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PDB: 51964 results

5JU8
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BU of 5ju8 by Molmil
Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Arenz, S, Bock, L.V, Graf, M, Innis, C.A, Beckmann, R, Grubmueller, H, Vaiana, A.C, Wilson, D.N.
Deposit date:2016-05-10
Release date:2016-07-20
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:A combined cryo-EM and molecular dynamics approach reveals the mechanism of ErmBL-mediated translation arrest.
Nat Commun, 7, 2016
8Q40
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BU of 8q40 by Molmil
Crystal structure of cA4 activated Can2 in complex with a cleaved DNA substrate
Descriptor: Cyclic tetraadenosine monophosphate (cA4), DNA (5'-D(*TP*CP*A)-3'), DUF1887 family protein, ...
Authors:Jungfer, K, Sigg, A, Jinek, M.
Deposit date:2023-08-04
Release date:2023-11-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Substrate selectivity and catalytic activation of the type III CRISPR ancillary nuclease Can2.
Nucleic Acids Res., 52, 2024
5FEA
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BU of 5fea by Molmil
Domain Swapped Bromodomain from Leishmania donovani
Descriptor: BROMIDE ION, Bromosporine, Uncharacterized protein
Authors:Walker, J.R, Hou, C.F.D, Lin, Y.H, LOPPNAU, P, Dong, A, El Bakkouri, M, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Hui, R, Structural Genomics Consortium (SGC)
Deposit date:2015-12-16
Release date:2016-01-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Domain Swapped Bromodomain from Leishmania donovani
To be published
8PFB
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BU of 8pfb by Molmil
Structure of a heteropolymeric type 4 pilus from a monoderm bacterium
Descriptor: Type IV pilin PilE1
Authors:Anger, R, Pieulle, L, Shahin, M, Valette, O, Le Guenno, H, Kosta, A, Pelicic, V, Fronzes, R.
Deposit date:2023-06-15
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Structure of a heteropolymeric type 4 pilus from a monoderm bacterium.
Nat Commun, 14, 2023
2XIX
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BU of 2xix by Molmil
Protein kinase Pim-1 in complex with fragment-1 from crystallographic fragment screen
Descriptor: 3,5-DIAMINO-1H-[1,2,4]TRIAZOLE, PROTO-ONCOGENE SERINE/THREONINE-PROTEIN KINASE PIM-1
Authors:Schulz, M.N, Fanghanel, J, Schafer, M, Badock, V, Briem, H, Boemer, U, Nguyen, D, Husemann, M, Hillig, R.C.
Deposit date:2010-07-01
Release date:2011-02-23
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystallographic Fragment Screen Identifies Cinnamic Acid Derivatives as Starting Points for Potent Pim-1 Inhibitors
Acta Crystallogr.,Sect.D, 67, 2011
3FMK
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BU of 3fmk by Molmil
P38 kinase crystal structure in complex with 6-(2,4-Difluoro-phenoxy)-8-methyl-2-((S)-1-methyl-2-tetrazol-2-yl-ethylamino)-8H-pyrido[2,3-d]pyrimidin-7-one
Descriptor: 6-(2,4-difluorophenoxy)-8-methyl-2-{[(1S)-1-methyl-2-(2H-tetrazol-2-yl)ethyl]amino}pyrido[2,3-d]pyrimidin-7(8H)-one, Mitogen-activated protein kinase 14
Authors:Kuglstatter, A, Ghate, M.
Deposit date:2008-12-22
Release date:2009-12-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Discovery of Pamapimod and R1487 as Orally Bioavailable and Highly Selective Inhibitors of p38 Map Kinase
To be Published
5JWV
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BU of 5jwv by Molmil
T4 Lysozyme L99A/M102Q with Ethylbenzene Bound
Descriptor: Endolysin, PHENYLETHANE
Authors:Lee, H, Fischer, M, Shoichet, B.K, Liu, S.-Y.
Deposit date:2016-05-12
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Hydrogen Bonding of 1,2-Azaborines in the Binding Cavity of T4 Lysozyme Mutants: Structures and Thermodynamics.
J.Am.Chem.Soc., 138, 2016
7SP0
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BU of 7sp0 by Molmil
Crystal structure of human SFPQ L534I mutant in complex with zinc
Descriptor: Splicing factor, proline- and glutamine-rich, ZINC ION
Authors:Lee, M.
Deposit date:2021-11-01
Release date:2022-10-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Familial ALS-associated SFPQ variants promote the formation of SFPQ cytoplasmic aggregates in primary neurons.
Open Biology, 12, 2022
8Q41
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BU of 8q41 by Molmil
Crystal structure of Can2 (E341A) bound to cA4 and TTTAAA ssDNA
Descriptor: Cyclic tetraadenosine monophosphate (cA4), DNA (5'-D(*TP*TP*AP*AP*A)-3'), DUF1887 family protein, ...
Authors:Jungfer, K, Sigg, A, Jinek, M.
Deposit date:2023-08-04
Release date:2023-11-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Substrate selectivity and catalytic activation of the type III CRISPR ancillary nuclease Can2.
Nucleic Acids Res., 52, 2024
5JXH
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BU of 5jxh by Molmil
Structure the proprotein convertase furin in complex with meta-guanidinomethyl-Phac-RVR-Amba at 2.0 Angstrom resolution.
Descriptor: 2UC-ARG-VAL-ARG-00S, CALCIUM ION, CHLORIDE ION, ...
Authors:Dahms, S.O, Arciniega, M, Steinmetzer, T, Huber, R, Than, M.E.
Deposit date:2016-05-13
Release date:2016-10-05
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the unliganded form of the proprotein convertase furin suggests activation by a substrate-induced mechanism.
Proc.Natl.Acad.Sci.USA, 113, 2016
8Q42
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BU of 8q42 by Molmil
Crystal structure of cA4-bound Can2 (E341A) in complex with oligo-A DNA
Descriptor: Cyclic tetraadenosine monophosphate (cA4), DNA (5'-D(*AP*AP*AP*A)-3'), DUF1887 family protein, ...
Authors:Jungfer, K, Sigg, A, Jinek, M.
Deposit date:2023-08-04
Release date:2023-11-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Substrate selectivity and catalytic activation of the type III CRISPR ancillary nuclease Can2.
Nucleic Acids Res., 52, 2024
3WQZ
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BU of 3wqz by Molmil
Crystal structure of Archaeoglobus fulgidus alanyl-tRNA synthetase in complex with a tRNA(Ala) variant having A3.U70
Descriptor: '5'-O-(N-(L-ALANYL)-SULFAMOYL)ADENOSINE, Alanine--tRNA ligase, RNA (75-MER), ...
Authors:Naganuma, M, Sekine, S, Yokoyama, S.
Deposit date:2014-02-05
Release date:2014-06-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.489 Å)
Cite:The selective tRNA aminoacylation mechanism based on a single G.U pair
Nature, 510, 2014
8Q43
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BU of 8q43 by Molmil
Crystal structure of cA4-bound Can2 (E341A) in complex with oligo-C DNA
Descriptor: Cyclic tetraadenosine monophosphate (cA4), DNA (5'-D(*CP*CP*CP*CP*C)-3'), DUF1887 family protein, ...
Authors:Jungfer, K, Sigg, A, Jinek, M.
Deposit date:2023-08-04
Release date:2023-11-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Substrate selectivity and catalytic activation of the type III CRISPR ancillary nuclease Can2.
Nucleic Acids Res., 52, 2024
5FV0
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BU of 5fv0 by Molmil
The cytoplasmic domain of EssC
Descriptor: 3'-O-[2-(METHYLAMINO)BENZOYL]ADENOSINE 5'-(TETRAHYDROGEN TRIPHOSPHATE), ADENOSINE-5'-TRIPHOSPHATE, ESX secretion system protein EccC, ...
Authors:Zoltner, M, Ng, W.M.A.V, Palmer, T, Hunter, W.N.
Deposit date:2016-02-01
Release date:2016-03-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:EssC: domain structures inform on the elusive translocation channel in the Type VII secretion system.
Biochem. J., 473, 2016
6GV1
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BU of 6gv1 by Molmil
Crystal structure of E.coli Multidrug/H+ antiporter MdfA in outward open conformation with bound Fab fragment
Descriptor: Fab fragment YN1074 heavy chain, Fab fragment YN1074 light chain, Major Facilitator Superfamily multidrug/H+ antiporter MdfA from E.coli, ...
Authors:Nagarathinam, K, Parthier, C, Stubbs, M.T, Tanabe, M.
Deposit date:2018-06-20
Release date:2018-10-03
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Outward open conformation of a Major Facilitator Superfamily multidrug/H+antiporter provides insights into switching mechanism.
Nat Commun, 9, 2018
6GDR
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BU of 6gdr by Molmil
DNA binding with a minimal scaffold: Structure-function analysis of Lig E DNA ligases
Descriptor: ADENOSINE MONOPHOSPHATE, DNA, DNA (5'-D(*TP*TP*CP*CP*GP*AP*TP*AP*GP*TP*GP*GP*GP*GP*TP*CP*GP*CP*AP*AP*T)-3'), ...
Authors:Williamson, A, Grigic, M, Leiros, H.K.S.
Deposit date:2018-04-24
Release date:2018-07-25
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:DNA binding with a minimal scaffold: structure-function analysis of Lig E DNA ligases.
Nucleic Acids Res., 46, 2018
2XSS
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BU of 2xss by Molmil
Crystal structure of GAFb from the human phosphodiesterase 5
Descriptor: CGMP-SPECIFIC 3', 5'-CYCLIC PHOSPHODIESTERASE
Authors:Schlicker, C, Russwurm, M, Steegborn, C.
Deposit date:2010-09-30
Release date:2011-05-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the Gaf-B Domain from Human Phosphodiesterase 5.
Proteins, 79, 2011
8Q44
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BU of 8q44 by Molmil
Crystal structure of cA4-bound Can2 (E364R) in complex with oligo-T DNA
Descriptor: Cyclic tetraadenosine monophosphate (cA4), DNA (5'-D(*TP*TP*T)-3'), DUF1887 family protein, ...
Authors:Jungfer, K, Sigg, A, Jinek, M.
Deposit date:2023-08-04
Release date:2023-11-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Substrate selectivity and catalytic activation of the type III CRISPR ancillary nuclease Can2.
Nucleic Acids Res., 52, 2024
3WTL
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BU of 3wtl by Molmil
Crystal Structure of Lymnaea stagnalis Acetylcholine Binding Protein Complexed with Nitromethylene Analogue of Imidacloprid
Descriptor: 2-chloro-5-{[(2E)-2-(nitromethylidene)imidazolidin-1-yl]methyl}pyridine, Acetylcholine-binding protein
Authors:Okajima, T, Ihara, M, Yamashita, A, Oda, T, Matsuda, K.
Deposit date:2014-04-11
Release date:2015-02-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Studies on an acetylcholine binding protein identify a basic residue in loop G on the beta 1 strand as a new structural determinant of neonicotinoid actions
Mol.Pharmacol., 86, 2014
3DWY
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BU of 3dwy by Molmil
Crystal Structure of the Bromodomain of Human CREBBP
Descriptor: 1,2-ETHANEDIOL, CREB-binding protein
Authors:Filippakopoulos, P, Picaud, S, Fedorov, O, Karim, R, Pike, A.C.W, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Wickstroem, M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2008-07-23
Release date:2008-08-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Histone recognition and large-scale structural analysis of the human bromodomain family.
Cell(Cambridge,Mass.), 149, 2012
2Y21
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BU of 2y21 by Molmil
The mechanisms of HAMP-mediated signaling in transmembrane receptors - the A291V mutant
Descriptor: HAMP
Authors:Zeth, K, Ferris, H.U, Hulko, M, Lupas, A.N.
Deposit date:2010-12-12
Release date:2011-03-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The mechanisms of HAMP-mediated signaling in transmembrane receptors.
Structure, 19, 2011
6ZBV
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BU of 6zbv by Molmil
Inward-open structure of human glycine transporter 1 in complex with a benzoylisoindoline inhibitor and sybody Sb_GlyT1#7
Descriptor: Sodium- and chloride-dependent glycine transporter 1,Sodium- and chloride-dependent glycine transporter 1, Sybody Sb_GlyT1#7, [5-fluoranyl-6-(oxan-4-yloxy)-1,3-dihydroisoindol-2-yl]-[5-methylsulfonyl-2-[2,2,3,3,3-pentakis(fluoranyl)propoxy]phenyl]methanone
Authors:Shahsavar, A, Stohler, P, Bourenkov, G, Zimmermann, I, Siegrist, M, Guba, W, Pinard, E, Sinning, S, Seeger, M.A, Schneider, T.R, Dawson, R.J.P, Nissen, P.
Deposit date:2020-06-09
Release date:2021-03-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural insights into the inhibition of glycine reuptake.
Nature, 591, 2021
6Z8G
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BU of 6z8g by Molmil
Crystal structure of VSG13 soaked in 0.5 M used to phase VSG13 to solve the structure.
Descriptor: BROMIDE ION, SULFATE ION, Variant surface glycoprotein MITat 1.13, ...
Authors:Stebbins, C.E, Hempelmann, A, Van Straaten, M, Zeelen, J.
Deposit date:2020-06-02
Release date:2021-03-17
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structure of trypanosome coat protein VSGsur and function in suramin resistance.
Nat Microbiol, 6, 2021
2Y0Q
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BU of 2y0q by Molmil
The mechanisms of HAMP-mediated signaling in transmembrane receptors - the A291C mutant
Descriptor: UNCHARACTERIZED PROTEIN
Authors:Zeth, K, Ferris, H.U, Hulko, M, Lupas, A.N.
Deposit date:2010-12-07
Release date:2011-03-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Mechanisms of Hamp-Mediated Signaling in Transmembrane Receptors.
Structure, 19, 2011
5FTX
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BU of 5ftx by Molmil
Structure of surface layer protein SbsC, domains 4-9
Descriptor: CALCIUM ION, SURFACE LAYER PROTEIN, ZINC ION
Authors:Dordic, A, Pavkov-Keller, T, Eder, M, Egelseer, E.M, Davis, K, Mills, D, Sleytr, U.B, Kuehlbrandt, W, Vonck, J, Keller, W.
Deposit date:2016-01-18
Release date:2017-02-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Structure of Surface Layer Protein Sbsc
To be Published

225946

数据于2024-10-09公开中

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