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PDB: 52230 results

1AAZ
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BU of 1aaz by Molmil
THE STRUCTURE OF OXIDIZED BACTERIOPHAGE T4 GLUTAREDOXIN (THIOREDOXIN)
Descriptor: CADMIUM ION, GLUTAREDOXIN
Authors:Eklund, H, Ingelman, M, Soderberg, B.-O, Uhlin, T, Nordlund, P, Nikkola, M, Sonnerstam, U, Joelson, T, Petratos, K.
Deposit date:1992-04-24
Release date:1993-10-31
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of oxidized bacteriophage T4 glutaredoxin (thioredoxin). Refinement of native and mutant proteins.
J.Mol.Biol., 228, 1992
1R2W
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BU of 1r2w by Molmil
Coordinates of L11 with 58nts of 23S rRNA fitted into the cryo-EM map of the 70S ribosome
Descriptor: 50S ribosomal protein L11, 58nts of 23S rRNA
Authors:Valle, M, Zavialov, A, Li, W, Stagg, S.M, Sengupta, J, Nielsen, R.C, Nissen, P, Harvey, S.C, Ehrenberg, M, Frank, J.
Deposit date:2003-09-30
Release date:2003-11-04
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Incorporation of aminoacyl-tRNA into the ribosome as seen by cryo-electron Microscopy
Nat.Struct.Biol., 10, 2003
4OMX
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BU of 4omx by Molmil
Crystal structure of goat beta-lactoglobulin (trigonal form)
Descriptor: FORMAMIDE, SULFATE ION, UREA, ...
Authors:Loch, J.I, Swiatek, S, Czub, M, Ludwikowska, M, Lewinski, K.
Deposit date:2014-01-27
Release date:2014-11-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Conformational variability of goat beta-lactoglobulin: Crystallographic and thermodynamic studies.
Int.J.Biol.Macromol., 72C, 2014
2W10
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BU of 2w10 by Molmil
Mona SH3C in complex
Descriptor: GRB2-RELATED ADAPTOR PROTEIN 2, PHOSPHATE ION, TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 23
Authors:Harkiolaki, M, Feller, S.M.
Deposit date:2008-10-13
Release date:2009-05-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Distinct Binding Modes of Two Epitopes in Gab2 that Interact with the Sh3C Domain of Grb2.
Structure, 17, 2009
4I2O
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BU of 4i2o by Molmil
The Structure of FixK2 from Bradyrhizobium japonicum
Descriptor: FixK2 protein, Promoter of fixK2 direct target, fixN, ...
Authors:Bonnet, M, Kurz, M, Mesa, S, Briand, C, Hennecke, H, Gruetter, M.G.
Deposit date:2012-11-22
Release date:2013-04-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:The Structure of Bradyrhizobium japonicum Transcription Factor FixK2 Unveils Sites of DNA Binding and Oxidation.
J.Biol.Chem., 288, 2013
2WEW
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Crystal structure of human apoM in complex with myristic acid
Descriptor: 1,2-ETHANEDIOL, APOLIPOPROTEIN M, MYRISTIC ACID
Authors:Sevvana, M, Ahnstrom, J, Egerer-Sieber, C, Dahlback, B, Muller, Y.A.
Deposit date:2009-04-02
Release date:2009-09-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Serendipitous Fatty Acid Binding Reveals the Structural Determinants for Ligand Recognition in Apolipoprotein M.
J.Mol.Biol., 393, 2009
1RM6
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BU of 1rm6 by Molmil
Structure of 4-hydroxybenzoyl-CoA reductase from Thauera aromatica
Descriptor: (MOLYBDOPTERIN-CYTOSINE DINUCLEOTIDE-S,S)-DIOXO-AQUA-MOLYBDENUM(V), 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 4-hydroxybenzoyl-CoA reductase alpha subunit, ...
Authors:Unciuleac, M, Warkentin, E, Page, C.C, Dutton, P.L, Boll, M, Ermler, U.
Deposit date:2003-11-27
Release date:2004-12-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of a Xanthine Oxidase-Related 4-Hydroxybenzoyl-CoA Reductase with an Additional [4Fe-4S] Cluster and an Inverted Electron Flow
Structure, 12, 2004
2VSZ
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BU of 2vsz by Molmil
Crystal Structure of the ELMO1 PH domain
Descriptor: ENGULFMENT AND CELL MOTILITY PROTEIN 1
Authors:Komander, D, Patel, M, Barford, D, Cote, J.-F.
Deposit date:2008-05-01
Release date:2009-03-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:An Alpha-Helical Extension of the Elmo1 Pleckstrin Homology Domain Mediates Direct Interaction to Dock180 and is Critical in Rac Signaling.
Molecular Biology of the Cell, 19, 2008
4P0A
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BU of 4p0a by Molmil
Crystal structure of HOIP PUB domain in complex with p97 PIM
Descriptor: E3 ubiquitin-protein ligase RNF31, Transitional endoplasmic reticulum ATPase
Authors:Akutsu, M, Schaeffer, V, Olma, M.H, Gomes, L.C, Kawasaki, M, Dikic, I.
Deposit date:2014-02-20
Release date:2014-05-07
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.3001 Å)
Cite:Binding of OTULIN to the PUB domain of HOIP controls NF-kappa B signaling.
Mol.Cell, 54, 2014
1B5X
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BU of 1b5x by Molmil
Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and x-ray analysis of six ser->ala mutants
Descriptor: PROTEIN (LYSOZYME), SODIUM ION
Authors:Takano, K, Yamagata, Y, Kubota, M, Funahashi, J, Fujii, S, Yutani, K.
Deposit date:1999-01-11
Release date:1999-01-20
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Contribution of hydrogen bonds to the conformational stability of human lysozyme: calorimetry and X-ray analysis of six Ser --> Ala mutants.
Biochemistry, 38, 1999
1B75
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BU of 1b75 by Molmil
SOLUTION STRUCTURE OF RIBOSOMAL PROTEIN L25 FROM ESCHERICHIA COLI
Descriptor: PROTEIN (50S RIBOSOMAL PROTEIN L25)
Authors:Stoldt, M, Woehnert, J, Goerlach, M, Brown, L.R.
Deposit date:1999-01-27
Release date:2000-01-26
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The NMR structure of Escherichia coli ribosomal protein L25 shows homology to general stress proteins and glutaminyl-tRNA synthetases.
EMBO J., 17, 1998
2KB5
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BU of 2kb5 by Molmil
Solution NMR Structure of Eosinophil Cationic Protein/RNase 3
Descriptor: Eosinophil cationic protein
Authors:Rico, M, Bruix, M, Laurents, D.V, Santoro, J, Jimenez, M, Boix, E, Moussaoui, M, Nogues, M.
Deposit date:2008-11-20
Release date:2009-06-23
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:The (1)H, (13)C, (15)N resonance assignment, solution structure, and residue level stability of eosinophil cationic protein/RNase 3 determined by NMR spectroscopy
Biopolymers, 91, 2009
1ROA
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BU of 1roa by Molmil
Structure of human cystatin D
Descriptor: Cystatin D
Authors:Alvarez-Fernandez, M, Liang, Y.H, Abrahamson, M, Su, X.D.
Deposit date:2003-12-01
Release date:2004-05-18
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of human cystatin D, a cysteine peptidase inhibitor with restricted inhibition profile.
J.Biol.Chem., 280, 2005
1CB8
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BU of 1cb8 by Molmil
CHONDROITINASE AC LYASE FROM FLAVOBACTERIUM HEPARINUM
Descriptor: CALCIUM ION, GLYCEROL, PROTEIN (CHONDROITINASE AC), ...
Authors:Fethiere, J, Eggimann, B, Cygler, M.
Deposit date:1999-03-02
Release date:1999-05-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of chondroitin AC lyase, a representative of a family of glycosaminoglycan degrading enzymes.
J.Mol.Biol., 288, 1999
1RUU
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BU of 1ruu by Molmil
Solution structure of porcine peptide YY (pPYY) bound to DPC micelles
Descriptor: Peptide YY
Authors:Lerch, M, Mayrhofer, M, Zerbe, O.
Deposit date:2003-12-12
Release date:2004-06-08
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Structural similarities of micelle-bound peptide YY (PYY) and neuropeptide Y (NPY) are related to their affinity profiles at the Y receptors.
J.Mol.Biol., 339, 2004
1RWA
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BU of 1rwa by Molmil
Crystal structure of Arthrobacter aurescens chondroitin AC lyase
Descriptor: GLYCEROL, MERCURY (II) ION, chondroitin AC lyase
Authors:Lunin, V.V, Li, Y, Miyazono, H, Kyogashima, M, Bell, A.W, Cygler, M.
Deposit date:2003-12-16
Release date:2004-04-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:High-resolution crystal structure of Arthrobacter aurescens chondroitin AC lyase: an enzyme-substrate complex defines the catalytic mechanism
J.Mol.Biol., 337, 2004
4LMO
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BU of 4lmo by Molmil
Structure of a vertebrate RNA binding domain of telomerase (TRBD)
Descriptor: Telomerase reverse transcriptase
Authors:Harkisheimer, M, Mason, M, Shuvaeva, E, Skordalakes, E.
Deposit date:2013-07-10
Release date:2013-10-09
Last modified:2013-10-30
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:A Motif in the Vertebrate Telomerase N-Terminal Linker of TERT Contributes to RNA Binding and Telomerase Activity and Processivity.
Structure, 21, 2013
1THG
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BU of 1thg by Molmil
1.8 ANGSTROMS REFINED STRUCTURE OF THE LIPASE FROM GEOTRICHUM CANDIDUM
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Schrag, J.D, Cygler, M.
Deposit date:1992-07-28
Release date:1993-10-31
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:1.8 A refined structure of the lipase from Geotrichum candidum.
J.Mol.Biol., 230, 1993
4QCJ
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BU of 4qcj by Molmil
Crystal Structure of OdhI from Corynebacterium glutamicum
Descriptor: Oxoglutarate dehydrogenase inhibitor
Authors:Labahn, J, Raasch, K, Eggeling, L, Bocola, M, Leitner, A, Bott, M.
Deposit date:2014-05-12
Release date:2014-07-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Interaction of 2-oxoglutarate dehydrogenase OdhA with its inhibitor OdhI in Corynebacterium glutamicum: Mutants and a model.
J.Biotechnol., 191, 2014
1BZA
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BU of 1bza by Molmil
BETA-LACTAMASE TOHO-1 FROM ESCHERICHIA COLI TUH12191
Descriptor: BETA-LACTAMASE, SULFATE ION
Authors:Ibuka, A, Taguchi, A, Ishiguro, M, Fushinobu, S, Ishii, Y, Kamitori, S, Okuyama, K, Yamaguchi, K, Konno, M, Matsuzawa, H.
Deposit date:1998-10-28
Release date:1999-04-27
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the E166A mutant of extended-spectrum beta-lactamase Toho-1 at 1.8 A resolution.
J.Mol.Biol., 285, 1999
1BXL
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BU of 1bxl by Molmil
STRUCTURE OF BCL-XL/BAK PEPTIDE COMPLEX, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: BAK PEPTIDE, BCL-XL
Authors:Sattler, M, Liang, H, Nettesheim, D, Meadows, R.P, Harlan, J.E, Eberstadt, M, Yoon, H, Shuker, S.B, Chang, B.S, Minn, A.J, Thompson, C.B, Fesik, S.W.
Deposit date:1996-10-16
Release date:1997-10-29
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of Bcl-xL-Bak peptide complex: recognition between regulators of apoptosis.
Science, 275, 1997
1C6S
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BU of 1c6s by Molmil
THE SOLUTION STRUCTURE OF CYTOCHROME C6 FROM THE THERMOPHILIC CYANOBACTERIUM SYNECHOCOCCUS ELONGATUS, NMR, 20 STRUCTURES
Descriptor: CYTOCHROME C6, HEME C
Authors:Roesch, P, Beissinger, M, Sticht, H, Sutter, M, Ejchart, A, Haehnel, W.
Deposit date:1997-03-31
Release date:1998-04-08
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Solution structure of cytochrome c6 from the thermophilic cyanobacterium Synechococcus elongatus.
EMBO J., 17, 1998
4LMQ
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Development and Preclinical Characterization of a Humanized Antibody Targeting CXCL12
Descriptor: Stromal cell-derived factor 1, hu30D8 Fab heavy chain, hu30D8 Fab light chain
Authors:Zhong, Z, Wang, J, Li, B, Xiang, H, Ultsch, M, Coons, M, Wong, T, Chiang, N.Y, Clark, S, Clark, R, Quintana, L, Gribling, P, Suto, E, Barck, K, Corpuz, R, Yao, J, Takkar, R, Lee, W.P, Damico-Beyer, L.A, Carano, R.D, Adams, C, Kelley, R.F, Wang, W, Ferrara, N.
Deposit date:2013-07-10
Release date:2013-08-14
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.773 Å)
Cite:Development and Preclinical Characterization of a Humanized Antibody Targeting CXCL12.
Clin.Cancer Res., 19, 2013
1TJP
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BU of 1tjp by Molmil
Crystal Structure Of Wild-Type Tryptophan Synthase Complexed With 1-[(2-hydroxylphenyl)amino]3-glycerolphosphate
Descriptor: 1-[(2-HYDROXYLPHENYL)AMINO]3-GLYCEROLPHOSPHATE, PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, ...
Authors:Kulik, V, Hartmann, E, Weyand, M, Frey, M, Gierl, A, Niks, D, Dunn, M.F, Schlichting, I.
Deposit date:2004-06-07
Release date:2005-12-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:On the structural basis of the catalytic mechanism and the regulation of the alpha subunit of tryptophan synthase from Salmonella typhimurium and BX1 from maize, two evolutionarily related enzymes.
J.Mol.Biol., 352, 2005
1SVZ
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Crystal structure of the single-chain Fv fragment 1696 in complex with the epitope peptide corresponding to N-terminus of HIV-2 protease
Descriptor: epitope peptide corresponding to N-terminus of HIV-2 protease, single-chain Fv fragment 1696
Authors:Rezacova, P, Brynda, J, Lescar, J, Bentley, G.A, Fabry, M, Horejsi, M, Sedlacek, J.
Deposit date:2004-03-30
Release date:2005-03-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structure of a cross-reaction complex between an anti-HIV-1 protease antibody and an HIV-2 protease peptide
J.Struct.Biol., 149, 2005

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