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PDB: 52259 results

2XYS
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Crystal structure of Aplysia californica AChBP in complex with strychnine
Descriptor: SOLUBLE ACETYLCHOLINE RECEPTOR, STRYCHNINE
Authors:Brams, M, Pandya, A, Kuzmin, D, van Elk, R, Krijnen, L, Yakel, J.L, Tsetlin, V, Smit, A.B, Ulens, C.
Deposit date:2010-11-19
Release date:2011-03-23
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.909 Å)
Cite:A Structural and Mutagenic Blueprint for Molecular Recognition of Strychnine and D-Tubocurarine by Different Cys-Loop Receptors.
Plos Biol., 9, 2011
3NJG
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K98A mutant of SO1698 protein, an aspartic peptidase from Shewanella oneidensis.
Descriptor: Peptidase
Authors:Osipiuk, J, Mulligan, R, Bargassa, M, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-06-17
Release date:2010-07-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Characterization of member of DUF1888 protein family, self-cleaving and self-assembling endopeptidase.
J.Biol.Chem., 287, 2012
246D
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STRUCTURE OF THE PURINE-PYRIMIDINE ALTERNATING RNA DOUBLE HELIX, R(GUAUAUA)D(C) , WITH A 3'-TERMINAL DEOXY RESIDUE
Descriptor: DNA/RNA (5'-R(*GP*UP*AP*UP*AP*UP*AP*)-D(*C)-3'), SODIUM ION
Authors:Wahl, M.C, Ban, C, Sekharudu, C, Ramakrishnan, B, Sundaralingam, M.
Deposit date:1996-01-25
Release date:1996-08-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the purine-pyrimidine alternating RNA double helix, r(GUAUAUA)d(C), with a 3'-terminal deoxy residue.
Acta Crystallogr.,Sect.D, 52, 1996
2XSV
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Crystal structure of L69A mutant Acinetobacter radioresistens catechol 1,2 dioxygenase
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOINOSITOL, CATECHOL 1,2 DIOXYGENASE, FE (III) ION
Authors:Micalella, C, Martignon, S, Bruno, S, Rizzi, M.
Deposit date:2010-09-30
Release date:2010-10-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-Ray Crystallography, Mass Spectrometry and Single Crystal Microspectrophotometry: A Multidisciplinary Characterization of Catechol 1,2 Dioxygenase.
Biochim.Biophys.Acta, 1814, 2011
290D
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CRYSTAL STRUCTURES OF OLIGODEOXYRIBONUCLEOTIDES CONTAINING 6'-ALPHA-METHYL AND 6'-ALPHA-HYDROXY CARBOCYCLIC THYMIDINES
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*(T32)P*(T32)P*CP*GP*CP*G)-3')
Authors:Portmann, S, Altmann, K.-H, Reynes, N, Egli, M.
Deposit date:1996-10-10
Release date:1996-11-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structures of Oligodeoxyribonucleotides Containing 6'-alpha-Methyl and 6'-alpha-Hydroxy Carbocyclic Thymidines
J.Am.Chem.Soc., 119, 1997
3NJK
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D116A mutant of SO1698 protein, an aspartic peptidase from Shewanella oneidensis, at pH5.5
Descriptor: GLYCEROL, Peptidase
Authors:Osipiuk, J, Mulligan, R, Bargassa, M, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-06-17
Release date:2010-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Characterization of member of DUF1888 protein family, self-cleaving and self-assembling endopeptidase.
J.Biol.Chem., 287, 2012
2Y0M
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CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN DOSAGE COMPENSATION FACTORS MSL1 AND MOF
Descriptor: ACETYL COENZYME *A, MALE-SPECIFIC LETHAL 1 HOMOLOG, PROBABLE HISTONE ACETYLTRANSFERASE MYST1, ...
Authors:Kadlec, J, Hallacli, E, Lipp, M, Holz, H, Sanchez Weatherby, J, Cusack, S, Akhtar, A.
Deposit date:2010-12-03
Release date:2011-01-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Basis for Mof and Msl3 Recruitment Into the Dosage Compensation Complex by Msl1.
Nat.Struct.Mol.Biol., 18, 2011
4I6K
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Crystal structure of probable 2-PYRONE-4,6-DICARBOXYLIC ACID HYDROLASE ABAYE1769 (TARGET EFI-505029) from Acinetobacter baumannii with citric acid bound
Descriptor: Amidohydrolase family protein, CITRIC ACID
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Al Obaidi, N.F, Stead, M, Love, J, Gerlt, J.A, Raushel, F.M, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-11-29
Release date:2012-12-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.276 Å)
Cite:CRYSTAL STRUCTURE OF PROBABLE 2-PYRONE-4,6-DICARBOXYLIC ACID HYDROLASE (TARGET EFI-505029) FROM Acinetobacter baumannii
To be Published
2A08
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Structure of the yeast YHH6 SH3 domain
Descriptor: Hypothetical 41.8 kDa protein in SPO13-ARG4 intergenic region
Authors:Kursula, P, Kursula, I, Song, Y.H, Lehmann, F, Zou, P, Wilmanns, M.
Deposit date:2005-06-16
Release date:2006-06-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:3-D proteome of yeast SH3 domains
To be Published
2A0P
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Crystal structure of RNA oligomer containing 4'-thioribose
Descriptor: 5'-R(*CP*CP*(S4C)P*CP*GP*GP*GP*G)-3'
Authors:Haeberli, P, Berger, I, Pallan, P.S, Egli, M.
Deposit date:2005-06-16
Release date:2005-08-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Syntheses of 4'-thioribonucleosides and thermodynamic stability and crystal structure of RNA oligomers with incorporated 4'-thiocytosine
Nucleic Acids Res., 33, 2005
2Y0N
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CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN DOSAGE COMPENSATION FACTORS MSL1 AND MSL3
Descriptor: MALE-SPECIFIC LETHAL 1 HOMOLOG, MALE-SPECIFIC LETHAL 3 HOMOLOG
Authors:Kadlec, J, Hallacli, E, Lipp, M, Holz, H, Sanchez Weatherby, J, Cusack, S, Akhtar, A.
Deposit date:2010-12-04
Release date:2011-01-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis for Mof and Msl3 Recruitment Into the Dosage Compensation Complex by Msl1.
Nat.Struct.Mol.Biol., 18, 2011
2Y3X
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Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, complexed with sulfate
Descriptor: 2', 3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE, GLYCEROL, ...
Authors:Myllykoski, M, Kursula, P.
Deposit date:2011-01-04
Release date:2012-01-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Myelin 2',3'-Cyclic Nucleotide 3'-Phosphodiesterase: Active-Site Ligand Binding and Molecular Conformation.
Plos One, 7, 2012
2A37
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Solution structure of the T22G mutant of N-terminal SH3 domain of DRK (DRKN SH3 DOMAIN)
Descriptor: Protein E(sev)2B
Authors:Bezsonova, I, Singer, A, Choy, W.-Y, Tollinger, M, Forman-Kay, J.D.
Deposit date:2005-06-23
Release date:2005-12-13
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural Comparison of the Unstable drkN SH3 Domain and a Stable Mutant
Biochemistry, 44, 2005
4I54
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Crystal structure of clade A/E 93TH057 HIV-1 gp120 H375S core in complex with DMJ-II-121
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HIV-1 glycoprotein, ...
Authors:Le-Khac, M, Hendrickson, W.A.
Deposit date:2012-11-28
Release date:2013-05-29
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-Based Design and Synthesis of an HIV-1 Entry Inhibitor Exploiting X-Ray and Thermodynamic Characterization.
ACS Med Chem Lett, 4, 2013
4BGL
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BU of 4bgl by Molmil
Superoxide reductase (Neelaredoxin) from Archaeoglobus fulgidus
Descriptor: FE (III) ION, GLYCEROL, SUPEROXIDE REDUCTASE
Authors:Bandeiras, T.M, Rodrigues, J.V, Sousa, C.M, Barradas, A.R, Pinho, F.G, Pinto, A.F, Teixeira, M, Matias, P.M, Romao, C.V.
Deposit date:2013-03-27
Release date:2014-04-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Superoxide Reductase from Giardia Intestinalis: Structural Characterization of the First Sor from a Eukaryotic Organism Shows an Iron Centre that is Highly Sensitive to Photoreduction
Acta Crystallogr.,Sect.D, 71, 2015
4I9Q
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BU of 4i9q by Molmil
Crystal structure of the ternary complex of the D714A mutant of RB69 DNA polymerase
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*C)-3'), ...
Authors:Guja, K.E, Jacewicz, A, Trzemecka, A, Plochocka, D, Yakubovskaya, E, Bebenek, A, Garcia-Diaz, M.
Deposit date:2012-12-05
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A Remote Palm Domain Residue of RB69 DNA Polymerase Is Critical for Enzyme Activity and Influences the Conformation of the Active Site.
Plos One, 8, 2013
4HPA
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BU of 4hpa by Molmil
Crystal structure of Nitrophorin 4 from Rhodnius prolixus Complexed with sulfide ion at pH 7.4
Descriptor: HYDROSULFURIC ACID, Nitrophorin-4, PROTOPORPHYRIN IX CONTAINING FE
Authors:Nishikawa, K, Ogata, H, Knipp, M.
Deposit date:2012-10-23
Release date:2013-03-20
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Complexes of ferriheme nitrophorin 4 with low-molecular weight thiol(ate)s occurring in blood plasma
J.Inorg.Biochem., 122, 2013
3NON
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BU of 3non by Molmil
Crystal Structure of Isocyanide Hydratase from Pseudomonas fluorescens
Descriptor: 1,2-ETHANEDIOL, Isocyanide hydratase
Authors:Lakshminarasimhan, M, Madzelan, P, Nan, R, Milkovic, N.M, Wilson, M.A.
Deposit date:2010-06-25
Release date:2010-07-14
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Evolution of New Enzymatic Function by Structural Modulation of Cysteine Reactivity in Pseudomonas fluorescens Isocyanide Hydratase.
J.Biol.Chem., 285, 2010
2A3V
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Structural basis for broad DNA-specificity in integron recombination
Descriptor: DNA (31-MER), DNA (34-MER), site-specific recombinase IntI4
Authors:MacDonald, D, Demarre, G, Bouvier, M, Mazel, D, Gopaul, D.N.
Deposit date:2005-06-27
Release date:2006-05-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for broad DNA-specificity in integron recombination.
Nature, 440, 2006
2A50
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fluorescent protein asFP595, wt, off-state
Descriptor: GFP-like non-fluorescent chromoprotein FP595 chain 1, GFP-like non-fluorescent chromoprotein FP595 chain 2
Authors:Andresen, M, Wahl, M.C, Stiel, A.C, Graeter, F, Schaefer, L, Trowitzsch, S, Weber, G, Eggeling, C, Grubmueller, H, Hell, S.W, Jakobs, S.
Deposit date:2005-06-30
Release date:2005-08-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure and mechanism of the reversible photoswitch of a fluorescent protein
Proc.Natl.Acad.Sci.Usa, 102, 2005
2XKL
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Crystal Structure of Mouse Apolipoprotein M
Descriptor: 1,2-ETHANEDIOL, APOLIPOPROTEIN M, GLYCEROL, ...
Authors:Sevvana, M, Kassler, K, Josefin, A, Weiler, S, Dahlback, B, Sticht, H, Muller, Y.A.
Deposit date:2010-07-09
Release date:2010-10-13
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mouse Apom Displays an Unprecedented Seven-Stranded Lipocalin Fold: Folding Decoy or Alternative Native Fold?
J.Mol.Biol., 404, 2010
2A6O
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Crystal Structure of the ISHp608 Transposase in Complex with Stem-loop DNA
Descriptor: 5'-D(*CP*CP*CP*CP*TP*AP*GP*CP*TP*TP*TP*AP*GP*CP*TP*AP*TP*GP*GP*GP*GP*A)-3', ISHp608 Transposase
Authors:Ronning, D.R, Guynet, C, Ton-Hoang, B, Perez, Z.N, Ghirlando, R, Chandler, M, Dyda, F.
Deposit date:2005-07-03
Release date:2005-10-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Active site sharing and subterminal hairpin recognition in a new class of DNA transposases.
Mol.Cell, 20, 2005
4I7O
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T4 Lysozyme L99A/M102H with 2-amino-5-chlorothiazole bound
Descriptor: 2-HYDROXYETHYL DISULFIDE, 5-chloro-1,3-thiazol-2-amine, ACETATE ION, ...
Authors:Merski, M, Shoichet, B.K.
Deposit date:2012-11-30
Release date:2013-03-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:The impact of introducing a histidine into an apolar cavity site on docking and ligand recognition.
J.Med.Chem., 56, 2013
2XS8
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Crystal Structure of ALIX in complex with the SIVagmTan-1 AYDPARKLL Late Domain
Descriptor: PROGRAMMED CELL DEATH 6-INTERACTING PROTEIN, SIVAGMTAN-1 GAG P6
Authors:Zhai, Q, Landesman, M, Robinson, H, Sundquist, W.I, Hill, C.P.
Deposit date:2010-09-24
Release date:2010-11-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.498 Å)
Cite:Identification and Structural Characterization of the Alix-Binding Late Domains of Sivmac239 and Sivagmtan-1.
J.Virol., 85, 2011
2A4W
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Crystal Structure Of Mitomycin C-Binding Protein Complexed with Copper(II)-Bleomycin A2
Descriptor: BLEOMYCIN A2, COPPER (II) ION, Mitomycin-Binding Protein
Authors:Danshiitsoodol, N, de Pinho, C.A, Matoba, Y, Kumagai, T, Sugiyama, M.
Deposit date:2005-06-30
Release date:2006-07-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Mitomycin C (MMC)-binding Protein from MMC-producing Microorganisms Protects from the Lethal Effect of Bleomycin: Crystallographic Analysis to Elucidate the Binding Mode of the Antibiotic to the Protein
J.Mol.Biol., 360, 2006

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