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PDB: 51964 results

3V1D
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BU of 3v1d by Molmil
Crystal structure of de novo designed MID1-cobalt
Descriptor: COBALT (II) ION, Computational design, MID1-cobalt, ...
Authors:Der, B.S, Machius, M, Miley, M.J, Kuhlman, B.
Deposit date:2011-12-09
Release date:2012-01-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.239 Å)
Cite:Metal-mediated affinity and orientation specificity in a computationally designed protein homodimer.
J.Am.Chem.Soc., 134, 2012
3R2H
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BU of 3r2h by Molmil
1.7 A resolution structure of As-Isolated FtnA from Pseudomonas aeruginosa (pH 10.5)
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, Bacterioferritin, SODIUM ION
Authors:Lovell, S.W, Battaile, K.P, Yao, H, Jepkorir, G, Nama, P.V, Weeratunga, S, Rivera, M.
Deposit date:2011-03-14
Release date:2011-05-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Two distinct ferritin-like molecules in Pseudomonas aeruginosa: the product of the bfrA gene is a bacterial ferritin (FtnA) and not a bacterioferritin (Bfr).
Biochemistry, 50, 2011
6SUH
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BU of 6suh by Molmil
Crystal structure of human transthyretin in complex with 3-O-methyltolcapone, a tolcapone analogue
Descriptor: 3-O-methyltolcapone, Transthyretin
Authors:Loconte, V, Cianci, M, Menozzi, I, Sbravati, D, Sansone, F, Casnati, A, Berni, R.
Deposit date:2019-09-14
Release date:2020-08-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Interactions of tolcapone analogues as stabilizers of the amyloidogenic protein transthyretin.
Bioorg.Chem., 103, 2020
6KAE
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BU of 6kae by Molmil
Crosslinked alpha(Fe-CO)-beta(Ni) human hemoglobin A in the T quaternary structure at 95 K: Light
Descriptor: BUT-2-ENEDIAL, CARBON MONOXIDE, Hemoglobin subunit alpha, ...
Authors:Shibayama, N, Park, S.Y, Ohki, M, Sato-Tomita, A.
Deposit date:2019-06-21
Release date:2020-02-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Direct observation of ligand migration within human hemoglobin at work.
Proc.Natl.Acad.Sci.USA, 117, 2020
3RQT
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BU of 3rqt by Molmil
1.5 Angstrom Crystal Structure of the Complex of Ligand Binding Component of ABC-type Import System from Staphylococcus aureus with Nickel and two Histidines
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HISTIDINE, NICKEL (II) ION, ...
Authors:Minasov, G, Halavaty, A, Shuvalova, L, Dubrovska, I, Winsor, J, Kiryukhina, O, Falugi, F, Bottomley, M, Bagnoli, F, Grandi, G, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-04-28
Release date:2011-05-11
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:1.5 Angstrom Crystal Structure of the Complex of Ligand Binding Component of ABC-type Import System from Staphylococcus aureus with Nickel and two Histidines.
TO BE PUBLISHED
4P8Z
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BU of 4p8z by Molmil
Speciation of a group I intron into a lariat capping ribozyme
Descriptor: Didymium iridis partial IGS, 18S rRNA gene, I-DirI gene and partial ITS1
Authors:Meyer, M, Nielsen, H, Olieric, V, Roblin, P, Johansen, S.D, Westhof, E, Masquida, B.
Deposit date:2014-04-01
Release date:2014-05-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.85 Å)
Cite:Speciation of a group I intron into a lariat capping ribozyme.
Proc.Natl.Acad.Sci.USA, 111, 2014
6KAO
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BU of 6kao by Molmil
Carbonmonoxy human hemoglobin C in the R quaternary structure at 95 K: Dark
Descriptor: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Shibayama, N, Park, S.Y, Ohki, M, Sato-Tomita, A.
Deposit date:2019-06-23
Release date:2020-02-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Direct observation of ligand migration within human hemoglobin at work.
Proc.Natl.Acad.Sci.USA, 117, 2020
4K32
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BU of 4k32 by Molmil
Crystal structure of geneticin bound to the leishmanial rRNA A-site
Descriptor: GENETICIN, RNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*UP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3')
Authors:Shalev, M, Kondo, J, Adir, N, Baasov, T.
Deposit date:2013-04-10
Release date:2013-07-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Identification of the molecular attributes required for aminoglycoside activity against Leishmania.
Proc.Natl.Acad.Sci.USA, 110, 2013
6KAR
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BU of 6kar by Molmil
Carbonmonoxy human hemoglobin C in the R quaternary structure at 140 K: Light
Descriptor: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Shibayama, N, Park, S.Y, Ohki, M, Sato-Tomita, A.
Deposit date:2019-06-24
Release date:2020-02-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Direct observation of ligand migration within human hemoglobin at work.
Proc.Natl.Acad.Sci.USA, 117, 2020
1KR6
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BU of 1kr6 by Molmil
Thermolysin complexed with Z-D-Glutamic acid (benzyloxycarbonyl-D-Glutamic acid)
Descriptor: CALCIUM ION, D-GLUTAMIC ACID, Thermolysin, ...
Authors:Senda, M, Senda, T, Kidokoro, S.
Deposit date:2002-01-09
Release date:2003-01-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure analyses of thermolysin in complex with its inhibitors.
To be Published
4H2U
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BU of 4h2u by Molmil
Crystal structure of Bradyrhizobium japonicum glycine:[carrier protein] ligase complexed with cognate carrier protein and ATP
Descriptor: 4'-PHOSPHOPANTETHEINE, ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Luic, M, Weygand-Durasevic, I, Ivic, N, Mocibob, M.
Deposit date:2012-09-13
Release date:2013-03-06
Last modified:2013-05-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Adaptation of aminoacyl-tRNA synthetase catalytic core to carrier protein aminoacylation.
Structure, 21, 2013
3UXI
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BU of 3uxi by Molmil
Crystal structure of L-rhamnose isomerase W38A mutant from Bacillus halodurans
Descriptor: L-Rhamnose isomerase, MANGANESE (II) ION
Authors:Doan, T.T.N, Prabhu, P, Kim, J.K, Jeya, M, Kang, L.W, Lee, J.K.
Deposit date:2011-12-05
Release date:2012-12-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Structure-based studies on the metal binding of two-metal-dependent sugar isomerases.
Febs J., 281, 2014
6G1Z
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BU of 6g1z by Molmil
Crystal structure of a fluorescence optimized bathy phytochrome PAiRFP2 derived from wild-type Agp2 in its Pfr state.
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 3-[(2Z)-2-({3-(2-carboxyethyl)-5-[(E)-(4-ethenyl-3-methyl-5-oxo-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl}methylidene)-5-{(Z)-[(3E,4S)-3-ethylidene-4-methyl-5-oxopyrrolidin-2-ylidene]methyl}-4-methyl-2H-pyrrol-3-yl]propanoic acid, ...
Authors:Sauthof, L, Schmidt, A, Szczepek, M, Scheerer, P.
Deposit date:2018-03-22
Release date:2018-11-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural snapshot of a bacterial phytochrome in its functional intermediate state.
Nat Commun, 9, 2018
6FXV
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BU of 6fxv by Molmil
Crystal structure of ERK2 in complex with an adenosine derivative
Descriptor: DIMETHYL SULFOXIDE, Mitogen-activated protein kinase 1, SULFATE ION, ...
Authors:Gelin, M, Labesse, G.
Deposit date:2018-03-09
Release date:2019-03-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:None
To be published
3COQ
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BU of 3coq by Molmil
Structural Basis for Dimerization in DNA Recognition by Gal4
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*DAP*DCP*DCP*DGP*DGP*DAP*DGP*DGP*DAP*DCP*DAP*DGP*DTP*DCP*DCP*DTP*DCP*DCP*DGP*DG)-3'), DNA (5'-D(*DTP*DCP*DCP*DGP*DGP*DAP*DGP*DGP*DAP*DCP*DTP*DGP*DTP*DCP*DCP*DTP*DCP*DCP*DGP*DG)-3'), ...
Authors:Hong, M, Fitzgerald, M.X, Harper, S, Luo, C, Speicher, D.W.
Deposit date:2008-03-29
Release date:2008-07-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for dimerization in DNA recognition by gal4.
Structure, 16, 2008
6K7N
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BU of 6k7n by Molmil
Cryo-EM structure of the human P4-type flippase ATP8A1-CDC50 (E1P state)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL HEMISUCCINATE, Cell cycle control protein 50A, ...
Authors:Hiraizumi, M, Yamashita, K, Nishizawa, T, Nureki, O.
Deposit date:2019-06-07
Release date:2019-08-28
Last modified:2021-02-10
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Cryo-EM structures capture the transport cycle of the P4-ATPase flippase.
Science, 365, 2019
1KJP
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BU of 1kjp by Molmil
Thermolysin complexed with Z-L-Glutamic acid (benzyloxycarbonyl-L-Glutamic acid)
Descriptor: CALCIUM ION, GLUTAMIC ACID, Thermolysin, ...
Authors:Senda, M, Senda, T, Kidokoro, S.
Deposit date:2001-12-05
Release date:2002-12-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure analyses of thermolysin in complex with its inhibitors
To be Published
4HGG
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BU of 4hgg by Molmil
Crystal structure of P450 BM3 5F5R heme domain variant complexed with styrene
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Bifunctional P-450/NADPH-P450 reductase, GLYCEROL, ...
Authors:Shehzad, A, Panneerselvam, S, Bocola, M, Mueller-Dieckmann, J, Wilmanns, M, Schwaneberg, U.
Deposit date:2012-10-08
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:P450 BM3 crystal structures reveal the role of the charged surface residue Lys/Arg184 in inversion of enantioselective styrene epoxidation.
Chem.Commun.(Camb.), 49, 2013
6K2H
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BU of 6k2h by Molmil
structural characterization of mutated NreA protein in nitrate binding site from staphylococcus aureus.
Descriptor: 1,2-ETHANEDIOL, NreA
Authors:Sangare, L, Chen, W, Wang, C, Chen, X, Wu, M, Zhang, X, Zang, J.
Deposit date:2019-05-14
Release date:2020-03-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into the conformational change of Staphylococcus aureus NreA at C-terminus.
Biotechnol.Lett., 42, 2020
4PCF
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BU of 4pcf by Molmil
Structure-based protein engineering of a monomeric triosephosphate isomerase towards changing substrate specificity
Descriptor: Ma18-TIM
Authors:Krause, M, Neubauer, P, Wierenga, R.K.
Deposit date:2014-04-15
Release date:2015-04-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Crystal structures of two monomeric triosephosphate isomerase variants identified via a directed-evolution protocol selecting for L-arabinose isomerase activity.
Acta Crystallogr.,Sect.F, 72, 2016
6SYE
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BU of 6sye by Molmil
Crystal structure of orthorhombic lysozyme in presence of the dye bromophenol blue at pH 7.0
Descriptor: CHLORIDE ION, Lysozyme C, bromophenol blue
Authors:Camara-Artigas, A, Plaza-Garrido, M, Salinas-Garcia, M.C.
Deposit date:2019-09-27
Release date:2020-09-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Lysozyme crystals dyed with bromophenol blue: where has the dye gone?
Acta Crystallogr D Struct Biol, 76, 2020
1KK6
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BU of 1kk6 by Molmil
Crystal Structure of Vat(D) (Form I)
Descriptor: STREPTOGRAMIN A ACETYLTRANSFERASE
Authors:Sugantino, M, Roderick, S.L.
Deposit date:2001-12-06
Release date:2002-02-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Vat(D): an acetyltransferase that inactivates streptogramin group A antibiotics.
Biochemistry, 41, 2002
3D37
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BU of 3d37 by Molmil
The crystal structure of the tail protein from Neisseria meningitidis MC58
Descriptor: CHLORIDE ION, Tail protein, 43 kDa
Authors:Zhang, R, Li, H, Bargassa, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-05-09
Release date:2008-07-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of the tail protein from Neisseria meningitidis MC58.
To be Published
4PCK
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BU of 4pck by Molmil
Crystal structure of the P22S mutant of N-terminal CS domain of human Shq1
Descriptor: GLYCEROL, Protein SHQ1 homolog
Authors:Singh, M, Wang, Z, Cascio, D, Feigon, J.
Deposit date:2014-04-15
Release date:2015-01-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Structure and Interactions of the CS Domain of Human H/ACA RNP Assembly Protein Shq1.
J.Mol.Biol., 427, 2015
1KER
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BU of 1ker by Molmil
The crystal structure of dTDP-D-glucose 4,6-dehydratase (RmlB) from Streptococcus suis with dTDP-D-glucose bound
Descriptor: 2'DEOXY-THYMIDINE-5'-DIPHOSPHO-ALPHA-D-GLUCOSE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION, ...
Authors:Allard, S.T.M, Beis, K, Giraud, M.-F, Hegeman, A.D, Gross, J.W, Whitfield, C, Graninger, M, Messner, P, Allen, A.G, Naismith, J.H.
Deposit date:2001-11-17
Release date:2002-01-25
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Toward a structural understanding of the dehydratase mechanism.
Structure, 10, 2002

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數據於2024-10-09公開中

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