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PDB: 51630 件

6DXU
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Crystal Structure of Parabacteroides merdae Beta-Glucuronidase (GUS)
分子名称: BICINE, Glycosyl hydrolase family 2, TIM barrel domain protein, ...
著者Little, M.S, Redinbo, M.R.
登録日2018-06-30
公開日2019-02-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Active site flexibility revealed in crystal structures of Parabacteroides merdae beta-glucuronidase from the human gut microbiome.
Protein Sci., 27, 2018
4QMD
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Crystal structure of human envoplakin plakin repeat domain
分子名称: Envoplakin
著者Mohammed, F, Al-Jassar, C, White, S.A, Fogl, C, Jeeves, M, Knowles, T.J, Odinstova, E, Rodriguez-Zamora, P, Overduin, M, Chidgey, M.
登録日2014-06-16
公開日2015-07-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.601 Å)
主引用文献Mechanism of intermediate filament recognition by plakin repeat domains revealed by envoplakin targeting of vimentin.
Nat Commun, 7, 2016
4PPN
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Mycobacterium tuberculosis RecA citrate bound low temperature structure IIA-BN
分子名称: 1,2-ETHANEDIOL, CITRATE ANION, Protein RecA, ...
著者Chandran, A.V, Prabu, J.R, Patil, N.K, Muniyappa, K, Vijayan, M.
登録日2014-02-27
公開日2015-03-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural studies on Mycobacterium tuberculosis RecA: Molecular plasticity and interspecies variability
J.Biosci., 40, 2015
3DHJ
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BU of 3dhj by Molmil
Beta 2 microglobulin mutant W60C
分子名称: Beta-2-microglobulin
著者Ricagno, S, Colombo, M, de Rosa, M, Bolognesi, M, Giorgetti, S, Bellotti, V.
登録日2008-06-18
公開日2008-11-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献DE loop mutations affect beta2-microglobulin stability and amyloid aggregation
Biochem.Biophys.Res.Commun., 377, 2008
4PO9
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Mycobacterium tuberculosis RecA glycerol bound low temperature structure IIC-BR
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Protein RecA, ...
著者Chandran, A.V, Prabu, J.R, Patil, N.K, Muniyappa, K, Vijayan, M.
登録日2014-02-25
公開日2015-03-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural studies on Mycobacterium tuberculosis RecA: Molecular plasticity and interspecies variability
J.Biosci., 40, 2015
1BBZ
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BU of 1bbz by Molmil
CRYSTAL STRUCTURE OF THE ABL-SH3 DOMAIN COMPLEXED WITH A DESIGNED HIGH-AFFINITY PEPTIDE LIGAND: IMPLICATIONS FOR SH3-LIGAND INTERACTIONS
分子名称: ABL TYROSINE KINASE, PEPTIDE P41, SULFATE ION
著者Pisabarro, M.T, Serrano, L, Wilmanns, M.
登録日1998-04-28
公開日1998-11-25
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of the abl-SH3 domain complexed with a designed high-affinity peptide ligand: implications for SH3-ligand interactions.
J.Mol.Biol., 281, 1998
4PSV
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BU of 4psv by Molmil
Mycobacterium tuberculosis RecA phosphate bound room temperature structure I-RT
分子名称: PHOSPHATE ION, Protein RecA, 1st part, ...
著者Chandran, A.V, Prabu, J.R, Patil, N.K, Muniyappa, K, Vijayan, M.
登録日2014-03-08
公開日2015-03-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural studies on Mycobacterium tuberculosis RecA: Molecular plasticity and interspecies variability
J.Biosci., 40, 2015
1BDA
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BU of 1bda by Molmil
CATALYTIC DOMAIN OF HUMAN SINGLE CHAIN TISSUE PLASMINOGEN ACTIVATOR IN COMPLEX WITH DANSYL-EGR-CMK (DANSYL-GLU-GLY-ARG CHLOROMETHYL KETONE)
分子名称: N-{[5-(dimethylamino)naphthalen-2-yl]sulfonyl}-L-alpha-glutamyl-N-[(1S)-4-{[amino(iminio)methyl]amino}-1-(chloroacetyl) butyl]glycinamide, SINGLE CHAIN TISSUE TYPE PLASMINOGEN ACTIVATOR
著者Bode, W, Renatus, M, Engh, R.A.
登録日1998-05-07
公開日1999-05-11
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Lysine 156 promotes the anomalous proenzyme activity of tPA: X-ray crystal structure of single-chain human tPA.
EMBO J., 16, 1997
4PO1
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Mycobacterium tuberculosis RecA glycerol bound room temperature structure IIC-RT
分子名称: GLYCEROL, Protein RecA
著者Chandran, A.V, Prabu, J.R, Patil, N.K, Muniyappa, K, Vijayan, M.
登録日2014-02-23
公開日2015-03-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structural studies on Mycobacterium tuberculosis RecA: Molecular plasticity and interspecies variability
J.Biosci., 40, 2015
4POA
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Mycobacterium tuberculosis RecA glycerol bound low temperature structure IIC-BN
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Protein RecA, ...
著者Chandran, A.V, Prabu, J.R, Patil, N.K, Muniyappa, K, Vijayan, M.
登録日2014-02-25
公開日2015-03-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structural studies on Mycobacterium tuberculosis RecA: Molecular plasticity and interspecies variability
J.Biosci., 40, 2015
1B2V
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BU of 1b2v by Molmil
HEME-BINDING PROTEIN A
分子名称: CALCIUM ION, PROTEIN (HEME-BINDING PROTEIN A), PROTOPORPHYRIN IX CONTAINING FE
著者Arnoux, P, Haser, R, Izadi, N, Lecroisey, A, Wandersma, N.C, Czjzek, M.
登録日1998-12-01
公開日1999-06-24
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The crystal structure of HasA, a hemophore secreted by Serratia marcescens.
Nat.Struct.Biol., 6, 1999
3ELU
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BU of 3elu by Molmil
Wesselsbron virus Methyltransferase in complex with AdoMet
分子名称: Methyltransferase, S-ADENOSYLMETHIONINE, SULFATE ION
著者Bollati, M, Ricagno, S, Milani, M, Mastrangelo, E, Bolognesi, M.
登録日2008-09-23
公開日2008-11-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Recognition of RNA Cap in the Wesselsbron Virus NS5 Methyltransferase Domain: Implications for RNA-Capping Mechanisms in Flavivirus
J.Mol.Biol., 385, 2009
3EMD
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BU of 3emd by Molmil
Wesselsbron virus Methyltransferase in complex with Sinefungin and 7MeGpppA
分子名称: P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, SINEFUNGIN, SULFATE ION, ...
著者Bollati, M, Milani, M, Ricagno, S, Mastrangelo, E, Bolognesi, M.
登録日2008-09-24
公開日2008-11-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Recognition of RNA Cap in the Wesselsbron Virus NS5 Methyltransferase Domain: Implications for RNA-Capping Mechanisms in Flavivirus
J.Mol.Biol., 385, 2009
5WIS
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BU of 5wis by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution
分子名称: (3R,4S,5S,7R,9E,11S,12R)-12-ethyl-11-hydroxy-3,5,7,11-tetramethyl-2,8-dioxooxacyclododec-9-en-4-yl 3,4,6-trideoxy-3-(dimethylamino)-beta-D-xylo-hexopyranoside, 16S Ribosomal RNA, 23S ribosomal RNA, ...
著者Almutairi, M.M, Svetlov, M.S, Hansen, D.A, Khabibullina, N.F, Klepacki, D, Kang, H.Y, Sherman, D.H, Vazquez-Laslop, N, Polikanov, Y.S, Mankin, A.S.
登録日2017-07-20
公開日2018-02-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.703 Å)
主引用文献Co-produced natural ketolides methymycin and pikromycin inhibit bacterial growth by preventing synthesis of a limited number of proteins.
Nucleic Acids Res., 45, 2017
3C0Z
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BU of 3c0z by Molmil
Crystal structure of catalytic domain of human histone deacetylase HDAC7 in complex with SAHA
分子名称: Histone deacetylase 7a, OCTANEDIOIC ACID HYDROXYAMIDE PHENYLAMIDE, POTASSIUM ION, ...
著者Min, J, Schuetz, A, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
登録日2008-01-21
公開日2008-02-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Human HDAC7 harbors a class IIa histone deacetylase-specific zinc binding motif and cryptic deacetylase activity.
J.Biol.Chem., 283, 2008
7Z67
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Crystal structure of the tandem kinase & triphosphate tunnel metalloenzyme domain module of the TTM1 protein from Arabidoposis thaliana in complex with a adenosine nucleotide analog.
分子名称: 1,2-ETHANEDIOL, CITRIC ACID, Inorganic pyrophosphatase TTM1, ...
著者Hothorn, M, Martinez, J.
登録日2022-03-11
公開日2022-03-23
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural and biological insight into the plant unique multimodular triphosphosphate tunnel metalloenzymes of Arabidopsis thaliana
To Be Published
3BUZ
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BU of 3buz by Molmil
Crystal structure of ia-bTAD-actin complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Tsuge, H, Nagahama, M, Oda, M, Iwamoto, S, Utsunomiya, H, Marquez, V.E, Katunuma, N, Nishizawa, M, Sakurai, J.
登録日2008-01-04
公開日2008-05-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Structural basis of actin recognition and arginine ADP-ribosylation by Clostridium perfringens iota-toxin
Proc.Natl.Acad.Sci.Usa, 105, 2008
7Z66
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Crystal structure of the tandem kinase & triphosphate tunnel metalloenzyme domain module of the TTM1 protein from Arabidoposis thaliana in complex with inorganic phosphate and citric acid.
分子名称: 1,2-ETHANEDIOL, CITRIC ACID, Inorganic pyrophosphatase TTM1, ...
著者Hothorn, M, Martinez, J.
登録日2022-03-11
公開日2022-04-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and biological insight into the plant unique multimodular triphosphosphate tunnel metalloenzymes of Arabidopsis thaliana
To Be Published
4QNY
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BU of 4qny by Molmil
Crystal structure of MapK from Leishmania donovani, LDBPK_331470
分子名称: GLYCEROL, MAGNESIUM ION, Mitogen activated protein kinase, ...
著者Wernimont, A.K, Loppnau, P, Walker, J.R, Mangos, M, El Bakkouri, M, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Hui, R, Amani, M, Structural Genomics Consortium (SGC)
登録日2014-06-18
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.257 Å)
主引用文献Crystal structure of MapK from Leishmania donovani, LDBPK_331470
TO BE PUBLISHED
7Z45
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Central part (C10) of bacteriophage SU10 capsid
分子名称: Major head protein
著者Siborova, M, Fuzik, T, Prochazkova, M, Novacek, J, Plevka, P.
登録日2022-03-03
公開日2022-08-24
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Tail proteins of phage SU10 reorganize into the nozzle for genome delivery.
Nat Commun, 13, 2022
7Z46
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BU of 7z46 by Molmil
Top part (C5) of bacteriophage SU10 capsid
分子名称: Major head protein
著者Siborova, M, Fuzik, T, Prochazkova, M, Novacek, J, Plevka, P.
登録日2022-03-03
公開日2022-08-24
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Tail proteins of phage SU10 reorganize into the nozzle for genome delivery.
Nat Commun, 13, 2022
4N4A
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BU of 4n4a by Molmil
Cystal structure of Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
分子名称: Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
著者Smietanski, M, Werener, M, Purta, E, Kaminska, K.H, Stepinski, J, Darzynkiewicz, E, Nowotny, M, Bujnicki, J.M.
登録日2013-10-08
公開日2014-01-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural analysis of human 2'-O-ribose methyltransferases involved in mRNA cap structure formation.
Nat Commun, 5, 2014
7Z4E
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BU of 7z4e by Molmil
SpCas9 bound to 8-nucleotide complementary DNA substrate
分子名称: CRISPR-associated endonuclease Cas9/Csn1, Non-target strand of 8 nucleotide complementary DNA substrate, Target strand of 8 nucleotide complementary DNA substrate, ...
著者Pacesa, M, Jinek, M.
登録日2022-03-03
公開日2022-08-31
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (4.14 Å)
主引用文献R-loop formation and conformational activation mechanisms of Cas9.
Nature, 609, 2022
7Z4I
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SpCas9 bound to 16-nucleotide complementary DNA substrate
分子名称: CRISPR-associated endonuclease Cas9/Csn1, Non-target strand of 16-nucleotide complementary DNA substrate, POTASSIUM ION, ...
著者Pacesa, M, Jinek, M.
登録日2022-03-03
公開日2022-08-31
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献R-loop formation and conformational activation mechanisms of Cas9.
Nature, 609, 2022
7Z4C
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SpCas9 bound to 6 nucleotide complementary DNA substrate
分子名称: CRISPR-associated endonuclease Cas9/Csn1, Non-target strand of 6 nucleotide complementary DNA substrate, Target strand of 6 nucleotide complementary DNA substrate, ...
著者Pacesa, M, Jinek, M.
登録日2022-03-03
公開日2022-08-31
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.87 Å)
主引用文献R-loop formation and conformational activation mechanisms of Cas9.
Nature, 609, 2022

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件を2024-08-28に公開中

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