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PDB: 51964 results

5HYD
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BU of 5hyd by Molmil
Crystal structure of calcium-free human S100Z
Descriptor: Protein S100-Z
Authors:Calderone, V, Fragai, M, Luchinat, C, Gallo, G.
Deposit date:2016-02-01
Release date:2017-02-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Solving the crystal structure of human calcium-free S100Z: the siege and conquer of one of the last S100 family strongholds.
J. Biol. Inorg. Chem., 22, 2017
1IM7
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BU of 1im7 by Molmil
Solution structure of synthetic cyclic peptide mimicking the loop of HIV-1 gp41 glycoprotein envelope
Descriptor: GP41-PARENT PEPTIDE ACE-ILE-TRP-GLY-CYS-SER-GLY-LYS-LEU-ILE-CYS-THR-THR-ALA
Authors:Phan Chan Du, A, Limal, D, Semetey, V, Dali, H, Jolivet, M, Desgranges, C, Cung, M.T, Briand, J.P, Petit, M.C, Muller, S.
Deposit date:2001-05-10
Release date:2002-10-23
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structural and immunological characterisation of heteroclitic peptide analogues corresponding to the 600-612 region of the HIV envelope gp41 glycoprotein.
J.Mol.Biol., 323, 2002
5OY1
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BU of 5oy1 by Molmil
Direct-evolutioned unspecific peroxygenase from Agrocybe aegerita, in complex with DMSO
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Ramirez-Escudero, M, Sanz-Aparicio, J.
Deposit date:2017-09-07
Release date:2018-10-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Structural Insights into the Substrate Promiscuity of a Laboratory-Evolved Peroxygenase.
Acs Chem.Biol., 13, 2018
7R1J
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BU of 7r1j by Molmil
Crystal structure of a flavodiiron protein S262Y mutant in the reduced state from Escherichia coli
Descriptor: Anaerobic nitric oxide reductase flavorubredoxin, FE (III) ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Borges, P.T, Teixeira, M, Romao, C.V, Frazao, C.
Deposit date:2022-02-03
Release date:2023-02-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Crystal structure of a flavodiiron protein S262Y mutant in the reduced state from Escherichia coli
To Be Published
5K1Y
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BU of 5k1y by Molmil
P2(1) Structure of pNOB8 AspA-DNA complex
Descriptor: AspA, DNA (33-MER)
Authors:Schumacher, M.
Deposit date:2016-05-18
Release date:2016-06-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:Detailed structural analysis of AspA-DNA contacts
To Be Published
7R2P
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BU of 7r2p by Molmil
Crystal structure of a flavodiiron protein D52K/S262Y mutant in the oxidized state from Escherichia coli
Descriptor: Anaerobic nitric oxide reductase flavorubredoxin, FE (III) ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Borges, P.T, Teixeira, M, Romao, C.V, Frazao, C.
Deposit date:2022-02-05
Release date:2023-02-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.538 Å)
Cite:Crystal structure of a flavodiiron protein D52K/S262Y mutant in the oxidized state from Escherichia coli
To Be Published
3AMO
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BU of 3amo by Molmil
Time-resolved X-ray Crystal Structure Analysis of Enzymatic Reaction of Copper Amine Oxidase from Arthrobacter globiformis
Descriptor: COPPER (II) ION, GLYCEROL, Phenylethylamine oxidase, ...
Authors:Kataoka, M, Oya, H, Tominaga, A, Otsu, M, Okajima, T, Tanizawa, K, Yamaguchi, H.
Deposit date:2010-08-20
Release date:2011-11-23
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Detection of the reaction intermediates catalyzed by a copper amine oxidase.
J.SYNCHROTRON RADIAT., 18, 2011
6ZFL
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BU of 6zfl by Molmil
High resolution structure of VEGF-A 12:107 crystallized in tetragonal form
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, PHOSPHATE ION, Vascular endothelial growth factor A
Authors:Gaucher, J.-F, Broussy, S, Reille-Seroussi, M.
Deposit date:2020-06-17
Release date:2021-06-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and ITC Characterization of Peptide-Protein Binding: Thermodynamic Consequences of Cyclization Constraints, a Case Study on Vascular Endothelial Growth Factor Ligands.
Chemistry, 2022
5HVN
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BU of 5hvn by Molmil
3.0 Angstrom Crystal Structure of 3-dehydroquinate Synthase (AroB) from Francisella tularensis in Complex with NAD.
Descriptor: 3-dehydroquinate synthase, CHLORIDE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Minasov, G, Light, S.H, Shuvalova, L, Dubrovska, I, Winsor, J, Zhou, M, Grimshaw, S, Kwon, K, Joachimiak, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-01-28
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:3.0 Angstrom Crystal Structure of 3-dehydroquinate Synthase (AroB) from Francisella tularensis in Complex with NAD.
To Be Published
7R0F
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BU of 7r0f by Molmil
Crystal structure of a flavodiiron protein D52K mutant in the oxidized state from Escherichia coli
Descriptor: Anaerobic nitric oxide reductase flavorubredoxin, FE (III) ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Borges, P.T, Teixeira, M, Romao, C.V, Frazao, C.
Deposit date:2022-02-02
Release date:2023-02-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.978 Å)
Cite:Crystal structure of a flavodiiron protein D52K mutant in the oxidized state from Escherichia coli
To Be Published
1INX
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BU of 1inx by Molmil
A SIALIC ACID DERIVED PHOSPHONATE ANALOG INHIBITS DIFFERENT STRAINS OF INFLUENZA VIRUS NEURAMINIDASE WITH DIFFERENT EFFICIENCIES
Descriptor: (1R)-4-acetamido-1,5-anhydro-2,4-dideoxy-1-phosphono-D-glycero-D-galacto-octitol, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:White, C.L, Janakiraman, M.N, Laver, W.G, Philippon, C, Vasella, A, Air, G.M, Luo, M.
Deposit date:1994-09-26
Release date:1995-02-07
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A sialic acid-derived phosphonate analog inhibits different strains of influenza virus neuraminidase with different efficiencies.
J.Mol.Biol., 245, 1995
7R2O
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BU of 7r2o by Molmil
Crystal structure of a flavodiiron protein S262Y mutant in the oxidized state from Escherichia coli
Descriptor: Anaerobic nitric oxide reductase flavorubredoxin, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
Authors:Borges, P.T, Teixeira, M, Romao, C.V, Frazao, C.
Deposit date:2022-02-05
Release date:2023-02-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of a flavodiiron protein S262Y mutant in the oxidized state from Escherichia coli
To Be Published
7R2R
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BU of 7r2r by Molmil
Crystal structure of a flavodiiron protein D52K/S262Y mutant in the reduced state from Escherichia coli
Descriptor: Anaerobic nitric oxide reductase flavorubredoxin, FE (III) ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Borges, P.T, Teixeira, M, Romao, C.V, Frazao, C.
Deposit date:2022-02-05
Release date:2023-02-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.198 Å)
Cite:Crystal structure of a flavodiiron protein D52K/S262Y mutant in the reduced state from Escherichia coli
To Be Published
5HS1
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BU of 5hs1 by Molmil
Saccharomyces cerevisiae CYP51 (Lanosterol 14-alpha demethylase) complexed with Voriconazole
Descriptor: Lanosterol 14-alpha demethylase, PROTOPORPHYRIN IX CONTAINING FE, Voriconazole
Authors:Sabherwal, M, Sagatova, A, Keniya, M.V, Wilson, R.K, Tyndall, J.D.A, Monk, B.C.
Deposit date:2016-01-24
Release date:2016-06-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Triazole resistance mediated by mutations of a conserved active site tyrosine in fungal lanosterol 14 alpha-demethylase.
Sci Rep, 6, 2016
3FML
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BU of 3fml by Molmil
P38 kinase crystal structure in complex with RO6224
Descriptor: 6-(2,4-difluorophenoxy)-N-[(1S)-1-methyl-2-(methylsulfonyl)ethyl]-1H-pyrazolo[3,4-d]pyrimidin-3-amine, Mitogen-activated protein kinase 14
Authors:Kuglstatter, A, Ghate, M.
Deposit date:2008-12-22
Release date:2009-12-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:P38 kinase crystal structure in complex with RO6224
To be Published
7R1H
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BU of 7r1h by Molmil
Crystal structure of a flavodiiron protein D52K mutant in the reduced state from Escherichia coli
Descriptor: Anaerobic nitric oxide reductase flavorubredoxin, FE (III) ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Borges, P.T, Teixeira, M, Romao, C.V, Frazao, C.
Deposit date:2022-02-03
Release date:2023-02-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal structure of a flavodiiron protein D52K mutant in the reduced state from Escherichia coli
To Be Published
7R2S
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BU of 7r2s by Molmil
Crystal structure of a flavodiiron protein D52K mutant from Escherichia coli pressurized with krypton gas
Descriptor: Anaerobic nitric oxide reductase flavorubredoxin, FE (III) ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Borges, P.T, Teixeira, M, Romao, C.V, Frazao, C.
Deposit date:2022-02-05
Release date:2023-02-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.194 Å)
Cite:Crystal structure of a flavodiiron protein D52K mutant from Escherichia coli pressurized with krypton gas
To Be Published
6ZEC
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BU of 6zec by Molmil
Crystal Structure of the Fab Fragment of a Glycosylated Lymphoma Antibody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab fragment heavy chain, Fab fragment light chain, ...
Authors:Allen, J.D, Watanabe, Y, Crispin, M, Bowden, T.A.
Deposit date:2020-06-16
Release date:2021-06-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Insertion of atypical glycans into the tumor antigen-binding site identifies DLBCLs with distinct origin and behavior.
Blood, 138, 2021
5HYF
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BU of 5hyf by Molmil
Glycosylated Knob-Knob Fc fragment (P6122)
Descriptor: Ig gamma-1 chain C region, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-beta-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-beta-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Kuglstatter, A, Stihle, M, Benz, J.
Deposit date:2016-02-01
Release date:2017-02-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural differences between glycosylated, disulfide-linked heterodimeric Knob-into-Hole Fc fragment and its homodimeric Knob-Knob and Hole-Hole side products.
Protein Eng. Des. Sel., 30, 2017
5JSO
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BU of 5jso by Molmil
Structures of DddQ from Ruegeria lac. Reveal Key Residues for Metal Binding and Catalysis - TRIS bound
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, Dimethlysulfonioproprionate lyase DddQ, ...
Authors:Brummett, A.E, Dey, M.
Deposit date:2016-05-09
Release date:2017-02-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:New Mechanistic Insight from Substrate- and Product-Bound Structures of the Metal-Dependent Dimethylsulfoniopropionate Lyase DddQ.
Biochemistry, 55, 2016
3AOS
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BU of 3aos by Molmil
Crystal structure of juvenile hormone binding protein from silkworm in complex with JH II
Descriptor: Hemolymph juvenile hormone binding protein, methyl (2E,6E)-9-[(2R,3S)-3-ethyl-3-methyloxiran-2-yl]-3,7-dimethylnona-2,6-dienoate
Authors:Fujimoto, Z, Suzuki, R, Shiotsuki, T, Momma, M, Yamazaki, T.
Deposit date:2010-10-06
Release date:2011-10-12
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural mechanism of JH delivery in hemolymph by JHBP of silkworm, Bombyx mori
Sci Rep, 1, 2011
8OMT
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BU of 8omt by Molmil
X-ray structure of lysozyme obtained upon reaction with [VIVO(empp)2] (Structure C)
Descriptor: 1-methyl-2-ethyl-3-hydroxy-4(1H)-pyridinone)V(IV)O4, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Lysozyme C, ...
Authors:Paolillo, M, Merlino, A, Ferraro, G.
Deposit date:2023-03-31
Release date:2023-06-07
Method:X-RAY DIFFRACTION (1.097 Å)
Cite:Implications of Protein Interaction in the Speciation of Potential V IV O-Pyridinone Drugs.
Inorg.Chem., 62, 2023
8PKJ
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BU of 8pkj by Molmil
Cryo-EM structure of the nucleosome containing Nr5a2 motif at SHL+5.5
Descriptor: DNA, Histone H2A, Histone H2B, ...
Authors:Kobayashi, W, Sappler, A, Bollschweiler, D, Kummecke, M, Basquin, J, Arslantas, E, Ruangroengkulrith, S, Hornberger, R, Duderstadt, K, Tachibana, K.
Deposit date:2023-06-26
Release date:2024-02-28
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Nucleosome-bound NR5A2 structure reveals pioneer factor mechanism by DNA minor groove anchor competition.
Nat.Struct.Mol.Biol., 31, 2024
5GAD
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BU of 5gad by Molmil
RNC-SRP-SR complex early state
Descriptor: 1A9L SS, 23S rRNA, 50S ribosomal protein L10, ...
Authors:Jomaa, A, Boehringer, D, Leibundgut, M, Ban, N.
Deposit date:2015-11-24
Release date:2016-01-27
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structures of the E. coli translating ribosome with SRP and its receptor and with the translocon.
Nat Commun, 7, 2016
5G1F
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BU of 5g1f by Molmil
Crystal structure of the 6-carboxyhexanoate-CoA ligase (BioW)from Bacillus subtilis in complex with coenzyme A
Descriptor: 6-CARBOXYHEXANOATE-COA LIGASE, COENZYME A, NONAETHYLENE GLYCOL, ...
Authors:Moynie, L, Wang, M, Campopiano, D.J, Naismith, J.H.
Deposit date:2016-03-25
Release date:2017-03-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The Structure of the 6-Carboxyhexanoate-Coa Ligase from Bacillus Subtilis
To be Published

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