Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 52230 件

8U5L
DownloadVisualize
BU of 8u5l by Molmil
MAU868, a novel human-derived monoclonal neutralizing antibody targeting BK virus VP1
分子名称: Capsid protein VP1, scFv fragment of the monoclonal antibody MAU868
著者Knapp, M.S, Ornelas, E.
登録日2023-09-12
公開日2024-08-14
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Nonclinical and clinical characterization of MAU868, a novel human-derived monoclonal neutralizing antibody targeting BK polyomavirus VP1.
Am J Transplant, 2024
8GYR
DownloadVisualize
BU of 8gyr by Molmil
Crystal structure of a variable region segment of Leptospira host-interacting outer surface protein, LigA
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Kumar, P, Akif, M.
登録日2022-09-23
公開日2023-06-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Crystal structure of a variable region segment of Leptospira host-interacting outer surface protein, LigA, reveals the orientation of Ig-like domains.
Int.J.Biol.Macromol., 244, 2023
8H1D
DownloadVisualize
BU of 8h1d by Molmil
Solid-state NMR Structure of Aquaporin Z in its Native Cellular Membranes
分子名称: Aquaporin Z
著者Xie, H, Zhao, Y, Zhao, W, Chen, Y, Liu, M, Yang, J.
登録日2022-10-02
公開日2022-11-09
最終更新日2024-05-15
実験手法SOLID-STATE NMR
主引用文献Solid-state NMR structure determination of a membrane protein in E. coli cellular inner membrane.
Sci Adv, 9, 2023
8H2I
DownloadVisualize
BU of 8h2i by Molmil
Near-atomic structure of five-fold averaged PBCV-1 capsid
分子名称: MCPv1, MCPv2, MCPv3, ...
著者Shao, Q, Agarkova, I.V, Noel, E.A, Dunigan, D.D, Liu, Y, Wang, A, Guo, M, Xie, L, Zhao, X, Rossmann, M.G, Van Etten, J.L, Klose, T, Fang, Q.
登録日2022-10-06
公開日2022-11-16
最終更新日2023-09-06
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Near-atomic, non-icosahedrally averaged structure of giant virus Paramecium bursaria chlorella virus 1.
Nat Commun, 13, 2022
6QYQ
DownloadVisualize
BU of 6qyq by Molmil
Crystal structure of human thymidylate synthase (hTS) variant R175C
分子名称: CHLORIDE ION, N-[4-({[(6S)-2-amino-5-formyl-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid, SULFATE ION, ...
著者Pozzi, C, Mangani, M.
登録日2019-03-09
公開日2019-04-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural and Functional Characterization of the Human Thymidylate Synthase (hTS) Interface Variant R175C, New Perspectives for the Development of hTS Inhibitors.
Molecules, 24, 2019
5YP4
DownloadVisualize
BU of 5yp4 by Molmil
Crystal structure of dipeptidyl peptidase IV (DPP IV) with Lys-Pro from Pseudoxanthomonas mexicana WO24
分子名称: Dipeptidyl aminopeptidase 4, GLYCEROL, LYSINE, ...
著者Roppongi, S, Suzuki, Y, Tateoka, C, Fuimoto, M, Morisawa, S, Iizuka, I, Nakamura, A, Honma, N, Shida, Y, Ogasawara, W, Tanaka, N, Sakamoto, Y, Nonaka, T.
登録日2017-11-01
公開日2018-02-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of a bacterial dipeptidyl peptidase IV reveal a novel substrate recognition mechanism distinct from that of mammalian orthologues.
Sci Rep, 8, 2018
5YQX
DownloadVisualize
BU of 5yqx by Molmil
Crystal Structure Analysis of the BRD4
分子名称: (2R)-2-(cyclopropylmethyl)-7-(3,5-dimethyl-1,2-oxazol-4-yl)-4H-1,4-benzoxazin-3-one, 1,2-ETHANEDIOL, Bromodomain-containing protein 4, ...
著者Xue, X, Zhang, Y, Wang, C, Song, M.
登録日2017-11-08
公開日2018-11-28
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Benzoxazinone-containing 3,5-dimethylisoxazole derivatives as BET bromodomain inhibitors for treatment of castration-resistant prostate cancer.
Eur.J.Med.Chem., 152, 2018
8GZ5
DownloadVisualize
BU of 8gz5 by Molmil
Crystal structure of neutralizing VHH P17 in complex with SARS-CoV-2 Alpha variant spike receptor-binding domain
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody P17, ...
著者Yamaguchi, K, Anzai, I, Maeda, R, Moriguchi, M, Watanabe, T, Imura, A, Takaori-Kondo, A, Inoue, T.
登録日2022-09-25
公開日2022-12-07
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural insights into the rational design of a nanobody that binds with high affinity to the SARS-CoV-2 spike variant.
J.Biochem., 173, 2023
8GZ6
DownloadVisualize
BU of 8gz6 by Molmil
Crystal structure of neutralizing VHH P17 in complex with SARS-CoV-2 Alpha variant spike receptor-binding domain
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Nanobody P17
著者Yamaguchi, K, Anzai, I, Maeda, R, Moriguchi, M, Watanabe, T, Imura, A, Takaori-Kondo, A, Inoue, T.
登録日2022-09-25
公開日2022-12-07
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural insights into the rational design of a nanobody that binds with high affinity to the SARS-CoV-2 spike variant.
J.Biochem., 173, 2023
8H5E
DownloadVisualize
BU of 8h5e by Molmil
Crystal structure of the MgtE TM domain in complex with Ca2+ ions at 2.5 angstrom resolution
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CALCIUM ION, Magnesium transporter MgtE
著者Teng, X, Sheng, D, Hattori, M.
登録日2022-10-13
公開日2022-12-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Ion selectivity mechanism of the MgtE channel for Mg 2+ over Ca 2 .
Iscience, 25, 2022
5YT9
DownloadVisualize
BU of 5yt9 by Molmil
Crystal structure of H5 hemagglutinin G228S mutant from A/chicken/Taiwan/0502/2012
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
著者Lin, T.H, Lee, M.S, Wu, W.G, Liu, J.S.
登録日2017-11-17
公開日2018-11-21
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.766 Å)
主引用文献crystal structure of H5 hemagglutinin from A/chicken/Taiwan/0502/2012
To Be Published
3AGR
DownloadVisualize
BU of 3agr by Molmil
Crystal structure of nucleoside triphosphate hydrolases from Neospora caninum
分子名称: Nucleoside triphosphate hydrolase
著者Matoba, K, Shiba, T, Seiki, M, Asai, T, Harada, S.
登録日2010-04-06
公開日2011-04-06
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of nucleoside triphosphate hydrolases from Neospora caninum
To be Published
3OM9
DownloadVisualize
BU of 3om9 by Molmil
T. Gondii bradyzoite-specific LDH (LDH1) in complex with NAD and OXQ
分子名称: 4-HYDROXY-1,2,5-OXADIAZOLE-3-CARBOXYLIC ACID, Lactate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Susko, M.S, Wilson, D.K.
登録日2010-08-26
公開日2010-10-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献T.Gondii bradyzoite-specific LDH (LDH1) in complex with NAD and OXQ
To be Published
7CLV
DownloadVisualize
BU of 7clv by Molmil
Solution structure of mitochondrial Tim23 channel in complex with a signaling peptide
分子名称: COX4 isoform 1, TIM23 isoform 1
著者Zhou, S, Ruan, M.S, Li, Y.Y, Yang, J, Richter, C, Schwalbe, H, Shen, B, Wang, J.F.
登録日2020-07-22
公開日2020-12-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of the voltage-gated Tim23 channel in complex with a mitochondrial presequence peptide.
Cell Res., 31, 2021
8H99
DownloadVisualize
BU of 8h99 by Molmil
Crystal structure of E. coli ThrS catalytic domain mutant
分子名称: ADENOSINE-5'-TRIPHOSPHATE, IMIDAZOLE, MAGNESIUM ION, ...
著者Qiao, H, Xia, M, Wang, J, Fang, P.
登録日2022-10-25
公開日2023-02-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Tyrosine-targeted covalent inhibition of a tRNA synthetase aided by zinc ion.
Commun Biol, 6, 2023
8H9C
DownloadVisualize
BU of 8h9c by Molmil
Crystal structure of chemically modified E. coli ThrS catalytic domain 4
分子名称: N-(2,3-dihydroxybenzoyl)-4-(4-nitrophenyl)-L-threonine, Threonine--tRNA ligase, ZINC ION
著者Qiao, H, Xia, M, Wang, J, Fang, P.
登録日2022-10-25
公開日2023-02-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Tyrosine-targeted covalent inhibition of a tRNA synthetase aided by zinc ion.
Commun Biol, 6, 2023
8HJB
DownloadVisualize
BU of 8hjb by Molmil
Crystal structure of Pseudomonas aeruginosa PvrA with coenzyme A
分子名称: COENZYME A, TetR family transcriptional regulator
著者Liang, H, Bartlam, M.
登録日2022-11-23
公開日2023-02-08
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Regulatory and structural mechanisms of PvrA-mediated regulation of the PQS quorum-sensing system and PHA biosynthesis in Pseudomonas aeruginosa.
Nucleic Acids Res., 51, 2023
8H98
DownloadVisualize
BU of 8h98 by Molmil
Crystal structure of chemically modified E. coli ThrS catalytic domain 1
分子名称: N-(2,3-dihydroxybenzoyl)-4-(4-nitrophenyl)-L-threonine, Threonine--tRNA ligase, ZINC ION
著者Qiao, H, Xia, M, Wang, J, Fang, P.
登録日2022-10-25
公開日2023-02-08
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Tyrosine-targeted covalent inhibition of a tRNA synthetase aided by zinc ion.
Commun Biol, 6, 2023
8H9B
DownloadVisualize
BU of 8h9b by Molmil
Crystal structure of chemically modified E. coli ThrS catalytic domain 3
分子名称: N-(2,3-dihydroxybenzoyl)-4-(4-nitrophenyl)-L-threonine, Threonine--tRNA ligase, ZINC ION
著者Qiao, H, Xia, M, Wang, J, Fang, P.
登録日2022-10-25
公開日2023-02-08
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Tyrosine-targeted covalent inhibition of a tRNA synthetase aided by zinc ion.
Commun Biol, 6, 2023
7CW3
DownloadVisualize
BU of 7cw3 by Molmil
Cryo-EM structure of Chikungunya virus in complex with mAb CHK-263 IgG (subregion around icosahedral 2-fold vertex)
分子名称: Capsid protein, E1 glycoprotein, E2 glycoprotein, ...
著者Zhou, Q.F, Fox, J.M, Earnest, J.T, Ng, T.S, Kim, A.S, Fibriansah, G, Kostyuchenko, V.A, Shu, B, Diamond, M.S, Lok, S.M.
登録日2020-08-27
公開日2020-11-04
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (9.4 Å)
主引用文献Structural basis of Chikungunya virus inhibition by monoclonal antibodies.
Proc.Natl.Acad.Sci.USA, 117, 2020
8H1P
DownloadVisualize
BU of 8h1p by Molmil
Cryo-EM structure of the human RAD52 protein
分子名称: DNA repair protein RAD52 homolog
著者Kinoshita, C, Takizawa, Y, Saotome, M, Ogino, S, Kurumizaka, H, Kagawa, W.
登録日2022-10-03
公開日2023-02-08
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.48 Å)
主引用文献The cryo-EM structure of full-length RAD52 protein contains an undecameric ring.
Febs Open Bio, 13, 2023
8GYH
DownloadVisualize
BU of 8gyh by Molmil
Crystal structure of Fic25 (apo form) from Streptomyces ficellus
分子名称: DegT/DnrJ/EryC1/StrS family aminotransferase, GLYCEROL, IMIDAZOLE
著者Kurosawa, S, Yoshida, A, Tomita, T, Nishiyama, M.
登録日2022-09-22
公開日2023-02-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mechanisms of Sugar Aminotransferase-like Enzymes to Synthesize Stereoisomers of Non-proteinogenic Amino Acids in Natural Product Biosynthesis.
Acs Chem.Biol., 18, 2023
8H9A
DownloadVisualize
BU of 8h9a by Molmil
Crystal structure of chemically modified E. coli ThrS catalytic domain 2
分子名称: N-(2,3-dihydroxybenzoyl)-4-(4-nitrophenyl)-L-threonine, Threonine--tRNA ligase, ZINC ION
著者Qiao, H, Xia, M, Wang, J, Fang, P.
登録日2022-10-25
公開日2023-02-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Tyrosine-targeted covalent inhibition of a tRNA synthetase aided by zinc ion.
Commun Biol, 6, 2023
7COI
DownloadVisualize
BU of 7coi by Molmil
Crystal structure of the b-carbonic anhydrase CafA of the fungal pathogen Aspergillus fumigatus
分子名称: ACETATE ION, Carbonic anhydrase, ZINC ION
著者Jin, M.S, Kim, S, Yeon, J, Sung, J.
登録日2020-08-04
公開日2020-10-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of beta-Carbonic Anhydrase CafA from the Fungal Pathogen Aspergillus fumigatus .
Mol.Cells, 43, 2020
8H70
DownloadVisualize
BU of 8h70 by Molmil
Crystal structure of the catalytic ATP-binding domain of the PhoR sensor histidine kinase from Vibrio cholera
分子名称: DI(HYDROXYETHYL)ETHER, Phosphate regulon sensor protein PhoR
著者Jia, R, Zhao, W, Hattori, M.
登録日2022-10-18
公開日2023-02-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Crystal structure of the catalytic ATP-binding domain of the PhoR sensor histidine kinase.
Proteins, 91, 2023

227111

件を2024-11-06に公開中

PDB statisticsPDBj update infoContact PDBjnumon