...
Authors:Buetow, L, Gabrielsen, M, Anthony, N.G, Dou, H, Patel, A, Aitkenhead, H, Sibbet, G.J, Smith, B.O, Huang, D.T.
Deposit date:2014-10-20
Release date:2015-04-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Activation of a Primed Ring E3-E2-Ubiquitin Complex by Non-Covalent Ubiquitin.
Mol.Cell, 58, 2015
5KAD
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Protein Tyrosine Phosphatase 1B N193A mutant in complex with TCS401, closed state
Descriptor: 2-(OXALYL-AMINO)-4,5,6,7-TETRAHYDRO-THIENO[2,3-C]PYRIDINE-3-CARBOXYLIC ACID, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
Authors:Choy, M.S, Peti, W, Page, R.
Deposit date:2016-06-01
Release date:2017-03-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Conformational Rigidity and Protein Dynamics at Distinct Timescales Regulate PTP1B Activity and Allostery.
Mol. Cell, 65, 2017
4UTG
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Burkholderia pseudomallei heptokinase WcbL,AMPPNP (ATP analogue) complex.
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Vivoli, M, Isupov, M.N, Nicholas, R, Hill, A, Scott, A, Kosma, P, Prior, J, Harmer, N.J.
Deposit date:2014-07-21
Release date:2016-01-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Unraveling the B.Pseudomallei Heptokinase Wcbl: From Structure to Drug Discovery.
Chem.Biol., 22, 2015
8HJD
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BU of 8hjd by Molmil
Solution structure of cysteine-rich peptide Bidentatide (Achyranthes bidentata peptide) with glycation
Descriptor: Gly-bidentatide, beta-D-fructopyranose
Authors:Feng, Y, He, M, Zhang, X.
Deposit date:2022-11-23
Release date:2022-12-07
Method:SOLUTION NMR
Cite:Discovery of a cysteine-rich peptide with glycation modification from Achyranthes bidentata Blume.
Fitoterapia, 163, 2022
4UVV
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BU of 4uvv by Molmil
Crystal structure of human tankyrase 2 in complex with 3-(4- chlorophenyl)-5-methyl-1,2-dihydroisoquinolin-1-one
Descriptor: 3-(4-chlorophenyl)-5-methylisoquinolin-1(2H)-one, GLYCEROL, SULFATE ION, ...
Authors:Haikarainen, T, Narwal, M, Lehtio, L.
Deposit date:2014-08-08
Release date:2015-07-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Exploration of the Nicotinamide-Binding Site of the Tankyrases, Identifying 3-Arylisoquinolin-1-Ones as Potent and Selective Inhibitors in Vitro.
Bioorg.Med.Chem., 23, 2015
4UZX
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BU of 4uzx by Molmil
High-resolution NMR structures of the domains of Saccharomyces cerevisiae Tho1
Descriptor: PROTEIN THO1
Authors:Jacobsen, J.O.B, Allen, M.D, Freund, S.M.V, Bycroft, M.
Deposit date:2014-09-09
Release date:2014-12-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:High-Resolution NMR Structures of the Domains of Saccharomyces Cerevisiae Tho1.
Acta Crystallogr.,Sect.F, 72, 2016
8HJC
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Solution structure of cysteine-rich peptide Bidentatide (Achyranthes bidentata peptide)
Descriptor: Bidentatide
Authors:Feng, Y, He, M, Zhang, X.
Deposit date:2022-11-23
Release date:2022-12-07
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:Discovery of a cysteine-rich peptide with glycation modification from Achyranthes bidentata Blume.
Fitoterapia, 163, 2022
4UYR
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BU of 4uyr by Molmil
X-ray structure of the N-terminal domain of the flocculin Flo11 from Saccharomyces cerevisiae
Descriptor: FLOCCULATION PROTEIN FLO11, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Veelders, M, Kraushaar, T, Brueckner, S, Rhinow, D, Moesch, H.U, Essen, L.O.
Deposit date:2014-09-03
Release date:2015-08-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (0.89 Å)
Cite:Interactions by the Fungal Flo11 Adhesin Depend on a Fibronectin Type III-Like Adhesin Domain Girdled by Aromatic Bands.
Structure, 23, 2015
4UYT
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BU of 4uyt by Molmil
X-ray structure of the N-terminal domain of the flocculin Flo11 from Saccharomyces cerevisiae
Descriptor: ACETATE ION, FLOCCULATION PROTEIN FLO11, SODIUM ION
Authors:Kraushaar, T, Veelders, M, Brueckner, S, Rhinow, D, Moesch, H.U, Essen, L.O.
Deposit date:2014-09-03
Release date:2015-08-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Interactions by the Fungal Flo11 Adhesin Depend on a Fibronectin Type III-Like Adhesin Domain Girdled by Aromatic Bands.
Structure, 23, 2015
4V8F
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BU of 4v8f by Molmil
Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).
Descriptor: 16S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
Authors:Jenner, L, Demeshkina, N, Yusupov, M, Yusupova, G.
Deposit date:2011-12-07
Release date:2014-07-09
Last modified:2019-07-03
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:A new understanding of the decoding principle on the ribosome.
Nature, 484, 2012
4V8X
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BU of 4v8x by Molmil
Structure of Thermus thermophilus ribosome
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, ...
Authors:Feng, S, Chen, Y, Kamada, K, Wang, H, Tang, K, Wang, M, Gao, Y.G.
Deposit date:2013-07-19
Release date:2014-07-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Yoeb-Ribosome Structure: A Canonical Rnase that Requires the Ribosome for its Specific Activity.
Nucleic Acids Res., 41, 2013
4UWM
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BU of 4uwm by Molmil
Type II Baeyer-Villiger monooxygenase.The oxygenating constituent of 3,6-diketocamphane monooxygenase from CAM plasmid of Pseudomonas putida in complex with FMN.
Descriptor: 3,6-DIKETOCAMPHANE 1,6 MONOOXYGENASE, DI(HYDROXYETHYL)ETHER, FLAVIN MONONUCLEOTIDE, ...
Authors:Isupov, M.N, Schroeder, E, Gibson, R.P, Beecher, J, Donadio, G, Saneei, V, Dcunha, S, McGhie, E.J, Sayer, C, Davenport, C.F, Lau, P.C, Hasegawa, Y, Iwaki, H, Kadow, M, Loschinski, K, Bornscheuer, U.T, Bourenkov, G, Littlechild, J.A.
Deposit date:2014-08-12
Release date:2015-08-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Oxygenating Constituent of 3,6-Diketocamphane Monooxygenase from the Cam Plasmid of Pseudomonas Putida: The First Crystal Structure of a Type II Baeyer-Villiger Monooxygenase.
Acta Crystallogr.,Sect.D, 71, 2015
5Y7Z
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BU of 5y7z by Molmil
Complex structure of cyclin G-associated kinase with gefitinib
Descriptor: Cyclin-G-associated kinase, Gefitinib, NANOBODY, ...
Authors:Ohbayashi, N, Murayama, K, Kato-Murayama, M, Shirouzu, M.
Deposit date:2017-08-18
Release date:2018-08-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.804 Å)
Cite:Structural Basis for the Inhibition of Cyclin G-Associated Kinase by Gefitinib.
ChemistryOpen, 7, 2018
8HC5
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BU of 8hc5 by Molmil
SARS-CoV-2 wildtype S1 in complex with YB9-258 Fab and R1-32 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of R1-32 Fab, Heavy chain of YB9-258 Fab, ...
Authors:Liu, B, Gao, X, Chen, Q, Li, Z, Su, M, He, J, Xiong, X.
Deposit date:2022-11-01
Release date:2023-01-25
Last modified:2023-05-03
Method:ELECTRON MICROSCOPY (3.43 Å)
Cite:Somatically hypermutated antibodies isolated from SARS-CoV-2 Delta infected patients cross-neutralize heterologous variants.
Nat Commun, 14, 2023
4UR1
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BU of 4ur1 by Molmil
Crystal structure of the PCE reductive dehalogenase from S. multivorans in complex with dibromoethene
Descriptor: BENZAMIDINE, CIS-DIBROMOETHENE, GLYCEROL, ...
Authors:Bommer, M, Kunze, C, Fesseler, J, Schubert, T, Diekert, G, Dobbek, H.
Deposit date:2014-06-25
Release date:2014-10-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.649 Å)
Cite:Structural Basis for Organohalide Respiration.
Science, 346, 2014
4V0T
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BU of 4v0t by Molmil
Monomeric pseudorabies virus protease pUL26N at 2.1 A resolution
Descriptor: UL26
Authors:Zuehlsdorf, M, Werten, S, Palm, G.J, Hinrichs, W.
Deposit date:2014-09-18
Release date:2015-07-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Dimerization-Induced Allosteric Changes of the Oxyanion-Hole Loop Activate the Pseudorabies Virus Assemblin Pul26N, a Herpesvirus Serine Protease
Plos Pathog., 11, 2015
7W3W
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BU of 7w3w by Molmil
X-ray structure of apo-VmFbpA, a ferric ion-binding protein from Vibrio metschnikovii
Descriptor: Iron-utilization periplasmic protein
Authors:Lu, P, Sui, M, Zhang, M, Nagata, K.
Deposit date:2021-11-26
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.858 Å)
Cite:Rosmarinic Acid and Sodium Citrate Have a Synergistic Bacteriostatic Effect against Vibrio Species by Inhibiting Iron Uptake.
Int J Mol Sci, 22, 2021
8HCB
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BU of 8hcb by Molmil
SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 3 YB13-292 Fabs (2 RBD up)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of YB13-292 Fab, ...
Authors:Liu, B, Gao, X, Chen, Q, Li, Z, Su, M, He, J, Xiong, X.
Deposit date:2022-11-01
Release date:2023-01-25
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (4.18 Å)
Cite:Somatically hypermutated antibodies isolated from SARS-CoV-2 Delta infected patients cross-neutralize heterologous variants.
Nat Commun, 14, 2023

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