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PDB: 51689 results

6QNV
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Fibrinogen-like globe domain of Human Tenascin-C
Descriptor: Tenascin
Authors:Coker, J.A, Bezerra, G.A, Bradshaw, W.J, Zhang, M, Yosaatmadja, Y, Fernandez-Cid, A, Shrestha, L, Burgess-Brown, N, Gileadi, O, Arrowsmith, C.H, Bountra, C, Midwood, K.S, Yue, W.W, Marsden, B.D, Structural Genomics Consortium (SGC)
Deposit date:2019-02-12
Release date:2019-02-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Fibrinogen-like globe domain of Human Tenascin-C
To Be Published
6WVT
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BU of 6wvt by Molmil
Structural basis of alphaE-catenin - F-actin catch bond behavior
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Xu, X.P, Pokutta, S, Torres, M, Swift, M.F, Hanein, D, Volkmann, N, Weis, W.I.
Deposit date:2020-05-06
Release date:2020-10-07
Method:ELECTRON MICROSCOPY (3.56 Å)
Cite:Structural basis of alpha E-catenin-F-actin catch bond behavior.
Elife, 9, 2020
6WY2
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BU of 6wy2 by Molmil
Crystal structure of RNA-10mer: CCGG(N4-methyl-C)GCCGG
Descriptor: MAGNESIUM ION, POTASSIUM ION, RNA-10mer: CCGG(4-methyl-C)GCCGG
Authors:Sekula, B, Ruszkowski, M, Mao, S, Haruehanroengra, P, Sheng, J.
Deposit date:2020-05-12
Release date:2020-09-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.928 Å)
Cite:Base pairing, structural and functional insights into N4-methylcytidine (m4C) and N4,N4-dimethylcytidine (m42C) modified RNA.
Nucleic Acids Res., 48, 2020
6QO5
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BU of 6qo5 by Molmil
Crystal structure of apo (metal-free) ribonucleotide reductase NrdF from Bacillus anthracis
Descriptor: CHLORIDE ION, Ribonucleoside-diphosphate reductase subunit beta, SULFATE ION
Authors:Grave, K, Hogbom, M.
Deposit date:2019-02-12
Release date:2019-08-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.511 Å)
Cite:Redox-induced structural changes in the di-iron and di-manganese forms of Bacillus anthracis ribonucleotide reductase subunit NrdF suggest a mechanism for gating of radical access.
J.Biol.Inorg.Chem., 24, 2019
7UT3
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BU of 7ut3 by Molmil
Crystal structure of complex of Fab, G10C with GalNAc-pNP
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-nitrophenyl 2-acetamido-2-deoxy-alpha-D-galactopyranoside, Fab protein heavy chain, ...
Authors:Li, M, Wlodawer, A.
Deposit date:2022-04-26
Release date:2022-09-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Development of a GalNAc-Tyrosine-Specific Monoclonal Antibody and Detection of Tyrosine O -GalNAcylation in Numerous Human Tissues and Cell Lines.
J.Am.Chem.Soc., 144, 2022
6QOB
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BU of 6qob by Molmil
Crystal structure of ribonucleotide reductase NrdF from Bacillus anthracis with partially oxidised di-iron metallocofactor
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (III) ION, Ribonucleoside-diphosphate reductase subunit beta, ...
Authors:Grave, K, Hogbom, M.
Deposit date:2019-02-12
Release date:2019-08-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.457 Å)
Cite:Redox-induced structural changes in the di-iron and di-manganese forms of Bacillus anthracis ribonucleotide reductase subunit NrdF suggest a mechanism for gating of radical access.
J.Biol.Inorg.Chem., 24, 2019
4MD6
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BU of 4md6 by Molmil
Crystal structure of PDE5 in complex with inhibitor 5R
Descriptor: 3-(4-hydroxybenzyl)-1-(thiophen-2-yl)chromeno[2,3-c]pyrrol-9(2H)-one, MAGNESIUM ION, SULFATE ION, ...
Authors:Cui, W, Huang, M, Shao, Y, Luo, H.
Deposit date:2013-08-22
Release date:2014-07-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of 3-(4-hydroxybenzyl)-1-(thiophen-2-yl)chromeno[2,3-c]pyrrol-9(2H)-one as a phosphodiesterase-5 inhibitor and its complex crystal structure.
Biochem Pharmacol, 89, 2014
6QTQ
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BU of 6qtq by Molmil
Crystal structure of an Arabidopsis WD40 domain in complex with photoreceptor
Descriptor: E3 ubiquitin-protein ligase COP1, GLYCEROL, SULFATE ION, ...
Authors:Hothorn, M, Lau, K.
Deposit date:2019-02-25
Release date:2019-07-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Plant photoreceptors and their signaling components compete for COP1 binding via VP peptide motifs.
Embo J., 38, 2019
6QTX
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BU of 6qtx by Molmil
Crystal structure of an Arabidopsis WD40 domain in complex with a flowering transcription factor homolog
Descriptor: E3 ubiquitin-protein ligase COP1, GLYCEROL, SULFATE ION, ...
Authors:Hothorn, M, Lau, K.
Deposit date:2019-02-25
Release date:2019-07-10
Last modified:2019-10-02
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Plant photoreceptors and their signaling components compete for COP1 binding via VP peptide motifs.
Embo J., 38, 2019
6QU1
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BU of 6qu1 by Molmil
Crystal structure of the KAP1 RBCC domain in complex with the SMARCAD1 CUE1 domain at 3.7 angstrom resolution.
Descriptor: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1, Transcription intermediary factor 1-beta,Transcription intermediary factor 1-beta, ZINC ION
Authors:Newman, J.A, Aitkenhead, H, Gavard, A, Lim, M, Williams, H.L, Svejstrup, J.Q, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Gileadi, O.
Deposit date:2019-02-26
Release date:2019-07-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:A Ubiquitin-Binding Domain that Binds a Structural Fold Distinct from that of Ubiquitin.
Structure, 2019
1AXI
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BU of 1axi by Molmil
STRUCTURAL PLASTICITY AT THE HGH:HGHBP INTERFACE
Descriptor: GROWTH HORMONE, GROWTH HORMONE RECEPTOR, SULFATE ION
Authors:Atwell, S, Ultsch, M, De Vos, A.M, Wells, J.A.
Deposit date:1997-10-15
Release date:1998-01-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural plasticity in a remodeled protein-protein interface.
Science, 278, 1997
1V5Q
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BU of 1v5q by Molmil
Solution Structure of the PDZ Domain from Mouse Glutamate Receptor Interacting Protein 1A-L (GRIP1) Homolog
Descriptor: Glutamate Receptor Interacting Protein 1A-L Homolog
Authors:Sato, M, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-11-25
Release date:2004-05-25
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of the PDZ Domain from Mouse Glutamate Receptor Interacting Protein 1A-L (GRIP1) Homolog
To be Published
1B0D
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BU of 1b0d by Molmil
Structural effects of monovalent anions on polymorphic lysozyme crystals
Descriptor: LYSOZYME, PARA-TOLUENE SULFONATE
Authors:Vaney, M.C, Broutin, I, Retailleau, P, Lafont, S, Hamiaux, C, Prange, T, Ries-Kautt, M, Ducruix, A.
Deposit date:1998-11-07
Release date:1998-11-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural effects of monovalent anions on polymorphic lysozyme crystals.
Acta Crystallogr.,Sect.D, 57, 2001
6WHL
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BU of 6whl by Molmil
The crystal structure of a beta-lactamase from Legionella pneumophila str. Paris
Descriptor: Beta-lactamase, GLYCEROL
Authors:Tan, K, Wu, R, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-04-08
Release date:2020-04-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of a beta-lactamase from Legionella pneumophila str. Paris
To Be Published
6N9D
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BU of 6n9d by Molmil
Complex of tissue inhibitor of metalloproteinases-1 (TIMP-1) mutant (L34G/L133P/L151C/G154A) with matrix metalloproteinase-3 catalytic domain (MMP-3cd)
Descriptor: CALCIUM ION, Metalloproteinase inhibitor 1, Stromelysin-1, ...
Authors:Raeeszadeh-Sarmazdeh, M, Radisky, E.S, Sankaran, B.
Deposit date:2018-12-03
Release date:2019-05-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Directed evolution of the metalloproteinase inhibitor TIMP-1 reveals that its N- and C-terminal domains cooperate in matrix metalloproteinase recognition.
J.Biol.Chem., 294, 2019
6QQ5
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BU of 6qq5 by Molmil
Cryo-EM structure of dimeric quinol dependent nitric oxide reductase (qNOR) from Alcaligenes xylosoxidans
Descriptor: CALCIUM ION, FE (III) ION, Nitric oxide reductase subunit B, ...
Authors:Gopalasingam, C.C, Johnson, R.M, Chiduza, G.N, Tosha, T, Yamamoto, M, Shiro, Y, Antonyuk, S.V, Muench, S.P, Hasnain, S.S.
Deposit date:2019-02-17
Release date:2019-09-11
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Dimeric structures of quinol-dependent nitric oxide reductases (qNORs) revealed by cryo-electron microscopy.
Sci Adv, 5, 2019
6N9T
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BU of 6n9t by Molmil
Structure of a peptide-based photo-affinity cross-linker with Herceptin Fc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Immunoglobulin G1 FC, ...
Authors:Sadowsky, J, Ultsch, M, Vance, N, Wang, W.
Deposit date:2018-12-04
Release date:2019-01-16
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.576 Å)
Cite:Development, Optimization, and Structural Characterization of an Efficient Peptide-Based Photoaffinity Cross-Linking Reaction for Generation of Homogeneous Conjugates from Wild-Type Antibodies.
Bioconjug. Chem., 30, 2019
6N9K
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BU of 6n9k by Molmil
Beta-lactamase from Escherichia coli str. Sakai
Descriptor: 1,2-ETHANEDIOL, Beta-lactamase, GLYCEROL, ...
Authors:Osipiuk, J, Wu, R, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-12-03
Release date:2018-12-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Beta-lactamase from Escherichia coli str. Sakai
to be published
1V6F
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BU of 1v6f by Molmil
Solution Structure of Glia Maturation Factor-beta from Mus Musculus
Descriptor: glia maturation factor, beta
Authors:Goroncy, A.K, Kigawa, T, Koshiba, S, Tomizawa, T, Kobayashi, N, Tochio, N, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-11-29
Release date:2004-05-29
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR solution structures of actin depolymerizing factor homology domains.
Protein Sci., 18, 2009
6QV7
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BU of 6qv7 by Molmil
Crystal structure of a CHAD domain from Chlorobium tepidum
Descriptor: 1,2-ETHANEDIOL, ISOPROPYL ALCOHOL, SULFATE ION, ...
Authors:Lorenzo-Orts, L, Hothorn, M.
Deposit date:2019-03-01
Release date:2019-05-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Molecular characterization of CHAD domains as inorganic polyphosphate-binding modules.
Life Sci Alliance, 2, 2019
3ONL
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BU of 3onl by Molmil
yeast Ent3_ENTH-Vti1p_Habc complex structure
Descriptor: Epsin-3, t-SNARE VTI1
Authors:Wang, J, Fang, P, Niu, L, Teng, M.
Deposit date:2010-08-29
Release date:2011-07-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Epsin N-terminal homology domains bind on opposite sides of two SNAREs
Proc.Natl.Acad.Sci.USA, 108, 2011
6QZ9
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BU of 6qz9 by Molmil
The cryo-EM structure of the collar complex and tail axis in bacteriophage phi29
Descriptor: Portal protein, Pre-neck appendage protein, Proximal tail tube connector protein
Authors:Xu, J, Wang, D, Gui, M, Xiang, Y.
Deposit date:2019-03-11
Release date:2019-06-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural assembly of the tailed bacteriophage φ29.
Nat Commun, 10, 2019
3ONK
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BU of 3onk by Molmil
yeast Ent3_ENTH domain
Descriptor: Epsin-3
Authors:Wang, J, Fang, P, Niu, L, Teng, M.
Deposit date:2010-08-29
Release date:2011-07-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Epsin N-terminal homology domains bind on opposite sides of two SNAREs
Proc.Natl.Acad.Sci.USA, 108, 2011
7UWS
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BU of 7uws by Molmil
Atomic model of the partial VSV nucleocapsid
Descriptor: Matrix protein, Nucleoprotein, RNA
Authors:Zhou, K, Si, Z, Ge, P, Tsao, J, Luo, M, Zhou, Z.H.
Deposit date:2022-05-03
Release date:2022-09-28
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:Atomic model of vesicular stomatitis virus and mechanism of assembly.
Nat Commun, 13, 2022
6QVA
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BU of 6qva by Molmil
Crystal structure of a CHAD domain from Chlorobium tepidum in complex with inorganic polyphosphate
Descriptor: 1,2-ETHANEDIOL, CHAD domain, PHOSPHATE ION, ...
Authors:Lorenzo-Orts, L, Hothorn, M.
Deposit date:2019-03-01
Release date:2019-05-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Molecular characterization of CHAD domains as inorganic polyphosphate-binding modules.
Life Sci Alliance, 2, 2019

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