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PDB: 51630 件

6ZDV
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Crystal structure of stabilized A2A adenosine receptor A2AR-StaR2-bRIL in complex with Chromone 5d
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Adenosine receptor A2a,Soluble cytochrome b562,Adenosine receptor A2a, ...
著者Verdon, G, Jespers, W, Azuaje, J, Majellaro, M, Keranen, H, Garcia-mera, X, Congreve, M, Deflorian, F, de Graaf, C, Zhukov, A, Dore, A, Mason, J, Aqvist, J, Cooke, R, Sotelo, E, Gutierrez-de-Teran, H.
登録日2020-06-15
公開日2020-09-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献X-Ray Crystallography and Free Energy Calculations Reveal the Binding Mechanism of A 2A Adenosine Receptor Antagonists.
Angew.Chem.Int.Ed.Engl., 59, 2020
6QMI
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Phosphopantetheine adenylyltransferase from Mycobacterium tuberculosis in complex with 3-(1H-indol-1-yl)propanoic acid at 1.7A resolution.
分子名称: 5-methyl-1-phenyl-pyrazole-4-carboxylic acid, Phosphopantetheine adenylyltransferase
著者Blaszczyk, M, Blundell, T.L.
登録日2019-02-07
公開日2020-02-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.781 Å)
主引用文献Fragment linking applied to the discovery of Mycobacterium tuberculosis phosphopantetheine adenylyltransferase inhibitors
To Be Published
5Z2I
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Structure of Dictyostelium discoideum mitochondrial calcium uniporter N-ternimal domain (Se-DdMCU-NTD)
分子名称: Dictyostelium discoideum mitochondrial calcium uniporter
著者Yuan, Y, Wen, M, Chou, J, Li, D, Bo, O.
登録日2018-01-02
公開日2019-01-02
最終更新日2020-07-15
実験手法X-RAY DIFFRACTION (2.141 Å)
主引用文献Structural Characterization of the N-Terminal Domain of theDictyostelium discoideumMitochondrial Calcium Uniporter.
Acs Omega, 5, 2020
5HMB
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Crystal structure of S. sahachiroi AziG
分子名称: Azi13, SULFATE ION
著者Erb, M.S, Zhang, Y, Ealick, S.E.
登録日2016-01-15
公開日2016-02-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.151 Å)
主引用文献Polyketide Ring Expansion Mediated by a Thioesterase, Chain Elongation and Cyclization Domain, in Azinomycin Biosynthesis: Characterization of AziB and AziG.
Biochemistry, 55, 2016
4MY8
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Crystal Structure of the Inosine 5'-monophosphate Dehydrogenase with an Internal Deletion of the CBS Domain from Bacillus anthracis str. Ames complexed with inhibitor Q21
分子名称: (2S)-2-(naphthalen-1-yloxy)-N-[2-(pyridin-4-yl)-1,3-benzoxazol-5-yl]propanamide, 1,2-ETHANEDIOL, ACETIC ACID, ...
著者Kim, Y, Makowska-Grzyska, M, Gu, M, Gorla, S.K, Kavitha, M, Cuny, G, Hedstrom, L, Anderson, W.F, Joachimiak, A, CSGID, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2013-09-27
公開日2013-11-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2924 Å)
主引用文献Crystal Structure of the Inosine 5'-monophosphate Dehydrogenase with an Internal Deletion of the CBS Domain from Bacillus anthracis str. Ames complexed with inhibitor Q21
To be Published, 2013
8QUC
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Cryo-EM Structure of Human Kv3.1 in Complex with Modulator AUT1
分子名称: (5R)-5-ethyl-3-[6-(3-methoxy-4-methyl-phenoxy)pyridin-3-yl]imidazolidine-2,4-dione, 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE, CHOLESTEROL HEMISUCCINATE, ...
著者Chi, G, Mckinley, G, Marsden, B, Pike, A.C.W, Ye, M, Brooke, L.M, Bakshi, S, Pilati, N, Marasco, A, Gunthorpe, M, Alvaro, G, Large, C, Lakshminaraya, B, Williams, E, Sauer, D.B.
登録日2023-10-16
公開日2024-04-03
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献The binding and mechanism of a positive allosteric modulator of Kv3 channels.
Nat Commun, 15, 2024
5ZH5
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CRYSTAL STRUCTURE OF PfKRS WITH INHIBITOR CLADO-2
分子名称: (3S)-6,8-dihydroxy-3-{[(2R,6S)-6-methyloxan-2-yl]methyl}-3,4-dihydro-1H-2-benzopyran-1-one, CHLORIDE ION, LYSINE, ...
著者Babbar, P, Malhotra, N, Sharma, M, Harlos, K, Reddy, D.S, Manickam, Y, Sharma, A.
登録日2018-03-11
公開日2018-06-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.08 Å)
主引用文献Specific Stereoisomeric Conformations Determine the Drug Potency of Cladosporin Scaffold against Malarial Parasite
J. Med. Chem., 61, 2018
4N49
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Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 Protein in complex with m7GpppG and SAM
分子名称: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1, S-ADENOSYLMETHIONINE, ...
著者Smietanski, M, Werener, M, Purta, E, Kaminska, K.H, Stepinski, J, Darzynkiewicz, E, Nowotny, M, Bujnicki, J.M.
登録日2013-10-08
公開日2014-01-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural analysis of human 2'-O-ribose methyltransferases involved in mRNA cap structure formation.
Nat Commun, 5, 2014
3DHM
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Beta 2 microglobulin mutant D59P
分子名称: Beta-2-microglobulin
著者Ricagno, S, Colombo, M, de Rosa, M, Bolognesi, M, Giorgetti, S, Bellotti, V.
登録日2008-06-18
公開日2008-11-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献DE loop mutations affect beta2-microglobulin stability and amyloid aggregation
Biochem.Biophys.Res.Commun., 377, 2008
5ZN1
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X-ray structure of protein kinase ck2 alpha subunit in D2O
分子名称: Casein kinase II subunit alpha, SULFATE ION
著者Shibazaki, C, Arai, S, Shimizu, R, Kinoshita, T, Kuroki, R, Adachi, M.
登録日2018-04-07
公開日2018-11-21
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Hydration Structures of the Human Protein Kinase CK2 alpha Clarified by Joint Neutron and X-ray Crystallography.
J. Mol. Biol., 430, 2018
5ZN5
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X-ray structure of protein kinase ck2 alpha subunit H148A mutant
分子名称: Casein kinase II subunit alpha, SULFATE ION
著者Shibazaki, C, Arai, S, Shimizu, R, Kinoshita, T, Kuroki, R, Adachi, M.
登録日2018-04-07
公開日2018-11-21
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Hydration Structures of the Human Protein Kinase CK2 alpha Clarified by Joint Neutron and X-ray Crystallography.
J. Mol. Biol., 430, 2018
8QQU
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Asymetric subunit of E. coli DNA gyrase bound to a linear part of a DNA minicircle
分子名称: DNA (16-MER), DNA gyrase subunit A, DNA gyrase subunit B
著者Vayssieres, M, Lamour, V.
登録日2023-10-06
公開日2024-04-10
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis of DNA crossover capture by Escherichia coli DNA gyrase.
Science, 384, 2024
5ZOK
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Crystal structure of human SMAD1-MAN1 complex.
分子名称: Inner nuclear membrane protein Man1, Mothers against decapentaplegic homolog 1
著者Miyazono, K, Ito, T, Tanokura, M.
登録日2018-04-13
公開日2018-10-17
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural basis for receptor-regulated SMAD recognition by MAN1
Nucleic Acids Res., 46, 2018
8QAW
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Medicago truncatula HISN5 (IGPD) in complex with MN, IMD, EDO, FMT, GOL and TRS
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
著者Witek, W, Ruszkowski, M.
登録日2023-08-23
公開日2024-04-10
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Targeting imidazole-glycerol phosphate dehydratase in plants: novel approach for structural and functional studies, and inhibitor blueprinting.
Front Plant Sci, 15, 2024
8QAX
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Medicago truncatula HISN5 (IGPD) in complex with MN, FMT, GOL and TRS
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FORMIC ACID, GLYCEROL, ...
著者Witek, W, Ruszkowski, M.
登録日2023-08-23
公開日2024-04-10
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Targeting imidazole-glycerol phosphate dehydratase in plants: novel approach for structural and functional studies, and inhibitor blueprinting.
Front Plant Sci, 15, 2024
6BOW
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Human APE1 substrate complex with an T/T mismatch adjacent the THF
分子名称: 21-mer DNA, DNA-(apurinic or apyrimidinic site) lyase
著者Freudenthal, B.D, Whitaker, A.M, Fairlamb, M.S.
登録日2017-11-20
公開日2018-08-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Apurinic/apyrimidinic (AP) endonuclease 1 processing of AP sites with 5' mismatches.
Acta Crystallogr D Struct Biol, 74, 2018
1A11
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NMR STRUCTURE OF MEMBRANE SPANNING SEGMENT 2 OF THE ACETYLCHOLINE RECEPTOR IN DPC MICELLES, 10 STRUCTURES
分子名称: ACETYLCHOLINE RECEPTOR M2
著者Gesell, J.J, Sun, W, Montal, M, Opella, S.J.
登録日1997-12-19
公開日1998-04-08
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structures of the M2 channel-lining segments from nicotinic acetylcholine and NMDA receptors by NMR spectroscopy.
Nat.Struct.Biol., 6, 1999
8QG0
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Archaeoglobus fulgidus AfAgo complex with AfAgo-N protein (fAfAgo) bound with 17 nt RNA guide and 17 nt DNA target
分子名称: AfAgo-N protein, DNA target 17 nt, Piwi protein, ...
著者Manakova, E.N, Zaremba, M, Pocevicuite, R, Golovinas, E, Zagorskaite, E, Silanskas, A.
登録日2023-09-05
公開日2024-01-24
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.43 Å)
主引用文献The missing part: the Archaeoglobus fulgidus Argonaute forms a functional heterodimer with an N-L1-L2 domain protein.
Nucleic Acids Res., 52, 2024
8R5Q
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Structure of apo TDO with a bound inhibitor
分子名称: 3-chloranyl-~{N}-[(1~{S})-1-(6-chloranylpyridin-3-yl)-2-phenyl-ethyl]aniline, Tryptophan 2,3-dioxygenase, alpha-methyl-L-tryptophan
著者Wicki, M, Mac Sweeney, A.
登録日2023-11-17
公開日2024-01-17
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Discovery and binding mode of a small molecule inhibitor of the apo form of human TDO2
Biorxiv, 2024
6YT5
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Cryo-EM structure of T7 bacteriophage DNA translocation gp15-gp16 core complex intermediate assembly
分子名称: Internal virion protein gp15, Peptidoglycan transglycosylase gp16
著者Perez-Ruiz, M, Pulido-Cid, M, Luque-Ortega, J.R, Cuervo, A, Carrascosa, J.L.
登録日2020-04-23
公開日2021-09-08
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Assisted assembly of bacteriophage T7 core components for genome translocation across the bacterial envelope.
Proc.Natl.Acad.Sci.USA, 118, 2021
6YSZ
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Cryo-EM structure of T7 bacteriophage DNA translocation gp15 core protein intermediate assembly
分子名称: Internal virion protein gp15
著者Perez-Ruiz, M, Pulido-Cid, M, Luque-Ortega, J.R, Cuervo, A, Carrascosa, J.L.
登録日2020-04-23
公開日2021-09-08
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Assisted assembly of bacteriophage T7 core components for genome translocation across the bacterial envelope.
Proc.Natl.Acad.Sci.USA, 118, 2021
5Z3N
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Structure of large fragment of DNA Polymerase I from Thermus aquaticus Host-Guest complex with the unnatural base 5fC pair with dA
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*AP*AP*AP*CP*GP*GP*CP*GP*CP*CP*GP*(5FC)P*GP*GP*TP*C)-3'), DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DOC))-3'), ...
著者Zeng, H, Mondal, M, Song, R.Y, Zhang, J, Xia, B, Gao, Y.Q, Yi, C.Q.
登録日2018-01-08
公開日2018-11-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Unnatural Cytosine Bases Recognized as Thymines by DNA Polymerases by the Formation of the Watson-Crick Geometry.
Angew. Chem. Int. Ed. Engl., 58, 2019
5Z3W
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Malate dehydrogenase binds silver at C113
分子名称: Malate dehydrogenase, SILVER ION
著者Wang, H, Wang, M, Sun, H.
登録日2018-01-09
公開日2019-01-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Atomic differentiation of silver binding preference in protein targets: Escherichia coli malate dehydrogenase as a paradigm
Chem Sci, 2020
3AZ6
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Crystal structure of Co/T-HEWL
分子名称: CHLORIDE ION, COBALT (II) ION, GLYCEROL, ...
著者Abe, S, Tsujimoto, M, Yoneda, K, Ohba, M, Hikage, T, Takano, M, Kitagawa, S, Ueno, T.
登録日2011-05-20
公開日2012-05-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Porous protein crystals as reaction vessels for controlling magnetic properties of nanoparticles
Small, 8, 2012
6OWN
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Crystal structure of Msm DnaB1 intein splicing domain bound with zinc
分子名称: Replicative DNA helicase, ZINC ION
著者Bacot-Davis, V.R, Belfort, M, Lennon, C.
登録日2019-05-10
公開日2020-05-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Conditional DnaB Protein Splicing Is Reversibly Inhibited by Zinc in Mycobacteria.
Mbio, 11, 2020

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