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PDB: 52259 results

4H3V
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BU of 4h3v by Molmil
Crystal structure of oxidoreductase domain protein from Kribbella flavida
Descriptor: FORMIC ACID, Oxidoreductase domain protein
Authors:Michalska, K, Mack, J.C, McKnight, S.M, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-09-14
Release date:2012-09-26
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Crystal structure of oxidoreductase domain protein from Kribbella flavida
To be Published
3NP6
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BU of 3np6 by Molmil
The crystal structure of Berberine bound to DNA d(CGTACG)
Descriptor: 5'-D(*CP*GP*TP*AP*CP*G)-3', BERBERINE, CALCIUM ION
Authors:Ferraroni, M, Bazzicalupi, C, Gratteri, P, Bilia, A.R.
Deposit date:2010-06-28
Release date:2011-05-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-Ray diffraction analyses of the natural isoquinoline alkaloids Berberine and Sanguinarine complexed with double helix DNA d(CGTACG)
Chem.Commun.(Camb.), 47, 2011
7ZBR
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BU of 7zbr by Molmil
Crystal Structure of full-length Bartonella Effector protein 1
Descriptor: Bartonella effector protein (Bep) substrate of VirB T4SS
Authors:Huber, M.
Deposit date:2022-03-24
Release date:2023-04-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Full-length structure of a FIC effector protein from Bartonella reveals a novel structural domain
To be published
2RKU
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BU of 2rku by Molmil
Structure of PLK1 in complex with BI2536
Descriptor: 4-{[(7R)-8-cyclopentyl-7-ethyl-5-methyl-6-oxo-5,6,7,8-tetrahydropteridin-2-yl]amino}-3-methoxy-N-(1-methylpiperidin-4-yl)benzamide, D(-)-TARTARIC ACID, L(+)-TARTARIC ACID, ...
Authors:Ding, Y.-H, Kothe, M, Kohls, D, Low, S.
Deposit date:2007-10-17
Release date:2008-02-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Selectivity-determining residues in Plk1.
Chem.Biol.Drug Des., 70, 2007
3NX9
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BU of 3nx9 by Molmil
Crystal structure of type I ribosome inactivating protein in complex with maltose at 1.7A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Ribosome inactivating protein, ...
Authors:Pandey, N, Kushwaha, G.S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-07-13
Release date:2010-08-04
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of type I ribosome inactivating protein in complex with maltose at 1.7A resolution
To be Published
1XE4
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BU of 1xe4 by Molmil
Crystal Structure of Weissella viridescens FemX (K36M) Mutant
Descriptor: FemX, MAGNESIUM ION
Authors:Biarrotte-Sorin, S, Maillard, A.P, Arthur, M, Mayer, C.
Deposit date:2004-09-09
Release date:2005-05-31
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure-Based Site-Directed Mutagenesis of the UDP-MurNAc-Pentapeptide-Binding Cavity of the FemX Alanyl Transferase from Weissella viridescens
J.Bacteriol., 187, 2005
4ZGN
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BU of 4zgn by Molmil
Structure Cdc123 complexed with the C-terminal domain of eIF2gamma
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell division cycle protein 123, Eukaryotic translation initiation factor 2 subunit gamma, ...
Authors:Panvert, M, Dubiez, E, Arnold, L, Perez, J, Seufert, W, Mechulam, Y, Schmitt, E.
Deposit date:2015-04-23
Release date:2015-09-30
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Cdc123, a Cell Cycle Regulator Needed for eIF2 Assembly, Is an ATP-Grasp Protein with Unique Features.
Structure, 23, 2015
8A0E
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BU of 8a0e by Molmil
CryoEM structure of DHS-eIF5A1 complex
Descriptor: Deoxyhypusine synthase, Eukaryotic translation initiation factor 5A, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Wator, E, Wilk, P, Biela, A.P, Rawski, M, Grudnik, P.
Deposit date:2022-05-27
Release date:2023-04-05
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM structure of human eIF5A-DHS complex reveals the molecular basis of hypusination-associated neurodegenerative disorders.
Nat Commun, 14, 2023
1XI1
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BU of 1xi1 by Molmil
Phi29 DNA polymerase ssDNA complex, monoclinic crystal form
Descriptor: 5'-D(P*TP*TP*TP*TP*T)-3', DNA polymerase, MAGNESIUM ION
Authors:Kamtekar, S, Berman, A.J, Wang, J, Lazaro, J.M, de Vega, M, Blanco, L, Salas, M, Steitz, T.A.
Deposit date:2004-09-21
Release date:2004-12-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Correction of X-ray intensities from single crystals containing lattice-translocation defects
Acta Crystallogr.,Sect.D, 61, 2005
3NRN
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BU of 3nrn by Molmil
Crystal Structure of PF1083 protein from Pyrococcus furiosus, Northeast Structural Genomics Consortium Target PfR223
Descriptor: ADENOSINE MONOPHOSPHATE, uncharacterized protein PF1083
Authors:Seetharaman, J, Su, M, Patel, P, Xiao, R, Ciccosanti, C, Wang, H, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-06-30
Release date:2010-11-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Northeast Structural Genomics Consortium Target PfR223
To be Published
4ZHH
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BU of 4zhh by Molmil
Siderocalin-mediated recognition and cellular uptake of actinides
Descriptor: CHLORIDE ION, GLYCEROL, N,N'-butane-1,4-diylbis[1-hydroxy-N-(3-{[(1-hydroxy-6-oxo-1,6-dihydropyridin-2-yl)carbonyl]amino}propyl)-6-oxo-1,6-dihydropyridine-2-carboxamide], ...
Authors:Allred, B.E, Rupert, P.B, Gauny, S.S, An, D.D, Ralston, C.Y, Sturzbecher-Hoehne, M, Strong, R.K, Abergel, R.J.
Deposit date:2015-04-24
Release date:2015-08-05
Last modified:2015-09-02
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Siderocalin-mediated recognition, sensitization, and cellular uptake of actinides.
Proc.Natl.Acad.Sci.USA, 112, 2015
1XF9
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BU of 1xf9 by Molmil
Structure of NBD1 from murine CFTR- F508S mutant
Descriptor: ACETIC ACID, ADENOSINE-5'-TRIPHOSPHATE, Cystic fibrosis transmembrane conductance regulator, ...
Authors:Thibodeau, P.H, Brautigam, C.A, Machius, M, Thomas, P.J.
Deposit date:2004-09-14
Release date:2004-12-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Side chain and backbone contributions of Phe508 to CFTR folding.
Nat.Struct.Mol.Biol., 12, 2005
4GO1
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BU of 4go1 by Molmil
Crystal Structure of full length transcription repressor LsrR from E. coli.
Descriptor: GLYCEROL, Transcriptional regulator LsrR
Authors:Wu, M, Tao, Y, Liu, X, Zang, J.
Deposit date:2012-08-17
Release date:2013-04-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis for Phosphorylated Autoinducer-2 Modulation of the Oligomerization State of the Global Transcription Regulator LsrR from Escherichia coli
J.Biol.Chem., 288, 2013
3IBZ
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BU of 3ibz by Molmil
Crystal structure of putative tellurium resistant like protein (TerD) from Streptomyces coelicolor A3(2)
Descriptor: CALCIUM ION, Putative tellurium resistant like protein TerD, SULFATE ION
Authors:Klimecka, M, Chruszcz, M, Cymborowski, M, Xu, X, Cui, H, Joachimiak, A, Edwards, A, Savchenko, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-07-17
Release date:2009-08-18
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal structure of putative tellurium resistant like protein (TerD) from Streptomyces coelicolor A3(2)
To be Published
1XGE
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BU of 1xge by Molmil
Dihydroorotase from Escherichia coli: Loop Movement and Cooperativity between subunits
Descriptor: (4S)-2,6-DIOXOHEXAHYDROPYRIMIDINE-4-CARBOXYLIC ACID, Dihydroorotase, N-CARBAMOYL-L-ASPARTATE, ...
Authors:Lee, M, Chan, C.W, Guss, J.M, Christopherson, R.I, Maher, M.J.
Deposit date:2004-09-17
Release date:2005-04-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Dihydroorotase from Escherichia coli: Loop Movement and Cooperativity between Subunits
J.Mol.Biol., 348, 2005
1XGW
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BU of 1xgw by Molmil
The crystal structure of human enthoprotin N-terminal domain
Descriptor: Epsin 4
Authors:Lunin, V.V, Munger, C, Mazzoni, I, Wagner, J, Cygler, M.
Deposit date:2004-09-17
Release date:2005-09-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structure of human enthoprotin N-terminal domain
TO BE PUBLISHED
4GQ6
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BU of 4gq6 by Molmil
Human menin in complex with MLL peptide
Descriptor: Histone-lysine N-methyltransferase MLL, Menin, PENTAETHYLENE GLYCOL, ...
Authors:Shi, A, Murai, M.J, He, S, Lund, G.L, Hartley, T, Purohit, T, Reddy, G, Chruszcz, M, Grembecka, J, Cierpicki, T.
Deposit date:2012-08-22
Release date:2012-09-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural insights into inhibition of the bivalent menin-MLL interaction by small molecules in leukemia.
Blood, 120, 2012
3E77
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BU of 3e77 by Molmil
Human phosphoserine aminotransferase in complex with PLP
Descriptor: GLYCEROL, PYRIDOXAL-5'-PHOSPHATE, Phosphoserine aminotransferase
Authors:Lehtio, L, Karlberg, T, Andersson, J, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kotenyova, T, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Olesen, K, Persson, C, Sagemark, J, Thorsell, S.G, Tresaugues, L, Van Den Berg, S, Welin, M, Wikstrom, M, Wisniewska, M, Weigelt, J, Schueler, H, Structural Genomics Consortium (SGC)
Deposit date:2008-08-18
Release date:2008-08-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Human phosphoserine aminotransferase in complex with PLP
TO BE PUBLISHED
1XHA
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BU of 1xha by Molmil
Crystal Structures of Protein Kinase B Selective Inhibitors in Complex with Protein Kinase A and Mutants
Descriptor: N-{4-[(4-{3-[(2R)-3,3-DIMETHYLPIPERIDIN-2-YL]-2-FLUORO-6-HYDROXYBENZOYL}BENZOYL)AMINO]AZEPAN-3-YL}ISONICOTINAMIDE, cAMP-dependent protein kinase inhibitor, alpha form, ...
Authors:Breitenlechner, C.B, Friebe, W.-G, Brunet, E, Werner, G, Graul, K, Thomas, U, Kuenkele, K.-P, Schaefer, W, Gassel, M, Bossemeyer, D, Huber, R, Engh, R.A, Masjost, B.
Deposit date:2004-09-17
Release date:2005-09-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Design and crystal structures of protein kinase B-selective inhibitors in complex with protein kinase A and mutants
J.Med.Chem., 48, 2005
4GQD
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BU of 4gqd by Molmil
DNA Holliday junction stabilized by chlorine halogen bond.
Descriptor: DNA (5'-D(*CP*CP*GP*AP*TP*AP*CP*CP*GP*G)-3'), DNA (5'-D(*CP*CP*GP*GP*TP*AP*(UCL)P*CP*GP*G)-3'), SODIUM ION
Authors:Carter, M, Ho, P.S.
Deposit date:2012-08-22
Release date:2013-07-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Enthalpy-entropy compensation in biomolecular halogen bonds measured in DNA junctions.
Biochemistry, 52, 2013
4GQT
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BU of 4gqt by Molmil
N-terminal domain of C. elegans Hsp90
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Heat shock protein 90, ZINC ION
Authors:Osipiuk, J, Chhor, G, Gu, M, Van Oosten-Hawle, P, Morimoto, R.I, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-08-23
Release date:2012-09-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:N-terminal domain of C. elegans Hsp90
To be Published
1X7T
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BU of 1x7t by Molmil
Structure of TTR R104H: a non-amyloidogenic variant with protective clinical effects
Descriptor: Transthyretin
Authors:Neto-Silva, R.M, Macedo-Ribeiro, S, Pereira, P.J.B, Coll, M, Saraiva, M.J, Damas, A.M.
Deposit date:2004-08-16
Release date:2005-03-22
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:X-ray crystallographic studies of two transthyretin variants: further insights into amyloidogenesis.
Acta Crystallogr.,Sect.D, 61, 2005
4ZLK
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BU of 4zlk by Molmil
Crystal structure of mouse myosin-5a in complex with calcium-bound calmodulin
Descriptor: CALCIUM ION, Calmodulin, Unconventional myosin-Va
Authors:Shen, M, Zhang, N, Zheng, S, Zhang, W.-B, Zhang, H.-M, Lu, Z, Su, Q.P, Sun, Y, Ye, K, Li, X.-D.
Deposit date:2015-05-01
Release date:2016-05-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Structural basis for calcium regulation of myosin 5 motor function
To Be Published
3O3F
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BU of 3o3f by Molmil
T. maritima RNase H2 D107N in complex with nucleic acid substrate and magnesium ions
Descriptor: DNA (5'-D(*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*C)-3'), DNA/RNA (5'-D(*GP*AP*CP*AP*C)-R(P*C)-D(P*TP*GP*AP*TP*TP*C)-3'), MAGNESIUM ION, ...
Authors:Rychlik, M.P, Chon, H, Cerritelli, S.M, Klimek, P, Crouch, R.J, Nowotny, M.
Deposit date:2010-07-24
Release date:2010-12-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of RNase H2 in Complex with Nucleic Acid Reveal the Mechanism of RNA-DNA Junction Recognition and Cleavage.
Mol.Cell, 40, 2010
2RN7
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BU of 2rn7 by Molmil
NMR solution structure of TnpE protein from Shigella flexneri. Northeast Structural Genomics Target SfR125
Descriptor: IS629 orfA
Authors:Ramelot, T.A, Cort, J.R, Semesi, A, Garcia, M, Yee, A.A, Arrowsmith, C.H, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-12-08
Release date:2008-01-15
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR solution structure of TnpE protein from Shigella flexneri. Northeast Structural Genomics Target SfR125
To be Published

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