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PDB: 51586 results

6X0N
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Bridging of double-strand DNA break activates PARP2/HPF1 to modify chromatin
Descriptor: DNA (167-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Halic, M, Bilokapic, S.
Deposit date:2020-05-16
Release date:2020-09-16
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (10 Å)
Cite:Bridging of DNA breaks activates PARP2-HPF1 to modify chromatin.
Nature, 585, 2020
5N0Z
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hPAD4 crystal complex with AFM-41a
Descriptor: 2-ethyl-~{N}-[(1~{S})-4-(2-fluoranylethanimidoylamino)-1-(4-methoxy-1-methyl-benzimidazol-2-yl)butyl]-3-oxidanylidene-1~{H}-isoindole-4-carboxamide, CALCIUM ION, Protein-arginine deiminase type-4, ...
Authors:Beaumont, E, Kerry, P, Thompson, P, Muth, A, Subramanian, V, Nagar, M, Srinath, H, Clancy, K, Parelkar, S.
Deposit date:2017-02-03
Release date:2017-05-24
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Development of a Selective Inhibitor of Protein Arginine Deiminase 2.
J. Med. Chem., 60, 2017
6WYL
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BU of 6wyl by Molmil
Cryo-EM structure of GltPh L152C-G351C mutant in the intermediate outward-facing state.
Descriptor: ASPARTIC ACID, Glutamate transporter homolog
Authors:Font, J, Chen, I, Sobti, M, Stewart, A.G, Ryan, R.M.
Deposit date:2020-05-13
Release date:2021-02-17
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Glutamate transporters have a chloride channel with two hydrophobic gates.
Nature, 591, 2021
5N1B
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hPAD4 crystal complex with AFM-14a
Descriptor: CALCIUM ION, Protein-arginine deiminase type-4, SULFATE ION, ...
Authors:Beaumont, E, Kerry, P, Thompson, P, Muth, A, Subramanian, V, Nagar, M, Srinath, H, Clancy, K, Parelkar, S.
Deposit date:2017-02-06
Release date:2017-05-24
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Development of a Selective Inhibitor of Protein Arginine Deiminase 2.
J. Med. Chem., 60, 2017
6WYK
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Cryo-EM structure of the GltPh L152C-G321C mutant in the intermediate chloride conducting state.
Descriptor: ASPARTIC ACID, Glutamate transporter homolog
Authors:Font, J, Chen, I, Sobti, M, Stewart, A.G, Ryan, R.M.
Deposit date:2020-05-13
Release date:2021-02-17
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Glutamate transporters have a chloride channel with two hydrophobic gates.
Nature, 591, 2021
5N4J
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human Fab fragment 10C3 against NHBA from Neisseria meningitidis
Descriptor: HEAVY CHAIN, LIGHT CHAIN
Authors:Maritan, M, Malito, E.
Deposit date:2017-02-10
Release date:2017-05-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.503 Å)
Cite:Crystal structures of human Fabs targeting the Bexsero meningococcal vaccine antigen NHBA.
Acta Crystallogr F Struct Biol Commun, 73, 2017
5NB8
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Structure of vWC domain from CCN3
Descriptor: GLYCEROL, IMIDAZOLE, Protein NOV homolog
Authors:Xu, E.-R, Hyvonen, M.
Deposit date:2017-03-01
Release date:2017-06-14
Last modified:2017-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural analyses of von Willebrand factor C domains of collagen 2A and CCN3 reveal an alternative mode of binding to bone morphogenetic protein-2.
J. Biol. Chem., 292, 2017
4TV8
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BU of 4tv8 by Molmil
Tubulin-Maytansine complex
Descriptor: (3beta,4beta,5beta,10beta,11E,13E)-maytansine, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Prota, A.E, Bargsten, K, Diaz, J.F, Marsh, M, Cuevas, C, Liniger, M, Neuhaus, C, Andreu, J.M, Altmann, K.H, Steinmetz, M.O.
Deposit date:2014-06-26
Release date:2014-08-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.103 Å)
Cite:A new tubulin-binding site and pharmacophore for microtubule-destabilizing anticancer drugs.
Proc.Natl.Acad.Sci.USA, 111, 2014
5NCQ
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Structure of the (SR) Ca2+-ATPase bound to a Tetrahydrocarbazole and TNP-ATP
Descriptor: (1~{S})-~{N}-[(4-bromophenyl)methyl]-7-(trifluoromethyloxy)-2,3,4,9-tetrahydro-1~{H}-carbazol-1-amine, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, POTASSIUM ION, ...
Authors:Bublitz, M, Kjellerup, L, O'Hanlon Cohrt, K, Gordon, S, Mortensen, A.L, Clausen, J.D, Pallin, D, Hansen, J.B, Brown, W.D, Fuglsang, A, Winther, A.-M.L.
Deposit date:2017-03-06
Release date:2018-01-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3 Å)
Cite:Tetrahydrocarbazoles are a novel class of potent P-type ATPase inhibitors with antifungal activity.
PLoS ONE, 13, 2018
5ND8
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BU of 5nd8 by Molmil
Hibernating ribosome from Staphylococcus aureus (Unrotated state)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Khusainov, I, Vicens, Q, Ayupov, R, Usachev, K, Myasnikov, A, Simonetti, A, Validov, S, Kieffer, B, Yusupova, G, Yusupov, M, Hashem, Y.
Deposit date:2017-03-07
Release date:2017-06-28
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structures and dynamics of hibernating ribosomes from Staphylococcus aureus mediated by intermolecular interactions of HPF.
EMBO J., 36, 2017
7QZX
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Human Carbonic Anhydrase II in complex with 4-oxo-N-(4-sulfamoylphenethyl)-1,3,4,6,7,11b-hexahydro-2H-pyrazino[2,1-a]isoquinoline-2-carboxamide
Descriptor: 4-oxo-N-(4-sulfamoylphenethyl)-1,3,4,6,7,11b-hexahydro-2H-pyrazino[2,1-a]isoquinoline-2-carboxamide, Carbonic anhydrase 2, GLYCEROL, ...
Authors:Angeli, A, Ferraroni, M.
Deposit date:2022-02-01
Release date:2023-02-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Development of Praziquantel sulphonamide derivatives as antischistosomal drugs.
J Enzyme Inhib Med Chem, 37, 2022
7R1X
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human Carbonic Anhydrase II in complex with 4-oxo-N-(4-sulfamoylphenethyl)-1,3,4,6,7,11b-hexahydro-2H-pyrazino[2,1-a]isoquinoline-2-carbothioamide
Descriptor: 4-oxo-N-(4-sulfamoylphenethyl)-1,3,4,6,7,11b-hexahydro-2H-pyrazino[2,1-a]isoquinoline-2-carbothioamide, Carbonic anhydrase 2, GLYCEROL, ...
Authors:Angeli, A, Ferraroni, M.
Deposit date:2022-02-03
Release date:2023-02-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Development of Praziquantel sulphonamide derivatives as antischistosomal drugs.
J Enzyme Inhib Med Chem, 37, 2022
7R2S
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BU of 7r2s by Molmil
Crystal structure of a flavodiiron protein D52K mutant from Escherichia coli pressurized with krypton gas
Descriptor: Anaerobic nitric oxide reductase flavorubredoxin, FE (III) ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Borges, P.T, Teixeira, M, Romao, C.V, Frazao, C.
Deposit date:2022-02-05
Release date:2023-02-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.194 Å)
Cite:Crystal structure of a flavodiiron protein D52K mutant from Escherichia coli pressurized with krypton gas
To Be Published
6WH0
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BU of 6wh0 by Molmil
Crystal structure of HyBcl-2-4 with HyBax BH3
Descriptor: Apoptosis regulator BAX, Maltodextrin-binding protein,Bcl-2-like 4, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Kvansakul, M, Hinds, M.G, Banjara, S.
Deposit date:2020-04-07
Release date:2021-03-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:The structural basis of Bcl-2 mediated cell death regulation in hydra.
Biochem.J., 477, 2020
7R2P
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BU of 7r2p by Molmil
Crystal structure of a flavodiiron protein D52K/S262Y mutant in the oxidized state from Escherichia coli
Descriptor: Anaerobic nitric oxide reductase flavorubredoxin, FE (III) ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Borges, P.T, Teixeira, M, Romao, C.V, Frazao, C.
Deposit date:2022-02-05
Release date:2023-02-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.538 Å)
Cite:Crystal structure of a flavodiiron protein D52K/S262Y mutant in the oxidized state from Escherichia coli
To Be Published
6WO6
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BU of 6wo6 by Molmil
Structure of RavA (lpp0008) E38A/K39A surface entropy reduction mutant
Descriptor: RavA
Authors:Cygler, M, Chung, I.Y.W.
Deposit date:2020-04-24
Release date:2021-03-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and functional study of Legionella pneumophila effector RavA.
Protein Sci., 30, 2021
7R1J
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BU of 7r1j by Molmil
Crystal structure of a flavodiiron protein S262Y mutant in the reduced state from Escherichia coli
Descriptor: Anaerobic nitric oxide reductase flavorubredoxin, FE (III) ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Borges, P.T, Teixeira, M, Romao, C.V, Frazao, C.
Deposit date:2022-02-03
Release date:2023-02-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Crystal structure of a flavodiiron protein S262Y mutant in the reduced state from Escherichia coli
To Be Published
7R0F
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BU of 7r0f by Molmil
Crystal structure of a flavodiiron protein D52K mutant in the oxidized state from Escherichia coli
Descriptor: Anaerobic nitric oxide reductase flavorubredoxin, FE (III) ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Borges, P.T, Teixeira, M, Romao, C.V, Frazao, C.
Deposit date:2022-02-02
Release date:2023-02-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.978 Å)
Cite:Crystal structure of a flavodiiron protein D52K mutant in the oxidized state from Escherichia coli
To Be Published
7R2O
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BU of 7r2o by Molmil
Crystal structure of a flavodiiron protein S262Y mutant in the oxidized state from Escherichia coli
Descriptor: Anaerobic nitric oxide reductase flavorubredoxin, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
Authors:Borges, P.T, Teixeira, M, Romao, C.V, Frazao, C.
Deposit date:2022-02-05
Release date:2023-02-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of a flavodiiron protein S262Y mutant in the oxidized state from Escherichia coli
To Be Published
7R2R
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BU of 7r2r by Molmil
Crystal structure of a flavodiiron protein D52K/S262Y mutant in the reduced state from Escherichia coli
Descriptor: Anaerobic nitric oxide reductase flavorubredoxin, FE (III) ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Borges, P.T, Teixeira, M, Romao, C.V, Frazao, C.
Deposit date:2022-02-05
Release date:2023-02-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.198 Å)
Cite:Crystal structure of a flavodiiron protein D52K/S262Y mutant in the reduced state from Escherichia coli
To Be Published
7R1H
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BU of 7r1h by Molmil
Crystal structure of a flavodiiron protein D52K mutant in the reduced state from Escherichia coli
Descriptor: Anaerobic nitric oxide reductase flavorubredoxin, FE (III) ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Borges, P.T, Teixeira, M, Romao, C.V, Frazao, C.
Deposit date:2022-02-03
Release date:2023-02-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal structure of a flavodiiron protein D52K mutant in the reduced state from Escherichia coli
To Be Published
5NDZ
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Crystal structure of a thermostabilised human protease-activated receptor-2 (PAR2) in complex with AZ3451 at 3.6 angstrom resolution
Descriptor: 2-(6-bromanyl-1,3-benzodioxol-5-yl)-~{N}-(4-cyanophenyl)-1-[(1~{S})-1-cyclohexylethyl]benzimidazole-5-carboxamide, Lysozyme,Proteinase-activated receptor 2,Soluble cytochrome b562,Proteinase-activated receptor 2, SODIUM ION
Authors:Cheng, R.K.Y, Fiez-Vandal, C, Schlenker, O, Edman, K, Aggeler, B, Brown, D.G, Brown, G, Cooke, R.M, Dumelin, C.E, Dore, A.S, Geschwindner, S, Grebner, C, Hermansson, N.-O, Jazayeri, A, Johansson, P, Leong, L, Prihandoko, R, Rappas, M, Soutter, H, Snijder, A, Sundstrom, L, Tehan, B, Thornton, P, Troast, D, Wiggin, G, Zhukov, A, Marshall, F.H, Dekker, N.
Deposit date:2017-03-09
Release date:2017-05-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural insight into allosteric modulation of protease-activated receptor 2.
Nature, 545, 2017
5NIS
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BU of 5nis by Molmil
Neutral trehalase Nth1 from Saccharomyces cerevisiae
Descriptor: Neutral trehalase
Authors:Alblova, M, Smidova, A, Obsilova, V, Obsil, T.
Deposit date:2017-03-27
Release date:2017-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.155 Å)
Cite:Molecular basis of the 14-3-3 protein-dependent activation of yeast neutral trehalase Nth1.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5NF3
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BU of 5nf3 by Molmil
The fimbrial shaft protein Mfa1 from Porphyromonas gingivalis-C-terminal deletion
Descriptor: ACETATE ION, CALCIUM ION, Minor fimbrium subunit Mfa1
Authors:Hall, M, Hasegawa, Y, Persson, K, Yoshimura, F.
Deposit date:2017-03-13
Release date:2018-02-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural and functional characterization of shaft, anchor, and tip proteins of the Mfa1 fimbria from the periodontal pathogen Porphyromonas gingivalis.
Sci Rep, 8, 2018
5NJA
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BU of 5nja by Molmil
E. coli Microcin-processing metalloprotease TldD/E with angiotensin analogue bound
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, HIS-PRO-PHE, ...
Authors:Ghilarov, D, Serebryakova, M, Stevenson, C.E.M, Hearnshaw, S.J, Volkov, D, Maxwell, A, Lawson, D.M, Severinov, K.
Deposit date:2017-03-28
Release date:2017-10-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Origins of Specificity in the Microcin-Processing Protease TldD/E.
Structure, 25, 2017

224004

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