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PDB: 51689 results

2PQW
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Crystal structure of L3MBTL1 in complex with H4K20Me2 (residues 17-25), trigonal form
Descriptor: ACETATE ION, Histone H4, Lethal(3)malignant brain tumor-like protein
Authors:Allali-Hassani, A, Liu, Y, Herzanych, N, Ouyang, H, Mackenzie, F, Crombet, L, Loppnau, P, Kozieradzki, I, Vedadi, M, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J.R, Structural Genomics Consortium (SGC)
Deposit date:2007-05-02
Release date:2007-07-31
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:L3MBTL1 recognition of mono- and dimethylated histones.
Nat.Struct.Mol.Biol., 14, 2007
5FKX
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BU of 5fkx by Molmil
Structure of E.coli inducible lysine decarboxylase at active pH
Descriptor: LYSINE DECARBOXYLASE, INDUCIBLE
Authors:Kandiah, E, Carriel, D, Perard, J, Malet, H, Bacia, M, Liu, K, Chan, S.W.S, Houry, W.A, Ollagnier de Choudens, S, Elsen, S, Gutsche, I.
Deposit date:2015-10-20
Release date:2016-09-21
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (6.1 Å)
Cite:Structural Insights Into the Escherichia Coli Lysine Decarboxylases and Molecular Determinants of Interaction with the Aaa+ ATPase Rava.
Sci.Rep., 6, 2016
5FKR
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Unraveling the first step of xyloglucan degradation by the soil saprophyte Cellvibrio japonicus through the functional and structural characterization of a potent GH74 endo-xyloglucanase
Descriptor: 1,2-ETHANEDIOL, BROMIDE ION, ENDO-1,4-BETA-GLUCANASE/XYLOGLUCANASE, ...
Authors:Attia, M, Stepper, J, Davies, G.J, Brumer, H.
Deposit date:2015-10-19
Release date:2015-11-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Functional and Structural Characterization of a Potent Gh74 Endo-Xyloglucanase from the Soil Saprophyte Cellvibrio Japonicus Unravels the First Step of Xyloglucan Degradation.
FEBS J., 283, 2016
5V5V
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Complex of NLGN2 with MDGA1 Ig1-Ig2
Descriptor: MAM domain-containing glycosylphosphatidylinositol anchor protein 1, Neuroligin-2
Authors:Gangwar, S.P, Machius, M, Rudenko, G.
Deposit date:2017-03-15
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (4.11 Å)
Cite:Molecular Mechanism of MDGA1: Regulation of Neuroligin 2:Neurexin Trans-synaptic Bridges.
Neuron, 94, 2017
5JG5
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Human carbonic anhydrase II (V121T/F131Y) complexed with benzo[d]thiazole-2-sulfonamide
Descriptor: 1,3-benzothiazole-2-sulfonamide, Carbonic anhydrase 2, ZINC ION
Authors:Fox, J.M, Kang, K, Sastry, M, Sherman, W, Sankaran, B, Zwart, P.H, Whitesides, G.M.
Deposit date:2016-04-19
Release date:2017-01-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase.
Angew. Chem. Int. Ed. Engl., 56, 2017
5V8A
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BU of 5v8a by Molmil
Crystal structure of Influenza A virus matrix protein M1 (NLS-88R, pH 7.3)
Descriptor: Matrix protein 1
Authors:Musayev, F.N, Safo, M.K, Desai, U.R, Xie, H, Mosier, P.D, Zhou, Q, Chiang, M.-J, Kosikova, M.
Deposit date:2017-03-21
Release date:2017-04-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Maintaining pH-dependent conformational flexibility of M1 is critical for efficient influenza A virus replication.
Emerg Microbes Infect, 6, 2017
5JGT
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BU of 5jgt by Molmil
Human carbonic anhydrase II (F131Y/L198A) complexed with 1,3-thiazole-2-sulfonamide
Descriptor: 1,3-thiazole-2-sulfonamide, Carbonic anhydrase 2, ZINC ION
Authors:Fox, J.M, Kang, K, Sastry, M, Sherman, W, Sankaran, B, Zwart, P.H, Whitesides, G.M.
Deposit date:2016-04-20
Release date:2017-01-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase.
Angew. Chem. Int. Ed. Engl., 56, 2017
5JH7
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BU of 5jh7 by Molmil
Tubulin-Eribulin complex
Descriptor: (1S,3S,6S,9S,12S,14R,16R,18S,20R,21R,22S,26R,29S,31R,32S,33R,35R,36S)-20-[(2S)-3-amino-2-hydroxypropyl]-21-methoxy-14-methyl-8,15-dimethylidene-2,19,30,34,37,39,40,41-octaoxanonacyclo[24.9.2.1~3,32~.1~3,33~.1~6,9~.1~12,16~.0~18,22~.0~29,36~.0~31,35~]hentetracontan-24-one (non-preferred name), 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Doodhi, H, Prota, A.E, Rodriguez-Garcia, R, Xiao, H, Custar, D.W, Bargsten, K, Katrukha, E.A, Hilbert, M, Hua, S, Jiang, K, Grigoriev, I, Yang, C.-P.H, Cox, D, Band Horwitz, S, Kapitein, L.C, Akhmanova, A, Steinmetz, M.O.
Deposit date:2016-04-20
Release date:2016-06-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Termination of Protofilament Elongation by Eribulin Induces Lattice Defects that Promote Microtubule Catastrophes.
Curr.Biol., 26, 2016
5AES
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BU of 5aes by Molmil
Crystal Structure of murine Chronophin (Pyridoxal Phosphate Phosphatase) in Complex with a PNP-derived Inhibitor
Descriptor: GLYCEROL, MAGNESIUM ION, PYRIDOXAL PHOSPHATE PHOSPHATASE, ...
Authors:Knobloch, G, Jabari, N, Koehn, M, Gohla, A, Schindelin, H.
Deposit date:2015-01-09
Release date:2015-04-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.751 Å)
Cite:Synthesis of Hydrolysis-Resistant Pyridoxal 5'-Phosphate Analogs and Their Biochemical and X-Ray Crystallographic Characterization with the Pyridoxal Phosphatase Chronophin.
Bioorg.Med.Chem., 23, 2015
5UXY
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BU of 5uxy by Molmil
The crystal structure of a DegV family protein from Eubacterium eligens loaded with heptadecanoic acid to 1.80 Angstrom resolution (ALTERNATIVE REFINEMENT OF PDB 3FDJ with HEPTADECANOIC acid)
Descriptor: ACETIC ACID, DegV family protein, SODIUM ION, ...
Authors:Cuypers, M.G, Ericson, M, subramanian, C, White, S.W, Rock, C.O.
Deposit date:2017-02-23
Release date:2018-11-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of the Staphylococcus aureus Fatty acid Kinase (Fak) B1 protein loaded with palmitic acid to 1.83 Angstroem resolution
J.Biol.Chem., 2018
5JJE
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BU of 5jje by Molmil
Structure of the SRII/HtrII Complex in I212121 space group ("U" shape)
Descriptor: EICOSANE, RETINAL, Sensory rhodopsin II transducer, ...
Authors:Ishchenko, A, Round, E, Borshchevskiy, V, Grudinin, S, Gushchin, I, Klare, J, Remeeva, A, Polovinkin, V, Utrobin, P, Balandin, T, Engelhard, M, Bueldt, G, Gordeliy, V.
Deposit date:2016-04-23
Release date:2017-02-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:New Insights on Signal Propagation by Sensory Rhodopsin II/Transducer Complex.
Sci Rep, 7, 2017
5JLU
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BU of 5jlu by Molmil
Crystal Structure of Adhesin competence repressor (AdcR) from Streptococcus pyogenes
Descriptor: Adhesin competence repressor, ZINC ION
Authors:Do, H, Kumaraswami, M.
Deposit date:2016-04-27
Release date:2017-05-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of Adhesin competence repressor (AdcR) from Streptococcus pyogenes
To Be Published
1BQC
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BU of 1bqc by Molmil
BETA-MANNANASE FROM THERMOMONOSPORA FUSCA
Descriptor: PROTEIN (BETA-MANNANASE)
Authors:Hilge, M, Gloor, S.M, Piontek, K.
Deposit date:1998-08-12
Release date:1999-08-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High-resolution native and complex structures of thermostable beta-mannanase from Thermomonospora fusca - substrate specificity in glycosyl hydrolase family 5.
Structure, 6, 1998
5TNO
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BU of 5tno by Molmil
Discovery of novel aminobenzisoxazole derivatives as orally available factor IXa inhibitors
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Coagulation factor IX, SODIUM ION, ...
Authors:Sakurada, I, Endo, T, Hikita, K, Hirabayashi, T, Hosaka, Y, Kato, Y, Maeda, Y, Matsumoto, S, Mizuno, T, Nagasue, H, Nishimura, T, Shimada, S, Shinozaki, M, Taguchi, K, Takeuchi, K, Yokoyama, T, Hruza, A, Reichert, P, Zhang, T, Wood, H.B, Nakao, K, Furusako, S.
Deposit date:2016-10-14
Release date:2017-04-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Discovery of novel aminobenzisoxazole derivatives as orally available factor IXa inhibitors.
Bioorg. Med. Chem. Lett., 27, 2017
1BPV
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BU of 1bpv by Molmil
TITIN MODULE A71 FROM HUMAN CARDIAC MUSCLE, NMR, 50 STRUCTURES
Descriptor: TITIN
Authors:Muhle-Goll, C, Pastore, A, Nilges, M.
Deposit date:1998-08-11
Release date:1999-08-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The three-dimensional structure of a type I module from titin: a prototype of intracellular fibronectin type III domains.
Structure, 6, 1998
5JJN
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BU of 5jjn by Molmil
Structure of the SRII/HtrII(G83F) Complex in P212121 space group ("V" shape)
Descriptor: EICOSANE, RETINAL, Sensory rhodopsin II transducer, ...
Authors:Ishchenko, A, Round, E, Borshchevskiy, V, Grudinin, S, Gushchin, I, Klare, J, Remeeva, A, Polovinkin, V, Utrobin, P, Balandin, T, Engelhard, M, Bueldt, G, Gordeliy, V.
Deposit date:2016-04-24
Release date:2017-02-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:New Insights on Signal Propagation by Sensory Rhodopsin II/Transducer Complex.
Sci Rep, 7, 2017
1JDK
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BU of 1jdk by Molmil
solution structure of lactam analogue (EDap) of HIV gp41 600-612 loop.
Descriptor: ACETYL GROUP
Authors:Phan Chan Du, A, Limal, D, Semetey, V, Dali, H, Jolivet, M, Desgranges, C, Cung, M.T, Briand, J.P, Petit, M.C, Muller, S.
Deposit date:2001-06-14
Release date:2003-07-01
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structural and immunological characterisation of heteroclitic peptide analogues corresponding to the 600-612 region of the HIV envelope gp41 glycoprotein.
J.Mol.Biol., 323, 2002
5JFN
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BU of 5jfn by Molmil
Crystal structure of Rhodopseudomonas palustris propionaldehyde dehydrogenase with bound CoA and acylated Cys330
Descriptor: Aldehyde dehydrogenase, COENZYME A, PENTAETHYLENE GLYCOL, ...
Authors:Zarzycki, J, Sutter, M, Kerfeld, C.A.
Deposit date:2016-04-19
Release date:2017-03-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:In Vitro Characterization and Concerted Function of Three Core Enzymes of a Glycyl Radical Enzyme - Associated Bacterial Microcompartment.
Sci Rep, 7, 2017
5TMD
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BU of 5tmd by Molmil
Crystal structure of Os79 from O. sativa in complex with U2F and trichothecene.
Descriptor: Glycosyltransferase, Os79, URIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUORO-ALPHA-D-GLUCOSE, ...
Authors:Wetterhorn, K, Newmister, S.A, Caniza, R.K, Busman, M, McCormick, S.P, Berthiller, F, Adam, G, Rayment, I.
Deposit date:2016-10-12
Release date:2016-11-02
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Crystal Structure of Os79 (Os04g0206600) from Oryza sativa: A UDP-glucosyltransferase Involved in the Detoxification of Deoxynivalenol.
Biochemistry, 55, 2016
8DVV
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BU of 8dvv by Molmil
Recombinant mouse RyR2 triple phosphomimetic mutant S2807D/S2813D/S2030D in complex with FKBP12.6 and nanodisc under open-state conditions
Descriptor: CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 2, ...
Authors:Iyer, K.A, Hu, Y, Murayama, T, Samso, M.
Deposit date:2022-07-29
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (3.68 Å)
Cite:Recombinant mouse RyR2 triple phosphomimetic mutant S2807D/S2813D/S2030D in complex with FKBP12.6 and nanodisc under open-state conditions
To Be Published
3C3I
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BU of 3c3i by Molmil
Evolution of chlorella virus dUTPase
Descriptor: DEOXYURIDINE-5'-DIPHOSPHATE, Deoxyuridine triphosphatase, MAGNESIUM ION
Authors:Yamanishi, M, Homma, K, Zhang, Y, Etten, L.V.J, Moriyama, H.
Deposit date:2008-01-28
Release date:2009-02-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystallization and crystal-packing studies of Chlorella virus deoxyuridine triphosphatase.
Acta Crystallogr.,Sect.F, 65, 2009
5TJD
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BU of 5tjd by Molmil
Computer-based rational design of improved functionality for antibody catalysts toward organophosphorus compounds
Descriptor: FAB A.17 L47K mutant HEAVY CHAIN, FAB A.17 L47K mutant Light Chain
Authors:Chatziefthimiou, S, Stepanova, A, Smirnov, I, Gabibov, A, Wilmanns, M.
Deposit date:2016-10-04
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Multiscale computation delivers organophosphorus reactivity and stereoselectivity to immunoglobulin scavengers.
Proc.Natl.Acad.Sci.USA, 2020
1BN9
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BU of 1bn9 by Molmil
RESPONSE ELEMENT OF THE ORPHAN NUCLEAR RECEPTOR REV-ERB BETA
Descriptor: DNA (5'-D(*CP*TP*GP*AP*CP*CP*TP*AP*CP*AP*TP*TP*CP*TP*A)-3'), DNA (5'-D(*TP*AP*GP*AP*AP*TP*GP*TP*AP*GP*GP*TP*CP*AP*G)-3')
Authors:Castagne, C, Terenzi, H, Zakin, M.M, Delepierre, M.
Deposit date:1998-07-31
Release date:1998-08-05
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the orphan nuclear receptor rev-erb beta response element by 1H, 31P NMR and molecular simulation
Biochimie, 82, 2000
8DTY
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BU of 8dty by Molmil
Recombinant mouse RyR2 triple phosphomimetic mutant S2807D/S2813D/S2030D in complex with FKBP12.6 and nanodisc under closed-state conditions
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 2, ZINC ION
Authors:Iyer, K.A, Hu, Y, Murayama, T, Samso, M.
Deposit date:2022-07-26
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Recombinant mouse RyR2 triple phosphomimetic mutant S2807D/S2813D/S2030D in complex with FKBP12.6 and nanodisc under closed-state conditions
To Be Published
8DTZ
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BU of 8dtz by Molmil
Recombinant mouse RyR2 triple phosphonull mutant S2807A/S2813A/S2030A in complex with FKBP12.6 and nanodisc under closed-state conditions
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 2, ZINC ION
Authors:Iyer, K.A, Hu, Y, Murayama, T, Samso, M.
Deposit date:2022-07-26
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Recombinant mouse RyR2 triple phosphonull mutant S2807A/S2813A/S2030A in complex with FKBP12.6 and nanodisc under closed-state conditions
To Be Published

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