Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 52161 results

409D
DownloadVisualize
BU of 409d by Molmil
CRYSTAL STRUCTURE OF AN RNA R(CCCIUGGG) WITH THREE INDEPENDENT DUPLEXES INCORPORATING TANDEM I.U WOBBLES
Descriptor: RNA (5'-R(*CP*CP*CP*IP*UP*GP*GP*G)-3')
Authors:Pan, B, Mitra, S.N, Sun, L, Hart, D, Sundaralingam, M.
Deposit date:1998-06-26
Release date:1999-01-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of an RNA octamer duplex r(CCCIUGGG)2 incorporating tandem I.U wobbles.
Nucleic Acids Res., 26, 1998
418D
DownloadVisualize
BU of 418d by Molmil
5'-R(*GP*UP*GP*CP*AP*CP*A)-D(P*C)-3'
Descriptor: RNA (5'-R(*GP*UP*GP*CP*AP*CP*AP*C)-3')
Authors:Mitra, S.N, Biswas, R, Shi, K, Sundaralingam, M.
Deposit date:1998-08-12
Release date:2003-06-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of an RNA duplex [r(gugcaca)dC]2 with 3'-dinucleoside overhangs forming a superhelix.
J.Biomol.Struct.Dyn., 11, 2000
4A2M
DownloadVisualize
BU of 4a2m by Molmil
Structure of the periplasmic domain of the heparin and heparan sulphate sensing hybrid two component system BT4663 in apo and ligand bound forms
Descriptor: 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-4)-2-acetamido-2-deoxy-6-O-sulfo-beta-D-glucopyranose, TWO-COMPONENT SYSTEM SENSOR HISTIDINE KINASE/RESPONSE
Authors:Lowe, E.C, Basle, A, Czjzek, M, Firbank, S.J, Bolam, D.N.
Deposit date:2011-09-27
Release date:2012-05-02
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:A Scissor Blade-Like Closing Mechanism Implicated in Transmembrane Signaling in a Bacteroides Hybrid Two-Component System.
Proc.Natl.Acad.Sci.USA, 109, 2012
410D
DownloadVisualize
BU of 410d by Molmil
DUPLEX [5'-D(GCGTA+TACGC)]2 WITH INCORPORATED 2'-O-ETHOXYMETHYLENE RIBONUCLEOSIDE
Descriptor: DNA (5'-D(*GP*CP*GP*TP*AP*(T38)P*AP*CP*GP*C)-3'), SPERMINE
Authors:Tereshko, V, Portmann, S, Tay, E.C, Martin, P, Natt, F, Altmann, K.H, Egli, M.
Deposit date:1998-06-30
Release date:1998-07-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Correlating structure and stability of DNA duplexes with incorporated 2'-O-modified RNA analogues.
Biochemistry, 37, 1998
437D
DownloadVisualize
BU of 437d by Molmil
CRYSTAL STRUCTURE OF AN RNA PSEUDOKNOT FROM BEET WESTERN YELLOW VIRUS INVOLVED IN RIBOSOMAL FRAMESHIFTING
Descriptor: MAGNESIUM ION, RNA PSEUDOKNOT, SODIUM ION
Authors:Su, L, Chen, L, Egli, M, Berger, J.M, Rich, A.
Deposit date:1998-11-24
Release date:1998-12-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Minor groove RNA triplex in the crystal structure of a ribosomal frameshifting viral pseudoknot.
Nat.Struct.Biol., 6, 1999
4A93
DownloadVisualize
BU of 4a93 by Molmil
RNA Polymerase II elongation complex containing a CPD Lesion
Descriptor: 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP*CP*T*TTP*TP*TP*CP*C BRUP*GP*GP*TP*CP*AP*TP*T)-3', 5'-D(*TP*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP*GP*CP*TP)-3', 5'-R(*UP*UP*CP*GP*AP*CP*CP*AP*GP*GP*AP*AP)-3', ...
Authors:Walmacq, C, Cheung, A.C.M, Kireeva, M.L, Lubkowska, L, Ye, C, Gotte, D, Strathern, J.N, Carell, T, Cramer, P, Kashlev, M.
Deposit date:2011-11-23
Release date:2012-03-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Mechanism of Translesion Transcription by RNA Polymerase II and its Role in Cellular Resistance to DNA Damage.
Mol.Cell, 46, 2012
4A6L
DownloadVisualize
BU of 4a6l by Molmil
beta-tryptase inhibitor
Descriptor: 1-{3-[1-({5-[(2-fluorophenyl)ethynyl]furan-2-yl}carbonyl)piperidin-4-yl]phenyl}methanamine, TRYPTASE ALPHA/BETA-1
Authors:Mathieu, M, Maignan, S.
Deposit date:2011-11-04
Release date:2012-01-25
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure-Based Library Design and the Discovery of a Potent and Selective Mast Cell Beta-Tryptase Inhibitor as an Oral Therapeutic Agent.
Bioorg.Med.Chem.Lett., 22, 2012
7RPV
DownloadVisualize
BU of 7rpv by Molmil
Crystal structure of affinity-enhancing and catalytically inactive ACE2 in complex with SARS-CoV-2 RBD
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, Spike protein S1, ...
Authors:Chen, Y, Tolbert, D.W, Pazgier, M.
Deposit date:2021-08-04
Release date:2021-12-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.54 Å)
Cite:Engineered ACE2-Fc counters murine lethal SARS-CoV-2 infection through direct neutralization and Fc-effector activities.
Biorxiv, 2021
4AC7
DownloadVisualize
BU of 4ac7 by Molmil
The crystal structure of Sporosarcina pasteurii urease in complex with citrate
Descriptor: 1,2-ETHANEDIOL, CITRATE ANION, HYDROXIDE ION, ...
Authors:Benini, S, Kosikowska, P, Cianci, M, Gonzalez Vara, A, Berlicki, L, Ciurli, S.
Deposit date:2011-12-14
Release date:2013-01-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Crystal Structure of Sporosarcina Pasteurii Urease in a Complex with Citrate Provides New Hints for Inhibitor Design.
J.Biol.Inorg.Chem., 18, 2013
6UD7
DownloadVisualize
BU of 6ud7 by Molmil
Crystal structure of full-length human DCAF15-DDB1(deltaBPB)-DDA1-RBM39 in complex with indisulam
Descriptor: DDB1- and CUL4-associated factor 15, DET1- and DDB1-associated protein 1, DNA damage-binding protein 1,DNA damage-binding protein 1, ...
Authors:Bussiere, D.E, Shu, W, Xie, L, Knapp, M.
Deposit date:2019-09-18
Release date:2019-12-18
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of indisulam-mediated RBM39 recruitment to DCAF15 E3 ligase complex.
Nat.Chem.Biol., 16, 2020
4A0O
DownloadVisualize
BU of 4a0o by Molmil
Symmetry-free cryo-EM map of TRiC in the nucleotide-free (apo) state
Descriptor: T-COMPLEX PROTEIN 1 SUBUNIT BETA
Authors:Cong, Y, Schroder, G.F, Meyer, A.S, Jakana, J, Ma, B, Dougherty, M.T, Schmid, M.F, Reissmann, S, Levitt, M, Ludtke, S.L, Frydman, J, Chiu, W.
Deposit date:2011-09-10
Release date:2012-02-15
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (10.5 Å)
Cite:Symmetry-Free Cryo-Em Structures of the Chaperonin Tric Along its ATPase-Driven Conformational Cycle.
Embo J., 31, 2012
4WR5
DownloadVisualize
BU of 4wr5 by Molmil
Crystal Structure of GST Mutated with Halogenated Tyrosine (7cGST-1)
Descriptor: GLUTATHIONE, Glutathione S-transferase class-mu 26 kDa isozyme, SULFATE ION
Authors:Akasaka, R, Kawazoe, M, Tomabechi, Y, Ohtake, K, Itagaki, T, Takemoto, C, Shirouzu, M, Yokoyama, S, Sakamoto, K.
Deposit date:2014-10-23
Release date:2015-08-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Protein stabilization utilizing a redefined codon
Sci Rep, 5, 2015
4A27
DownloadVisualize
BU of 4a27 by Molmil
Crystal structure of human synaptic vesicle membrane protein VAT-1 homolog-like protein
Descriptor: 1,2-ETHANEDIOL, SYNAPTIC VESICLE MEMBRANE PROTEIN VAT-1 HOMOLOG-LIKE
Authors:Vollmar, M, Shafqat, N, Muniz, J.R.C, Krojer, T, Allerston, C, von Delft, F, Bountra, C, Arrowsmith, C.H, Weigelt, J, Edwards, A, Yue, W.W, Oppermann, U.
Deposit date:2011-09-22
Release date:2011-10-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein
To be Published
4AR7
DownloadVisualize
BU of 4ar7 by Molmil
X-ray structure of the cyan fluorescent protein mTurquoise
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:von Stetten, D, Noirclerc-Savoye, M, Goedhart, J, Gadella, T.W.J, Royant, A.
Deposit date:2012-04-21
Release date:2012-08-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Structure of a Fluorescent Protein from Aequorea Victoria Bearing the Obligate-Monomer Mutation A206K.
Acta Crystallogr.,Sect.F, 68, 2012
4AAQ
DownloadVisualize
BU of 4aaq by Molmil
ATP-triggered molecular mechanics of the chaperonin GroEL
Descriptor: 60 KDA CHAPERONIN, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Clare, D.K, Vasishtan, D, Stagg, S, Quispe, J, Farr, G.W, Topf, M, Horwich, A.L, Saibil, H.R.
Deposit date:2011-12-05
Release date:2012-12-12
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (8 Å)
Cite:ATP-Triggered Conformational Changes Delineate Substrate-Binding and -Folding Mechanics of the Groel Chaperonin.
Cell(Cambridge,Mass.), 149, 2012
4ARG
DownloadVisualize
BU of 4arg by Molmil
Structure of the immature retroviral capsid at 8A resolution by cryo- electron microscopy
Descriptor: M-PMV DPRO CANC PROTEIN
Authors:Bharat, T.A.M, Davey, N.E, Ulbrich, P, Riches, J.D, Marco, A.D, Rumlova, M, Sachse, C, Ruml, T, Briggs, J.A.G.
Deposit date:2012-04-23
Release date:2012-05-30
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Structure of the Immature Retroviral Capsid at 8A Resolution by Cryo-Electron Microscopy.
Nature, 487, 2012
4A9Z
DownloadVisualize
BU of 4a9z by Molmil
CRYSTAL STRUCTURE OF HUMAN P63 TETRAMERIZATION DOMAIN
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, TUMOR PROTEIN 63
Authors:Muniz, J.R.C, Coutandin, D, Salah, E, Chaikuad, A, Vollmar, M, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Dotsch, V, von Delft, F, Knapp, S.
Deposit date:2011-11-30
Release date:2011-12-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystal Structure of Human P63 Tetramerization Domain
To be Published
4AHW
DownloadVisualize
BU of 4ahw by Molmil
Flo5A showing a heptanuclear gadolinium cluster on its surface
Descriptor: CHLORIDE ION, FLOCCULATION PROTEIN FLO5, GADOLINIUM ATOM
Authors:Veelders, M, Essen, L.-O.
Deposit date:2012-02-07
Release date:2012-10-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Complex Gadolinium-Oxo Clusters Formed Along Concave Protein Surfaces.
Chembiochem, 13, 2012
8UAK
DownloadVisualize
BU of 8uak by Molmil
Crystal structure of the catalytic domain of human PKC alpha (D463N, V568I, S657E) in complex with Darovasertib (NVP-LXS196) at 2.82-A resolution
Descriptor: (6M)-3-amino-N-[3-(4-amino-4-methylpiperidin-1-yl)pyridin-2-yl]-6-[3-(trifluoromethyl)pyridin-2-yl]pyrazine-2-carboxamide, Protein kinase C alpha type
Authors:Romanowski, M.J, Lam, J, Visser, M.
Deposit date:2023-09-21
Release date:2024-01-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Discovery of Darovasertib (NVP-LXS196), a Pan-PKC Inhibitor for the Treatment of Metastatic Uveal Melanoma.
J.Med.Chem., 67, 2024
7RLU
DownloadVisualize
BU of 7rlu by Molmil
Structure of ALDH1L1 (10-formyltetrahydrofolate dehydrogenase) in complex with NADP
Descriptor: 4'-PHOSPHOPANTETHEINE, Cytosolic 10-formyltetrahydrofolate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Tsybovsky, Y, Sereda, V, Golczak, M, Krupenko, N.I, Krupenko, S.A.
Deposit date:2021-07-26
Release date:2022-01-12
Last modified:2022-02-02
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure of putative tumor suppressor ALDH1L1.
Commun Biol, 5, 2022
7RLT
DownloadVisualize
BU of 7rlt by Molmil
Structure of ligand-free ALDH1L1 (10-formyltetrahydrofolate dehydrogenase)
Descriptor: 4'-PHOSPHOPANTETHEINE, Cytosolic 10-formyltetrahydrofolate dehydrogenase
Authors:Tsybovsky, Y, Sereda, V, Golczak, M, Krupenko, N.I, Krupenko, S.A.
Deposit date:2021-07-26
Release date:2022-01-12
Last modified:2022-02-02
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of putative tumor suppressor ALDH1L1.
Commun Biol, 5, 2022
6U5F
DownloadVisualize
BU of 6u5f by Molmil
CryoEM Structure of Pyocin R2 - precontracted - collar
Descriptor: Collar PA0615, Sheath PA0622, Tube PA0623
Authors:Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
Deposit date:2019-08-27
Release date:2020-04-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6UA1
DownloadVisualize
BU of 6ua1 by Molmil
Crystal Structure of the metallo-beta-lactamase L1 from Stenotrophomonas maltophilia in the no-metal bound form
Descriptor: 1,2-ETHANEDIOL, Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase)
Authors:Kim, Y, Maltseva, N, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-09-10
Release date:2019-09-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the metallo-beta-lactamase L1 from Stenotrophomonas maltophilia in the no-metal bound form.
To Be Published
6UAF
DownloadVisualize
BU of 6uaf by Molmil
Crystal Structure of the Metallo-beta-lactamase L1 from Stenotrophomonas maltophilia in the Complex with Hydrolyzed Imipnem
Descriptor: (2R,4S)-2-[(1S,2R)-1-carboxy-2-hydroxypropyl]-4-[(2-{[(Z)-iminomethyl]amino}ethyl)sulfanyl]-3,4-dihydro-2H-pyrrole-5-ca rboxylic acid, Putative metallo-beta-lactamase l1 (Beta-lactamase type ii) (Ec 3.5.2.6) (Penicillinase), ZINC ION
Authors:Kim, Y, Maltseva, N, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-09-10
Release date:2019-09-18
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of the Metallo-beta-lactamase L1 from Stenotrophomonas maltophilia in the Complex with Hydrolyzed Imipnem
To Be Published
4TO7
DownloadVisualize
BU of 4to7 by Molmil
N-Terminal domain of C. Reinhardtii SAS-6 homolog bld12p Q93E F145W K146R (NN24)
Descriptor: Centriole protein
Authors:Hilbert, M, Kraatz, S.H.W.
Deposit date:2014-06-05
Release date:2015-06-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.252 Å)
Cite:SAS-6 engineering reveals interdependence between cartwheel and microtubules in determining centriole architecture.
Nat.Cell Biol., 18, 2016

226707

数据于2024-10-30公开中

PDB statisticsPDBj update infoContact PDBjnumon