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PDB: 51938 results

7ZMT
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BU of 7zmt by Molmil
Crystal structure of human RECQL5 helicase APO form in complex with engineered nanobody (Gluebody) G5-006
Descriptor: ATP-dependent DNA helicase Q5, Gluebody G5-006, ZINC ION
Authors:Ye, M, Makola, M, Newman, J.A, Fairhead, M, MacLean, E, Krojer, T, Aitkenhead, H, Bountra, C, Gileadi, O, von Delft, F.
Deposit date:2022-04-19
Release date:2022-06-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Gluebodies improve crystal reliability and diversity through transferable nanobody mutations that introduce constitutive crystal contacts
To Be Published
6YDB
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BU of 6ydb by Molmil
Human wtSTING in complex with 2',2'-difluoro-3',3'-c-di-GMP
Descriptor: 2-azanyl-9-[(1~{R},6~{R},8~{R},9~{R},10~{R},15~{R},17~{R},18~{R})-17-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-9,18-bis(fluoranyl)-3,12-bis(oxidanyl)-3,12-bis(oxidanylidene)-2,4,7,11,13,16-hexaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.3.0.0^{6,10}]octadecan-8-yl]-1~{H}-purin-6-one, Stimulator of interferon protein
Authors:Boura, E, Smola, M.
Deposit date:2020-03-20
Release date:2021-03-31
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:Ligand Strain and Its Conformational Complexity Is a Major Factor in the Binding of Cyclic Dinucleotides to STING Protein.
Angew.Chem.Int.Ed.Engl., 60, 2021
7ZMV
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BU of 7zmv by Molmil
Crystal structure of human RECQL5 helicase APO form in complex with engineered nanobody (Gluebody) G5-006
Descriptor: ATP-dependent DNA helicase Q5, Gluebody G5-006, SULFATE ION, ...
Authors:Ye, M, Makola, M, Newman, J.A, Fairhead, M, MacLean, E, Krojer, T, Aitkenhead, H, Bountra, C, Gileadi, O, von Delft, F.
Deposit date:2022-04-19
Release date:2022-06-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Gluebodies improve crystal reliability and diversity through transferable nanobody mutations that introduce constitutive crystal contacts
To Be Published
6YDZ
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BU of 6ydz by Molmil
Human wtSTING in complex with 3',3'-cGAMP
Descriptor: 2-amino-9-[(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one, Stimulator of interferon protein
Authors:Boura, E, Smola, M.
Deposit date:2020-03-23
Release date:2021-03-31
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Ligand Strain and Its Conformational Complexity Is a Major Factor in the Binding of Cyclic Dinucleotides to STING Protein.
Angew.Chem.Int.Ed.Engl., 60, 2021
7ZMP
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BU of 7zmp by Molmil
Crystal structure of human RECQL5 helicase APO form in complex with engineered nanobody (Gluebody) G3-055
Descriptor: ATP-dependent DNA helicase Q5, Gluebody G3-055, ZINC ION
Authors:Ye, M, Makola, M, Newman, J.A, Fairhead, M, MacLean, E, Krojer, T, Aitkenhead, H, Bountra, C, Gileadi, O, von Delft, F.
Deposit date:2022-04-19
Release date:2022-06-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.626 Å)
Cite:Gluebodies improve crystal reliability and diversity through transferable nanobody mutations that introduce constitutive crystal contacts
To Be Published
7ZMR
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BU of 7zmr by Molmil
Crystal structure of human RECQL5 helicase APO form in complex with engineered nanobody (Gluebody) G2*-011
Descriptor: ATP-dependent DNA helicase Q5, Gluebody G2*-011, SULFATE ION, ...
Authors:Ye, M, Makola, M, Newman, J.A, Fairhead, M, MacLean, E, Krojer, T, Aitkenhead, H, Bountra, C, Gileadi, O, von Delft, F.
Deposit date:2022-04-19
Release date:2022-06-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Gluebodies improve crystal reliability and diversity through transferable nanobody mutations that introduce constitutive crystal contacts
To Be Published
8TTW
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BU of 8ttw by Molmil
Cryo-EM structure of BG505 SOSIP.664 HIV-1 Env trimer in complex with temsavir, 8ANC195, and 10-1074
Descriptor: 1-[4-(benzenecarbonyl)piperazin-1-yl]-2-[4-methoxy-7-(3-methyl-1H-1,2,4-triazol-1-yl)-1H-pyrrolo[2,3-c]pyridin-3-yl]ethane-1,2-dione, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Tolbert, W.D, Pozharski, E, Pazgier, M.
Deposit date:2023-08-15
Release date:2023-11-08
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Structure-function analyses reveal key molecular determinants of HIV-1 CRF01_AE resistance to the entry inhibitor temsavir.
Nat Commun, 14, 2023
6YEA
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BU of 6yea by Molmil
Human wtSTING in complex with 2',2'-difluoro-3',3'-cGAMP
Descriptor: 2',2'-difluoro-3',3'-cGAMP, Stimulator of interferon protein
Authors:Boura, E, Smola, M.
Deposit date:2020-03-24
Release date:2021-03-31
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.805 Å)
Cite:Ligand Strain and Its Conformational Complexity Is a Major Factor in the Binding of Cyclic Dinucleotides to STING Protein.
Angew.Chem.Int.Ed.Engl., 60, 2021
7ZMQ
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BU of 7zmq by Molmil
Crystal structure of human RECQL5 helicase APO form in complex with engineered nanobody (Gluebody) G2*-006
Descriptor: ATP-dependent DNA helicase Q5, Gluebody G2*-006, SULFATE ION, ...
Authors:Ye, M, Makola, M, Newman, J.A, Fairhead, M, MacLean, E, Krojer, T, Aitkenhead, H, Bountra, C, Gileadi, O, von Delft, F.
Deposit date:2022-04-19
Release date:2022-06-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Gluebodies improve crystal reliability and diversity through transferable nanobody mutations that introduce constitutive crystal contacts
To Be Published
7ZML
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BU of 7zml by Molmil
Crystal structure of human RECQL5 helicase APO form in complex with engineered nanobody (Gluebody) G1-001
Descriptor: ATP-dependent DNA helicase Q5, Gluebody G1-001, SULFATE ION, ...
Authors:Ye, M, Makola, M, Newman, J.A, Fairhead, M, MacLean, E, Krojer, T, Aitkenhead, H, Bountra, C, Gileadi, O, von Delft, F.
Deposit date:2022-04-19
Release date:2022-06-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Gluebodies improve crystal reliability and diversity through transferable nanobody mutations that introduce constitutive crystal contacts
To Be Published
7ZMM
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BU of 7zmm by Molmil
Crystal structure of human RECQL5 helicase APO form in complex with engineered nanobody (Gluebody) G2-001
Descriptor: ATP-dependent DNA helicase Q5, Gluebody G2-001, ZINC ION
Authors:Ye, M, Makola, M, Newman, J.A, Fairhead, M, MacLean, E, Krojer, T, Aitkenhead, H, Bountra, C, Gileadi, O, von Delft, F.
Deposit date:2022-04-19
Release date:2022-06-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Gluebodies improve crystal reliability and diversity through transferable nanobody mutations that introduce constitutive crystal contacts
To Be Published
7ZMN
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BU of 7zmn by Molmil
Crystal structure of human RECQL5 helicase APO form in complex with engineered nanobody (Gluebody) G3-048
Descriptor: ATP-dependent DNA helicase Q5, Gluebody G3-048, SULFATE ION, ...
Authors:Ye, M, Makola, M, Newman, J.A, Fairhead, M, MacLean, E, Krojer, T, Aitkenhead, H, Bountra, C, Gileadi, O, von Delft, F.
Deposit date:2022-04-19
Release date:2022-06-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Gluebodies improve crystal reliability and diversity through transferable nanobody mutations that introduce constitutive crystal contacts
To Be Published
7QIO
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BU of 7qio by Molmil
Homology model of myosin neck domain in skeletal sarcomere
Descriptor: Myosin light chain 1/3, skeletal muscle isoform, Myosin regulatory light chain 2, ...
Authors:Wang, Z, Grange, M, Pospich, S, Wagner, T, Kho, A.L, Gautel, M, Raunser, S.
Deposit date:2021-12-15
Release date:2022-02-16
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Structures from intact myofibrils reveal mechanism of thin filament regulation through nebulin.
Science, 375, 2022
2VF3
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BU of 2vf3 by Molmil
Aquifex aeolicus IspE in complex with ligand
Descriptor: 4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRITOL KINASE, BROMIDE ION, CHLORIDE ION, ...
Authors:Alphey, M.S, Hunter, W.N.
Deposit date:2007-10-30
Release date:2008-11-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Inhibitors of the Kinase Ispe: Structure-Activity Relationships and Co-Crystal Structure Analysis.
Org.Biomol.Chem., 6, 2008
3E1Z
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BU of 3e1z by Molmil
Crystal structure of the parasite protesase inhibitor chagasin in complex with papain
Descriptor: ACETIC ACID, Chagasin, FORMIC ACID, ...
Authors:Redzynia, I, Bujacz, G, Bujacz, A, Ljunggren, A, Abrahamson, M, Jaskolski, M.
Deposit date:2008-08-05
Release date:2009-01-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal structure of the parasite inhibitor chagasin in complex with papain allows identification of structural requirements for broad reactivity and specificity determinants for target proteases.
Febs J., 276, 2009
3DL3
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BU of 3dl3 by Molmil
Crystal structure of the tellurite resistance protein TehB. Northeast Structural Genomics Consortium target VfR98 .
Descriptor: Tellurite resistance protein B
Authors:Kuzin, A.P, Su, M, Seetharaman, J, Wang, D, Mao, L, Maglaqui, M, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-06-26
Release date:2008-08-26
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the tellurite resistance protein TehB. Northeast Structural Genomics Consortium target VfR98.
To be Published
7QIN
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BU of 7qin by Molmil
In situ structure of actomyosin complex in skeletal sarcomere
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Wang, Z, Grange, M, Pospich, S, Wagner, T, Kho, A.L, Gautel, M, Raunser, S.
Deposit date:2021-12-15
Release date:2022-02-16
Last modified:2022-03-02
Method:ELECTRON MICROSCOPY (6.6 Å)
Cite:Structures from intact myofibrils reveal mechanism of thin filament regulation through nebulin.
Science, 375, 2022
3DIB
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BU of 3dib by Molmil
Crystal structure of bovine pancreatic ribonuclease A variant (I106A)
Descriptor: CHLORIDE ION, Ribonuclease pancreatic, SULFATE ION
Authors:Kurpiewska, K, Font, J, Ribo, M, Vilanova, M, Lewinski, K.
Deposit date:2008-06-20
Release date:2008-07-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:X-ray crystallographic studies of RNase A variants engineered at the most destabilizing positions of the main hydrophobic core: further insight into protein stability
Proteins, 77, 2009
3DM3
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BU of 3dm3 by Molmil
Crystal structure of a domain of a Replication factor A protein, from Methanocaldococcus jannaschii. NorthEast Structural Genomics target MjR118E
Descriptor: Replication factor A, SODIUM ION
Authors:Seetharaman, J, Su, M, Maglaqui, M, Janjua, H, Ciccosanti, C, Xiao, R, Nair, R, Everett, J.K, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-06-30
Release date:2008-08-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of a domain of a Replication factor A protein, from Methanocaldococcus jannaschii. NorthEast Structural Genomics target MjR118E
To be Published
5KSU
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BU of 5ksu by Molmil
Crystal structure of HLA-DQ2.5-CLIP1 at 2.73 resolution
Descriptor: HLA class II histocompatibility antigen gamma chain, HLA class II histocompatibility antigen, DQ alpha 1 chain, ...
Authors:Nguyen, T.-B, Jayaraman, P, Bergseng, E, Madhusudhan, M.S, Kim, C.-Y, Sollid, L.M.
Deposit date:2016-07-10
Release date:2017-04-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Unraveling the structural basis for the unusually rich association of human leukocyte antigen DQ2.5 with class-II-associated invariant chain peptides.
J. Biol. Chem., 292, 2017
5KUG
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BU of 5kug by Molmil
Human mitochondrial calcium uniporter (residues 72-189) crystal structure with lithium
Descriptor: Calcium uniporter protein, mitochondrial
Authors:Mok, M.C.Y, Lee, S.K, Junop, M.S, Stathopulos, P.B.
Deposit date:2016-07-13
Release date:2016-09-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Insights into Mitochondrial Calcium Uniporter Regulation by Divalent Cations.
Cell Chem Biol, 23, 2016
6Y0D
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BU of 6y0d by Molmil
Crystal structure of Trypanosoma cruzi antigen TcSMP11.90
Descriptor: Surface membrane protein
Authors:Di Pisa, F, Gourlay, L.J, Bolognesi, M, De Benedetti, S.
Deposit date:2020-02-07
Release date:2022-02-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Elucidating the 3D Structure of a Surface Membrane Antigen from Trypanosoma cruzi as a Serodiagnostic Biomarker of Chagas Disease.
Vaccines (Basel), 10, 2022
6HB4
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BU of 6hb4 by Molmil
TFAM in Complex with Site-Y
Descriptor: DNA (5'*CP*TP*GP*TP*GP*CP*AP*GP*AP*CP*AP*TP*TP*CP*AP*AP*TP*TP*GP*TP*TP*A)-3'), DNA (5'-D(*TP*AP*AP*CP*AP*AP*TP*TP*GP*AP*AP*TP*GP*TP*CP*TP*GP*CP*AP*CP*AP*G)-3'), GLYCEROL, ...
Authors:Cuppari, A, Fernandez-Millan, P, Rubio-Cosials, A, Tarres-Sole, A, Lyonnais, S, Sola, M.
Deposit date:2018-08-09
Release date:2019-06-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:DNA specificities modulate the binding of human transcription factor A to mitochondrial DNA control region.
Nucleic Acids Res., 47, 2019
6YQ5
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BU of 6yq5 by Molmil
Hybrid structure of the SPP1 tail tube by solid-state NMR and cryo EM - NMR Ensemble
Descriptor: Tail tube protein gp17.1*
Authors:Zinke, M, Sachowsky, K.A.A, Zinn-Justin, S, Ravelli, R, Schroder, G.F, Habeck, M, Lange, A.
Deposit date:2020-04-16
Release date:2020-10-14
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4 Å), SOLID-STATE NMR
Cite:Architecture of the flexible tail tube of bacteriophage SPP1.
Nat Commun, 11, 2020
7PAY
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BU of 7pay by Molmil
Structure of the human heterotetrameric cis-prenyltransferase complex in complex with magnesium and GGsPP
Descriptor: Dehydrodolichyl diphosphate synthase complex subunit DHDDS, Dehydrodolichyl diphosphate synthase complex subunit NUS1, MAGNESIUM ION, ...
Authors:Giladi, M, Lisnyansky Bar-El, M, Haitin, Y.
Deposit date:2021-07-30
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for long-chain isoprenoid synthesis by cis -prenyltransferases.
Sci Adv, 8, 2022

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