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PDB: 51689 results

5V5Z
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BU of 5v5z by Molmil
Structure of CYP51 from the pathogen Candida albicans
Descriptor: 2-[(2R)-butan-2-yl]-4-{4-[4-(4-{[(2R,4S)-2-(2,4-dichlorophenyl)-2-(1H-1,2,4-triazol-1-ylmethyl)-1,3-dioxolan-4-yl]methoxy}phenyl)piperazin-1-yl]phenyl}-2,4-dihydro-3H-1,2,4-triazol-3-one, Lanosterol 14-alpha demethylase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Keniya, M.V, Sabherwal, M, Wilson, R.K, Sagatova, A.A, Tyndall, J.D.A, Monk, B.C.
Deposit date:2017-03-15
Release date:2017-03-29
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structures of Full-Length Lanosterol 14 alpha-Demethylases of Prominent Fungal Pathogens Candida albicans and Candida glabrata Provide Tools for Antifungal Discovery.
Antimicrob.Agents Chemother., 62, 2018
159L
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BU of 159l by Molmil
CONTROL OF ENZYME ACTIVITY BY AN ENGINEERED DISULFIDE BOND
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, T4 LYSOZYME
Authors:Blaber, M, Matthews, B.W.
Deposit date:1994-06-20
Release date:1994-08-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Alanine scanning mutagenesis of the alpha-helix 115-123 of phage T4 lysozyme: effects on structure, stability and the binding of solvent.
J.Mol.Biol., 246, 1995
5V76
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BU of 5v76 by Molmil
Structure of Haliangium ochraceum BMC-T HO-3341
Descriptor: GLYCEROL, Microcompartments protein
Authors:Sutter, M, Paasch, B, Zarzycki, J, Aussignargues, C, Kerfeld, C.A.
Deposit date:2017-03-17
Release date:2017-06-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Assembly principles and structure of a 6.5-MDa bacterial microcompartment shell.
Science, 356, 2017
2YJY
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BU of 2yjy by Molmil
A specific and modular binding code for cytosine recognition in PUF domains
Descriptor: 5'-R(*AP*UP*UP*GP*CP*AP*UP*AP*UP*AP)-3', PUMILIO HOMOLOG 1
Authors:Dong, S, Wang, Y, Cassidy-Amstutz, C, Lu, G, Qiu, C, Bigler, R, Jezyk, M, Li, C, Hall, T.M.T, Wang, Z.
Deposit date:2011-05-24
Release date:2011-06-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:Specific and Modular Binding Code for Cytosine Recognition in Pumilio/Fbf (Puf) RNA-Binding Domains.
J.Biol.Chem., 286, 2011
8D43
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BU of 8d43 by Molmil
Cryo-EM structure of human Kidney Glucosidase II
Descriptor: CALCIUM ION, Glucosidase 2 subunit beta, Neutral alpha-glucosidase AB, ...
Authors:Lyu, M, Yu, E.W.
Deposit date:2022-06-01
Release date:2022-11-16
Method:ELECTRON MICROSCOPY (2.88 Å)
Cite:Cryo-EM structure of human Kidney Glucosidase II
To Be Published
5V85
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BU of 5v85 by Molmil
The crystal structure of the protein of DegV family COG1307 from Ruminococcus gnavus ATCC 29149 (alternative refinement of PDB 3JR7 with Vaccenic acid)
Descriptor: EDD domain protein, DegV family, PHOSPHATE ION, ...
Authors:Cuypers, M.G, Ericson, M, subramanian, C, White, S.W, Rock, C.O.
Deposit date:2017-03-21
Release date:2018-11-21
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:The crystal structure of the Staphylococcus aureus Fatty acid Kinase (Fak) B1 protein loaded with palmitic acid to 1.83 Angstroem resolution
J.Biol.Chem., 2018
8DJH
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BU of 8djh by Molmil
Ternary complex of SUMO1 with a phosphomimetic SIM of PML and zinc
Descriptor: PML 4SD, Small ubiquitin-related modifier 1, ZINC ION
Authors:Lussier-Price, M, Wahba, H.M, Mascle, X.H, Cappadocia, L, Bourdeau, V, Gagnon, C, Igelmann, S, Sakaguchi, K, Ferbeyre, G, Omichinski, J.G.
Deposit date:2022-06-30
Release date:2022-08-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Zinc controls PML nuclear body formation through regulation of a paralog specific auto-inhibition in SUMO1.
Nucleic Acids Res., 50, 2022
5FTD
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BU of 5ftd by Molmil
Crystal structure of Pif1 helicase from Bacteroides apo form
Descriptor: PHOSPHATE ION, TPR DOMAIN PROTEIN
Authors:Chen, W.-F, Dai, Y.-X, Duan, X.-L, Liu, N.-N, Shi, W, Li, M, Dou, S.-X, Li, N, Dong, Y.-H, Rety, S, Xi, X.-G.
Deposit date:2016-01-12
Release date:2016-02-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.695 Å)
Cite:Crystal Structures of the Bspif1 Helicase Reveal that a Major Movement of the 2B SH3 Domain is Required for DNA Unwinding
Nucleic Acids Res., 44, 2016
5FTL
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BU of 5ftl by Molmil
Cryo-EM structure of human p97 bound to ATPgS (Conformation I)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, TRANSITIONAL ENDOPLASMIC RETICULUM ATPASE
Authors:Banerjee, S, Bartesaghi, A, Merk, A, Rao, P, Bulfer, S.L, Yan, Y, Green, N, Mroczkowski, B, Neitz, R.J, Wipf, P, Falconieri, V, Deshaies, R.J, Milne, J.L.S, Huryn, D, Arkin, M, Subramaniam, S.
Deposit date:2016-01-14
Release date:2016-01-27
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:2.3 A Resolution Cryo-Em Structure of Human P97 and Mechanism of Allosteric Inhibition
Science, 351, 2016
8DJI
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BU of 8dji by Molmil
Ternary complex of SUMO1 with the SIM of PML and zinc
Descriptor: Protein PML, Small ubiquitin-related modifier 1, ZINC ION
Authors:Lussier-Price, M, Wahba, H.M, Mascle, X.H, Cappadocia, L, Bourdeau, V, Gagnon, C, Igelmann, S, Sakaguchi, K, Ferbeyre, G, Omichinski, J.G.
Deposit date:2022-06-30
Release date:2022-08-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Zinc controls PML nuclear body formation through regulation of a paralog specific auto-inhibition in SUMO1.
Nucleic Acids Res., 50, 2022
5VAJ
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BU of 5vaj by Molmil
BhRNase H - amide-RNA/DNA complex
Descriptor: ACETATE ION, DNA (5'-D(*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*C)-3'), GLYCEROL, ...
Authors:Pallan, P.S, Egli, M.
Deposit date:2017-03-27
Release date:2017-09-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Amide linkages mimic phosphates in RNA interactions with proteins and are well tolerated in the guide strand of short interfering RNAs.
Nucleic Acids Res., 45, 2017
7QBJ
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BU of 7qbj by Molmil
bacterial IMPDH chimera
Descriptor: Inosine-5'-monophosphate dehydrogenase
Authors:Labesse, G, Gelin, M, Munier-Lehmann, H, Gedeon, A, Haouz, A.
Deposit date:2021-11-19
Release date:2023-05-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Insight into the role of the Bateman domain at the molecular and physiological levels through engineered IMP dehydrogenases.
Protein Sci., 32, 2023
5K7B
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BU of 5k7b by Molmil
Beclin 2 CCD homodimer
Descriptor: Beclin-2
Authors:Su, M, Sinha, S.
Deposit date:2016-05-25
Release date:2017-03-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:BECN2 interacts with ATG14 through a metastable coiled-coil to mediate autophagy.
Protein Sci., 26, 2017
8D44
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BU of 8d44 by Molmil
Cryo-electron microscopy structure of human kidney Fructose-bisphosphate aldolase B
Descriptor: Fructose-bisphosphate aldolase B
Authors:Lyu, M, Yu, E.W.
Deposit date:2022-06-01
Release date:2022-11-16
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-electron microscopy structure of human kidney Fructose-bisphosphate aldolase B
To Be Published
5JYK
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BU of 5jyk by Molmil
Deg9 crystal under 289K
Descriptor: GLYCEROL, Protease Do-like 9
Authors:Ouyang, M, Zhang, L.X.
Deposit date:2016-05-14
Release date:2017-05-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.297 Å)
Cite:The crystal structure of Deg9 reveals a novel octameric-type HtrA protease
Nat Plants, 3, 2017
7PZY
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BU of 7pzy by Molmil
Structure of the vacant Candida albicans 80S ribosome
Descriptor: 1,4-DIAMINOBUTANE, 18S ribosomal RNA, 25S ribosomal RNA, ...
Authors:Zgadzay, Y, Kolosova, O, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
Deposit date:2021-10-13
Release date:2022-05-18
Last modified:2022-06-08
Method:ELECTRON MICROSCOPY (2.32 Å)
Cite:E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
5A6A
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BU of 5a6a by Molmil
GH20C, Beta-hexosaminidase from Streptococcus pneumoniae in complex with NGT
Descriptor: 1,2-ETHANEDIOL, 3AR,5R,6S,7R,7AR-5-HYDROXYMETHYL-2-METHYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-DIOL, N-ACETYL-BETA-D-GLUCOSAMINIDASE
Authors:Cid, M, Robb, C.S, Higgins, M.A, Boraston, A.B.
Deposit date:2015-06-24
Release date:2015-09-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:A Second beta-Hexosaminidase Encoded in the Streptococcus pneumoniae Genome Provides an Expanded Biochemical Ability to Degrade Host Glycans.
J. Biol. Chem., 290, 2015
7Q0P
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BU of 7q0p by Molmil
Structure of the Candida albicans 80S ribosome in complex with anisomycin
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0, ...
Authors:Kolosova, O, Zgadzay, Y, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
Deposit date:2021-10-15
Release date:2022-05-18
Last modified:2022-06-08
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
7Q0F
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BU of 7q0f by Molmil
Structure of Candida albicans 80S ribosome in complex with phyllanthoside
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 3-O-acetyl-2-O-(3-O-acetyl-6-deoxy-beta-D-glucopyranosyl)-6-deoxy-1-O-{[(2R,2'S,3a'R,4''S,5''R,6'S,7a'S)-5''-methyl-4''-{[(2E)-3-phenylprop-2-enoyl]oxy}decahydrodispiro[oxirane-2,3'-[1]benzofuran-2',2''-pyran]-6'-yl]carbonyl}-beta-D-glucopyranose, ...
Authors:Zgadzay, Y, Kolosova, O, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
Deposit date:2021-10-14
Release date:2022-05-18
Last modified:2022-06-08
Method:ELECTRON MICROSCOPY (2.64 Å)
Cite:E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
5FLL
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BU of 5fll by Molmil
Crystal structure of the 6-carboxyhexanoate-CoA ligase (BioW) from Bacillus subtilis in complex with a Pimeloyl-adenylate
Descriptor: 6-CARBOXYHEXANOATE-COA LIGASE, MAGNESIUM ION, PIMELOYL-AMP, ...
Authors:Moynie, L, Wang, M, Campopiano, D.J, Naismith, J.H.
Deposit date:2015-10-26
Release date:2016-11-16
Last modified:2018-06-13
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Using the pimeloyl-CoA synthetase adenylation fold to synthesize fatty acid thioesters.
Nat. Chem. Biol., 13, 2017
5UJP
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BU of 5ujp by Molmil
The crystal structure of a glyoxalase/bleomycin resistance protein from Streptomyces sp. CB03234
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, Glyoxalase/bleomycin resisance protein/dioxygenase
Authors:Tan, K, Li, H, Endres, M, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2017-01-18
Release date:2017-02-22
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:The crystal structure of a glyoxalase/bleomycin resistance protein from Streptomyces sp. CB03234
To Be Published
5UN2
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BU of 5un2 by Molmil
Crystal Structure of Mouse Cadherin-23 EC19-21 with non-syndromic deafness (DFNB12) associated mutation R2029W
Descriptor: CALCIUM ION, Cadherin-23, POTASSIUM ION
Authors:Jaiganesh, A, Sotomayor, M.
Deposit date:2017-01-30
Release date:2018-02-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Zooming in on Cadherin-23: Structural Diversity and Potential Mechanisms of Inherited Deafness.
Structure, 26, 2018
5AJN
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BU of 5ajn by Molmil
Crystal structure of the inactive form of GalNAc-T2 in complex with the glycopeptide MUC5AC-Cys13
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-galactopyranose, MUCIN, ...
Authors:Lira-Navarrete, E, delasRivas, M, Companon, I, Pallares, M.C, Kong, Y, Iglesias-Fernandez, J, Bernardes, G.J.L, Peregrina, J.M, Rovira, C, Bernado, P, Bruscolini, P, Clausen, H, Lostao, A, Corzana, F, Hurtado-Guerrero, R.
Deposit date:2015-02-26
Release date:2015-03-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Dynamic Interplay between Catalytic and Lectin Domains of Galnac-Transferases Modulates Protein O-Glycosylation.
Nat.Commun., 6, 2015
7ZJJ
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BU of 7zjj by Molmil
CspZ (BbCRASP-2) from Borrelia burgdorferi strain B379
Descriptor: CspZ, NITRATE ION
Authors:Brangulis, K, Marcinkiewicz, A, Hart, T.M, Dupuis, A.P, Zamba Campero, M, Nowak, T.A, Stout, J.L, Akopjana, I, Kazaks, A, Bogans, J, Ciota, A.T, Kraiczy, P, Kolokotronis, S.O, Lin, Y.-P.
Deposit date:2022-04-11
Release date:2023-04-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural evolution of an immune evasion determinant shapes pathogen host tropism.
Proc.Natl.Acad.Sci.USA, 120, 2023
5ULE
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BU of 5ule by Molmil
Structure and function of the divalent anion/Na+ symporter from Vibrio cholerae and a humanized variant
Descriptor: SODIUM ION, SUCCINIC ACID, Transporter, ...
Authors:Lu, M.
Deposit date:2017-01-24
Release date:2017-05-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and function of the divalent anion/Na(+) symporter from Vibrio cholerae and a humanized variant.
Nat Commun, 8, 2017

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