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PDB: 51787 results

4AZR
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Human epidermal fatty acid-binding protein (FABP5) in complex with the endocannabinoid anandamide
Descriptor: CHLORIDE ION, FATTY ACID-BINDING PROTEIN, EPIDERMAL, ...
Authors:Sanson, B, Wang, T, Sun, J, Kaczocha, M, Ojima, I, Deutsch, D, Li, H.
Deposit date:2012-06-26
Release date:2013-08-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystallographic Study of Fabp5 as an Intracellular Endocannabinoid Transporter.
Acta Crystallogr.,Sect.D, 70, 2014
4B17
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BU of 4b17 by Molmil
Crystal structure of C2498 2'-O-ribose methyltransferase RlmM from Escherichia coli in complex with S-adenosylmethionine
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE M, ...
Authors:Punekar, A.S, Shepherd, T.R, Liljeruhm, J, Forster, A.C, Selmer, M.
Deposit date:2012-07-07
Release date:2012-08-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of Rlmm, the 2'O-Ribose Methyltransferase for C2498 of Escherichia Coli 23S Rrna.
Nucleic Acids Res., 40, 2012
8BB8
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BU of 8bb8 by Molmil
Crystal structure of human aldehyde dehydrogenase ALDH3A1 in complex with octanal
Descriptor: ACETATE ION, Aldehyde dehydrogenase, dimeric NADP-preferring, ...
Authors:Schwartz, M, Neiers, F.
Deposit date:2022-10-12
Release date:2023-04-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Characterization of human oxidoreductases involved in aldehyde odorant metabolism.
Sci Rep, 13, 2023
4B4L
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CRYSTAL STRUCTURE OF AN ARD DAP-KINASE 1 MUTANT
Descriptor: DEATH-ASSOCIATED PROTEIN KINASE 1, PENTAETHYLENE GLYCOL, SULFATE ION
Authors:Temmerman, K, Pogenberg, V, Jonko, W, Wilmanns, M.
Deposit date:2012-07-31
Release date:2013-08-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A Pef/Y Substrate Recognition and Signature Motif Plays a Critical Role in Dapk-Related Kinase Activity.
Chem.Biol., 21, 2014
2M12
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BU of 2m12 by Molmil
Solution structure of the ID3 stem loop of domain 1 of the ai5gamma group II intron
Descriptor: RNA (5'-R(*GP*GP*GP*UP*GP*UP*AP*UP*UP*GP*GP*AP*AP*AP*UP*GP*AP*GP*CP*AP*CP*CP*C)-3')
Authors:Popovic, M, Greenbaum, N.L.
Deposit date:2012-11-13
Release date:2013-10-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Role of helical constraints of the EBS1-IBS1 duplex of a group II intron on demarcation of the 5' splice site.
Rna, 20, 2014
3GZD
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BU of 3gzd by Molmil
Human selenocysteine lyase, P1 crystal form
Descriptor: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, NITRATE ION, Selenocysteine lyase
Authors:Karlberg, T, Hogbom, M, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kotenyova, T, Moche, M, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Schutz, P, Siponen, M.I, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Wisniewska, M, Schuler, H, Structural Genomics Consortium (SGC)
Deposit date:2009-04-07
Release date:2009-04-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Biochemical discrimination between selenium and sulfur 1: a single residue provides selenium specificity to human selenocysteine lyase.
Plos One, 7, 2012
2M06
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BU of 2m06 by Molmil
NMR structure of OmpX in phopspholipid nanodiscs
Descriptor: Outer membrane protein X
Authors:Hagn, F.X, Etzkorn, M, Raschle, T, Wagner, G, Membrane Protein Structures by Solution NMR (MPSbyNMR)
Deposit date:2012-10-21
Release date:2012-12-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Optimized phospholipid bilayer nanodiscs facilitate high-resolution structure determination of membrane proteins.
J.Am.Chem.Soc., 135, 2013
4B3P
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BU of 4b3p by Molmil
Structures of HIV-1 RT and RNA-DNA Complex Reveal a Unique RT Conformation and Substrate Interface
Descriptor: DNA, P51 RT, REVERSE TRANSCRIPTASE/RIBONUCLEASE H, ...
Authors:Lapkouski, M, Tian, L, Miller, J.T, Le Grice, S.F.J, Yang, W.
Deposit date:2012-07-25
Release date:2013-01-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (4.839 Å)
Cite:Complexes of HIV-1 RT, Nnrti and RNA/DNA Hybrid Reveal a Structure Compatible with RNA Degradation
Nat.Struct.Mol.Biol., 20, 2013
8BPR
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BU of 8bpr by Molmil
Complex of RecF-RecO-RecR-DNA from Thermus thermophilus (low resolution reconstruction).
Descriptor: DNA repair protein RecO, DNA replication and repair protein RecF, MAGNESIUM ION, ...
Authors:Nirwal, S, Czarnocki-Cieciura, M, Chaudhary, A, Zajko, W, Skowronek, K, Chamera, S, Figiel, M, Nowotny, M.
Deposit date:2022-11-17
Release date:2023-04-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:Mechanism of RecF-RecO-RecR cooperation in bacterial homologous recombination.
Nat.Struct.Mol.Biol., 30, 2023
4BCD
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PROLYL OLIGOPEPTIDASE FROM PORCINE BRAIN WITH A NON-COVALENTLY BOUND P2-substituted N-acyl-prolylpyrrolidine inhibitor
Descriptor: 1-[(2S,4S)-4-[4-(4-fluorophenyl)-1,2,3-triazol-1-yl]-2-pyrrolidin-1-ylcarbonyl-pyrrolidin-1-yl]-4-phenyl-butan-1-one, GLYCEROL, PROLYL ENDOPEPTIDASE, ...
Authors:VanDerVeken, P, Fulop, V, Rea, D, Gerard, M, VanElzen, R, Joossens, J, Cheng, J.D, Baekelandt, V, DeMeester, I, Lambeir, A.M, Augustyns, K.
Deposit date:2012-10-01
Release date:2013-03-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:P2-Substituted N-Acylprolylpyrrolidine Inhibitors of Prolyl Oligopeptidase: Biochemical Evaluation, Binding Mode Determination, and Assessment in a Cellular Model of Synucleinopathy.
J.Med.Chem., 55, 2012
2JBY
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BU of 2jby by Molmil
A viral protein unexpectedly mimics the structure and function of pro- survival Bcl-2
Descriptor: BCL-2 HOMOLOGOUS ANTAGONIST/KILLER 2, M11L PROTEIN, SODIUM ION
Authors:Kvansakul, M, Van Delft, M.F, Lee, E.F, Gulbis, J.M, Fairlie, W.D, Huang, D.C.S, Colman, P.M.
Deposit date:2006-12-14
Release date:2007-03-27
Last modified:2018-06-13
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:A structural viral mimic of prosurvival Bcl-2: a pivotal role for sequestering proapoptotic Bax and Bak.
Mol. Cell, 25, 2007
4B67
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BU of 4b67 by Molmil
A. fumigatus ornithine hydroxylase (SidA), re-oxidised state bound to NADP and ornithine
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, L-ORNITHINE N5 MONOOXYGENASE, ...
Authors:Franceschini, S, Fedkenheuer, M, Vogelaar, N.J, Robinson, H.H, Sobrado, P, Mattevi, A.
Deposit date:2012-08-09
Release date:2012-10-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural Insight Into the Mechanism of Oxygen Activation and Substrate Selectivity of Flavin-Dependent N-Hydroxylating Monooxygenases.
Biochemistry, 51, 2012
8BI3
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BU of 8bi3 by Molmil
Structure of E. coli Class 2 L-asparaginase EcAIII, mutant M200W (crystal M200W#1)
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Sciuk, A, Ruszkowski, M, Jaskolski, M, Loch, J.I.
Deposit date:2022-11-01
Release date:2023-05-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.452 Å)
Cite:The effects of nature-inspired amino acid substitutions on structural and biochemical properties of the E. coli L-asparaginase EcAIII.
Protein Sci., 32, 2023
8BKF
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BU of 8bkf by Molmil
Structure of E. coli Class 2 L-asparaginase EcAIII, mutant M200T (crystal M200T#o)
Descriptor: CHLORIDE ION, Isoaspartyl peptidase subunit alpha, Isoaspartyl peptidase subunit beta, ...
Authors:Sciuk, A, Ruszkowski, M, Jaskolski, M, Loch, J.I.
Deposit date:2022-11-09
Release date:2023-05-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.221 Å)
Cite:The effects of nature-inspired amino acid substitutions on structural and biochemical properties of the E. coli L-asparaginase EcAIII.
Protein Sci., 32, 2023
4AXW
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BU of 4axw by Molmil
CRYSTAL STRUCTURE OF MOUSE CADHERIN-23 EC1-2 AND PROTOCADHERIN-15 EC1- 2, FORM I 2.2A.
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CADHERIN-23, CALCIUM ION, ...
Authors:Sotomayor, M, Weihofen, W, Gaudet, R, Corey, D.P.
Deposit date:2012-06-14
Release date:2012-11-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Structure of a Force-Conveying Cadherin Bond Essential for Inner-Ear Mechanotransduction
Nature, 492, 2012
4BDI
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BU of 4bdi by Molmil
Fragment-based screening identifies a new area for inhibitor binding to checkpoint kinase 2 (CHK2)
Descriptor: 1,2-ETHANEDIOL, 1-acetyl-N-(5-methylpyridin-2-yl)piperidine-4-carboxamide, CHLORIDE ION, ...
Authors:Silva-Santisteban, M.C, Westwood, I.M, Boxall, K, Brown, N, Peacock, S, McAndrew, C, Barrie, E, Richards, M, Mirza, A, Oliver, A.W, Burke, R, Hoelder, S, Jones, K, Aherne, G.W, Blagg, J, Collins, I, Garrett, M.D, van Montfort, R.L.M.
Deposit date:2012-10-05
Release date:2013-06-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Fragment-Based Screening Maps Inhibitor Interactions in the ATP-Binding Site of Checkpoint Kinase 2.
Plos One, 8, 2013
2RQE
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BU of 2rqe by Molmil
Solution structure of the silkworm bGRP/GNBP3 N-terminal domain reveals the mechanism for b-1,3-glucan specific recognition
Descriptor: Beta-1,3-glucan-binding protein
Authors:Takahasi, K, Ochiai, M, Horiuchi, M, Kumeta, H, Ogura, K, Ashida, M, Inagaki, F.
Deposit date:2009-04-22
Release date:2009-06-23
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the silkworm betaGRP/GNBP3 N-terminal domain reveals the mechanism for beta-1,3-glucan-specific recognition.
Proc.Natl.Acad.Sci.USA, 106, 2009
8BP9
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BU of 8bp9 by Molmil
Structure of E. coli Class 2 L-asparaginase EcAIII, mutant M200W (crystal M200W#2)
Descriptor: CHLORIDE ION, Isoaspartyl peptidase subunit alpha, Isoaspartyl peptidase subunit beta, ...
Authors:Sciuk, A, Jaskolski, M, Loch, J.I.
Deposit date:2022-11-16
Release date:2023-05-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The effects of nature-inspired amino acid substitutions on structural and biochemical properties of the E. coli L-asparaginase EcAIII.
Protein Sci., 32, 2023
2JTI
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BU of 2jti by Molmil
Solution structure of the yeast iso-1-cytochrome c (T12A) : yeast cytochrome c peroxidase complex
Descriptor: Cytochrome c iso-1, Cytochrome c peroxidase, mitochondrial, ...
Authors:Ubbink, M, Volkov, A.N.
Deposit date:2007-08-01
Release date:2008-07-22
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:Shifting the equilibrium between the encounter state and the specific form of a protein complex by interfacial point mutations.
J.Am.Chem.Soc., 132, 2010
2JUS
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BU of 2jus by Molmil
alpha RgIA, a Novel Conotoxin that Blocks the alpha9-alpha10 nAChR
Descriptor: Alpha-conotoxin RgIA
Authors:Feng, Z, Ellison, M.
Deposit date:2007-09-02
Release date:2011-05-25
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:Alpha-RgIA, a novel conotoxin that blocks the alpha9alpha10 nAChR: structure and identification of key receptor-binding residues.
J.Mol.Biol., 377, 2008
4B3O
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BU of 4b3o by Molmil
Structures of HIV-1 RT and RNA-DNA Complex Reveal a Unique RT Conformation and Substrate Interface
Descriptor: (-)-6-CHLORO-4-CYCLOPROPYLETHYNYL-4-TRIFLUOROMETHYL-1,4-DIHYDRO-2H-3,1-BENZOXAZIN-2-ONE, 5'-D(*CP*GP*TP*AP*TP*GP*CP*CP*TP*AP*TP*AP*GP*TP *TP*AP*TP*TP*GP*TP*GP*GP*CP*C)-3', 5'-R(*AP*UP*GP*AP*3DRP*GP*GP*CP*CP*AP*CP*AP*AP*UP*AP *AP*CP*UP*AP*UP*AP*GP*GP*CP*AP*UP*A)-3', ...
Authors:Lapkouski, M, Tian, L, Miller, J.T, Le Grice, S.F.J, Yang, W.
Deposit date:2012-07-25
Release date:2013-01-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Complexes of HIV-1 RT, Nnrti and RNA/DNA Hybrid Reveal a Structure Compatible with RNA Degradation
Nat.Struct.Mol.Biol., 20, 2013
4B41
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BU of 4b41 by Molmil
Crystal structure of an amyloid-beta binding single chain antibody G7
Descriptor: ANTIBODY G7, CHLORIDE ION, GLYCEROL
Authors:Beringer, D.X, Dorresteijn, B, Rutten, L, Wienk, H, el Khattabi, M, Kroon-Batenburg, L.M.J, Verrips, C.T.
Deposit date:2012-07-27
Release date:2013-08-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.191 Å)
Cite:Crystal Structure of an Amyloid-Beta Binding Single Chain Antibody G7
To be Published
4B65
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BU of 4b65 by Molmil
A. fumigatus ornithine hydroxylase (SidA), reduced state bound to NADP(H)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, L-ORNITHINE N5 MONOOXYGENASE, ...
Authors:Franceschini, S, Fedkenheuer, M, Vogelaar, N.J, Robinson, H.H, Sobrado, P, Mattevi, A.
Deposit date:2012-08-09
Release date:2012-10-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structural Insight Into the Mechanism of Oxygen Activation and Substrate Selectivity of Flavin-Dependent N-Hydroxylating Monooxygenases.
Biochemistry, 51, 2012
4YUK
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BU of 4yuk by Molmil
Multiconformer synchrotron model of CypA at 260 K
Descriptor: Peptidyl-prolyl cis-trans isomerase A
Authors:Keedy, D.A, Kenner, L.R, Warkentin, M, Woldeyes, R.A, Thompson, M.C, Brewster, A.S, Van Benschoten, A.H, Baxter, E.L, Hopkins, J.B, Uervirojnangkoorn, M, McPhillips, S.E, Song, J, Mori, R.A, Holton, J.M, Weis, W.I, Brunger, A.T, Soltis, M, Lemke, H, Gonzalez, A, Sauter, N.K, Cohen, A.E, van den Bedem, H, Thorne, R.E, Fraser, J.S.
Deposit date:2015-03-18
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.
Elife, 4, 2015
2JYA
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BU of 2jya by Molmil
NMR solution structure of protein ATU1810 from Agrobacterium tumefaciens. Northeast Structural Genomics Consortium target AtR23, Ontario Centre for Structural Proteomics Target ATC1776
Descriptor: Uncharacterized protein Atu1810
Authors:Lemak, A, Yee, A, Gutmanas, A, Fares, C, Karra, M, Semesi, A, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG), Ontario Centre for Structural Proteomics (OCSP)
Deposit date:2007-12-07
Release date:2007-12-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of protein ATU1810 form Agrobacterium tumefaciens.
To be Published

224931

数据于2024-09-11公开中

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