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PDB: 51964 results

4L0R
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Crystal structure of FGF2-interacting protein from Homo sapiens. Northeast Structural Genomics Consortium Target HR9027A.
Descriptor: Centrosomal protein of 57 kDa
Authors:Seetharaman, J, Lew, S, Su, M, Ciccosanti, C, Sahdev, S, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-05-31
Release date:2013-09-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Crystal structure of FGF2-interacting protein from Homo sapiens. Northeast Structural Genomics consortium id HR9027A
To be Published
3RPU
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BU of 3rpu by Molmil
Crystal structure of the MukE-MukF complex
Descriptor: Chromosome partition protein mukE, Chromosome partition protein mukF
Authors:Guarne, A, Gloyd, M, Ghirlando, R.
Deposit date:2011-04-27
Release date:2012-03-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The role of MukE in assembling a functional MukBEF complex.
J.Mol.Biol., 412, 2011
6GJE
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BU of 6gje by Molmil
Structure of the Amnionless(20-357)-Cubilin(36-135) complex
Descriptor: Cubilin, Protein amnionless
Authors:Larsen, C, Etzerodt, A, Madsen, M, Skjoedt, K, Moestrup, S.K, Andersen, C.B.F.
Deposit date:2018-05-16
Release date:2018-12-19
Last modified:2019-06-12
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural assembly of the megadalton-sized receptor for intestinal vitamin B12uptake and kidney protein reabsorption.
Nat Commun, 9, 2018
4L0V
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BU of 4l0v by Molmil
Tankyrase 2 in complex with 4'-chloro flavone
Descriptor: 2-(4-chlorophenyl)-4H-chromen-4-one, GLYCEROL, SULFATE ION, ...
Authors:Narwal, M, Haikarainen, T, Lehtio, L.
Deposit date:2013-06-01
Release date:2013-10-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Discovery of tankyrase inhibiting flavones with increased potency and isoenzyme selectivity.
J.Med.Chem., 56, 2013
3RQQ
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BU of 3rqq by Molmil
Crystal Structure of ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Bacillus subtilis in complex with P1,P3-Di(adenosine-5') triphosphate
Descriptor: ADP/ATP-DEPENDENT NAD(P)H-HYDRATE DEHYDRATASE, BIS(ADENOSINE)-5'-TRIPHOSPHATE, MAGNESIUM ION
Authors:Shumilin, I.A, Cymborowski, M, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-04-28
Release date:2011-07-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
1KD7
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BU of 1kd7 by Molmil
Crystal structure of an extracellular domain fragment of human BAFF
Descriptor: TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 13B
Authors:Karpusas, M, Cachero, T.G, Qian, F, Boriack-Sjodin, A, Mullen, C, Strauch, K, Hsu, Y.-M, Kalled, S.L.
Deposit date:2001-11-12
Release date:2002-11-12
Last modified:2017-02-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of Extracellular Human BAFF, a TNF Family Member that Stimulates B Lymphocytes
J.Mol.Biol., 315, 2002
6IMA
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BU of 6ima by Molmil
Crystal Structure of ALKBH1 without alpha-1 (N37-C369)
Descriptor: CITRIC ACID, Nucleic acid dioxygenase ALKBH1
Authors:Zhang, M, Yang, S, Zhao, W, Li, H.
Deposit date:2018-10-22
Release date:2020-01-22
Last modified:2020-04-08
Method:X-RAY DIFFRACTION (2.593 Å)
Cite:Mammalian ALKBH1 serves as an N6-mA demethylase of unpairing DNA.
Cell Res., 30, 2020
4P7O
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BU of 4p7o by Molmil
Structure of Escherichia coli PgaB C-terminal domain, P1 crystal form
Descriptor: Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase
Authors:Little, D.J, Li, G, Ing, C, DiFrancesco, B, Bamford, N.C, Robinson, H, Nitz, M, Pomes, R, Howell, P.L.
Deposit date:2014-03-27
Release date:2014-07-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Modification and periplasmic translocation of the biofilm exopolysaccharide poly-beta-1,6-N-acetyl-D-glucosamine.
Proc.Natl.Acad.Sci.USA, 111, 2014
4LDW
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BU of 4ldw by Molmil
Crystal structure of the DNA Binding Domain of arabidopsis thaliana auxin response factor 1, P21 structure
Descriptor: Auxin response factor 1, CHLORIDE ION
Authors:boer, D.R, Coll, M.
Deposit date:2013-06-25
Release date:2014-02-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Structural Basis for DNA Binding Specificity by the Auxin-Dependent ARF Transcription Factors.
Cell(Cambridge,Mass.), 156, 2014
3RS8
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BU of 3rs8 by Molmil
Crystal structure of tm0922, a fusion of a domain of unknown function and ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Thermotoga maritima in complex with ADP-ribose
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, GLYCEROL, MAGNESIUM ION, ...
Authors:Shumilin, I.A, Cymborowski, M, Lesley, S.A, Minor, W.
Deposit date:2011-05-02
Release date:2011-06-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
1KEI
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BU of 1kei by Molmil
Thermolysin (substrate-free)
Descriptor: CALCIUM ION, LYSINE, Thermolysin, ...
Authors:Senda, M, Senda, T, Kidokoro, S.
Deposit date:2001-11-16
Release date:2002-11-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure analyses of thermolysin in complex with its inhibitors
To be Published
6IA2
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BU of 6ia2 by Molmil
Crystal structure of a self-complementary RNA duplex recognized by Com
Descriptor: CHLORIDE ION, RNA (5'-R(*AP*GP*AP*GP*AP*AP*CP*CP*CP*GP*GP*AP*GP*UP*UP*CP*CP*CP*U)-3'), SULFATE ION
Authors:Nowacka, M, Fernandes, H, Kiliszek, A, Bernat, A, Lach, G, Bujnicki, J.M.
Deposit date:2018-11-26
Release date:2019-03-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Specific interaction of zinc finger protein Com with RNA and the crystal structure of a self-complementary RNA duplex recognized by Com.
Plos One, 14, 2019
4Q2C
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BU of 4q2c by Molmil
Crystal structure of CRISPR-associated protein
Descriptor: CRISPR-associated helicase Cas3, NICKEL (II) ION
Authors:Gong, B, Shin, M, Sun, J, van der Oost, J, Kim, J.-S.
Deposit date:2014-04-07
Release date:2014-11-19
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular insights into DNA interference by CRISPR-associated nuclease-helicase Cas3.
Proc.Natl.Acad.Sci.USA, 111, 2014
1KF0
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BU of 1kf0 by Molmil
Crystal Structure of Pig Muscle Phosphoglycerate Kinase Ternary Complex with AMP-PCP and 3PG
Descriptor: 3-PHOSPHOGLYCERIC ACID, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Kovari, Z, Flachner, B, Naray-Szabo, G, Vas, M.
Deposit date:2001-11-19
Release date:2002-07-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic and thiol-reactivity studies on the complex of pig muscle phosphoglycerate kinase with ATP analogues: correlation between nucleotide binding mode and helix flexibility.
Biochemistry, 41, 2002
3RTE
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BU of 3rte by Molmil
Crystal structure of tm0922, a fusion of a domain of unknown function and ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Thermotoga maritima soaked with NADP and ATP.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Shumilin, I.A, Cymborowski, M, Lesley, S.A, Minor, W.
Deposit date:2011-05-03
Release date:2011-06-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
4PZ0
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BU of 4pz0 by Molmil
The crystal structure of a solute binding protein from Bacillus anthracis str. Ames in complex with quorum-sensing signal autoinducer-2 (AI-2)
Descriptor: (2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Tan, K, Gu, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-03-28
Release date:2014-04-09
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:The crystal structure of a solute binding protein from Bacillus anthracis str. Ames in complex with quorum-sensing signal autoinducer-2 (AI-2).
To be Published
6U87
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BU of 6u87 by Molmil
Pseudomonas aeruginosa HasA mutant - Y75H
Descriptor: HasAp, PROTOPORPHYRIN IX CONTAINING FE
Authors:Brimberry, M, Lanzilotta, W, Wilks, A, Dent, A.
Deposit date:2019-09-04
Release date:2020-09-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Axial Heme Coordination by the Tyr-His Motif in the Extracellular Hemophore HasAp Is Critical for the Release of Heme to the HasR Receptor of Pseudomonas aeruginosa .
Biochemistry, 60, 2021
4Q3D
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BU of 4q3d by Molmil
PylD cocrystallized with L-Ornithine-Nd-D-ornithine and NAD+
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Quitterer, F, Beck, P, Bacher, A, Groll, M.
Deposit date:2014-04-11
Release date:2014-04-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Formation of Pyrroline and Tetrahydropyridine Rings in Amino Acids Catalyzed by Pyrrolysine Synthase (PylD).
Angew.Chem.Int.Ed.Engl., 53, 2014
3FVZ
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BU of 3fvz by Molmil
Structure of Peptidyl-alpha-hydroxyglycine alpha-Amidating Lyase (PAL)
Descriptor: ACETATE ION, CALCIUM ION, FE (III) ION, ...
Authors:Chufan, E.E, De, M, Eipper, B.A, Mains, R.E, Amzel, L.M.
Deposit date:2009-01-16
Release date:2009-09-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Amidation of bioactive peptides: the structure of the lyase domain of the amidating enzyme.
Structure, 17, 2009
1KFC
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BU of 1kfc by Molmil
CRYSTAL STRUCTURE OF ALPHAT183V MUTANT OF TRYPTOPHAN SYNTHASE FROM SALMONELLA TYPHIMURIUM With Indole Propanol Phosphate
Descriptor: INDOLE-3-PROPANOL PHOSPHATE, PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, ...
Authors:Kulik, V, Weyand, M, Siedel, R, Niks, D, Arac, D, Dunn, M.F, Schlichting, I.
Deposit date:2001-11-20
Release date:2003-01-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:On the Role of AlphaTHR183 in the Allosteric Regulation and Catalytic Mechanism of Tryptophan Synthase
J.Mol.Biol., 324, 2002
6U8Q
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BU of 6u8q by Molmil
CryoEM structure of HIV-1 cleaved synaptic complex (CSC) intasome
Descriptor: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, DNA (25-MER), DNA (27-MER), ...
Authors:Li, M, Chen, X, Craigie, R.
Deposit date:2019-09-05
Release date:2020-02-05
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.67 Å)
Cite:A Peptide Derived from Lens Epithelium-Derived Growth Factor Stimulates HIV-1 DNA Integration and Facilitates Intasome Structural Studies.
J.Mol.Biol., 432, 2020
4Q1G
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BU of 4q1g by Molmil
Structure and mechanism of a dehydratase/decarboxylase enzyme couple involved in polyketide beta-branching
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Polyketide biosynthesis enoyl-CoA isomerase PksI
Authors:Nair, A.V, Race, P.R, Till, M.
Deposit date:2014-04-03
Release date:2015-05-06
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and mechanism of a dehydratase/decarboxylase enzyme couple involved in polyketide beta-methyl branch incorporation.
Sci Rep, 10, 2020
4J9W
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BU of 4j9w by Molmil
Crystal structure of the complex of a hydroxyproline epimerase (TARGET EFI-506499, PSEUDOMONAS FLUORESCENS PF-5) with the inhibitor pyrrole-2-carboxylate
Descriptor: GLYCEROL, PYRROLE-2-CARBOXYLATE, Proline racemase family protein, ...
Authors:Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Stead, M, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-02-17
Release date:2013-03-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the complex of a hydroxyproline epimerase (TARGET EFI-506499, PSEUDOMONAS FLUORESCENS PF-5) with the inhibitor pyrrole-2-carboxylate
To be Published
3RT7
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BU of 3rt7 by Molmil
Crystal structure of tm0922, a fusion of a domain of unknown function and ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Thermotoga maritima in complex with ADP-glucose
Descriptor: ADENOSINE-5'-DIPHOSPHATE-GLUCOSE, GLYCEROL, MAGNESIUM ION, ...
Authors:Shumilin, I.A, Cymborowski, M, Lesley, S.A, Minor, W.
Deposit date:2011-05-03
Release date:2011-06-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
6GUL
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BU of 6gul by Molmil
Siderophore hydrolase EstB mutant E211Q from Aspergillus fumigatus
Descriptor: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
Authors:Ecker, F, Haas, H, Groll, M, Huber, E.M.
Deposit date:2018-06-19
Release date:2018-08-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Iron Scavenging in Aspergillus Species: Structural and Biochemical Insights into Fungal Siderophore Esterases.
Angew. Chem. Int. Ed. Engl., 57, 2018

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