Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 52161 件

1R0J
DownloadVisualize
BU of 1r0j by Molmil
nickel-substituted rubredoxin
分子名称: NICKEL (II) ION, Rubredoxin
著者Maher, M, Cross, M, Wilce, M.C.J, Guss, J.M, Wedd, A.G.
登録日2003-09-22
公開日2004-02-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Metal-substituted derivatives of the rubredoxin from Clostridium pasteurianum.
Acta Crystallogr.,Sect.D, 60, 2004
1QNS
DownloadVisualize
BU of 1qns by Molmil
The 3-D structure of a Trichoderma reesei b-mannanase from glycoside hydrolase family 5
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ENDO-1,4-B-D-MANNANASE, ...
著者Sabini, E, Schubert, H, Murshudov, G, Wilson, K.S, Siika-Aho, M, Penttila, M.
登録日1999-10-20
公開日2000-10-19
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The Three-Dimensional Structure of a Trichoderma Reesei Beta-Mannanase from Glycoside Hydrolase Family 5
Acta Crystallogr.,Sect.D, 56, 2000
1QZC
DownloadVisualize
BU of 1qzc by Molmil
Coordinates of S12, SH44, LH69 and SRL separately fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin) bound 70S ribosome
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S12
著者Valle, M, Zavialov, A, Li, W, Stagg, S.M, Sengupta, J, Nielsen, R.C, Nissen, P, Harvey, S.C, Ehrenberg, M, Frank, J.
登録日2003-09-16
公開日2003-11-04
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Incorporation of Aminoacyl-tRNA into the Ribosome as seen by Cryo-electron Microscopy
Nat.Struct.Biol., 10, 2003
2A38
DownloadVisualize
BU of 2a38 by Molmil
Crystal structure of the N-Terminus of titin
分子名称: CADMIUM ION, Titin
著者Marino, M, Muhle-Goll, C, Svergun, D, Demirel, M, Mayans, O.
登録日2005-06-24
公開日2006-06-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Ig doublet Z1Z2: a model system for the hybrid analysis of conformational dynamics in Ig tandems from titin
Structure, 14, 2006
5WR7
DownloadVisualize
BU of 5wr7 by Molmil
Crystal structure of Trk-A complexed with a selective inhibitor CH7057288
分子名称: High affinity nerve growth factor receptor, N-tert-butyl-2-[2-[6,6-dimethyl-8-(methylsulfonylamino)-11-oxidanylidene-naphtho[2,3-b][1]benzofuran-3-yl]ethynyl]-6-methyl-pyridine-4-carboxamide
著者Tanaka, H, Blaesse, M, Augustin, M, Goesser, C.
登録日2016-11-30
公開日2017-12-06
最終更新日2018-12-19
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Selective TRK Inhibitor CH7057288 against TRK Fusion-Driven Cancer.
Mol. Cancer Ther., 17, 2018
5WRB
DownloadVisualize
BU of 5wrb by Molmil
Crystal structure of hen egg-white lysozyme
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Sugahara, M, Suzuki, M, Masuda, T, Inoue, S, Nango, E.
登録日2016-12-01
公開日2017-12-20
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.013 Å)
主引用文献Hydroxyethyl cellulose matrix applied to serial crystallography
Sci Rep, 7, 2017
1QWY
DownloadVisualize
BU of 1qwy by Molmil
Latent LytM at 1.3 A resolution
分子名称: ZINC ION, peptidoglycan hydrolase
著者Odintsov, S.G, Sabala, I, Marcyjaniak, M, Bochtler, M.
登録日2003-09-03
公開日2004-01-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Latent LytM at 1.3A resolution.
J.Mol.Biol., 335, 2004
1QZB
DownloadVisualize
BU of 1qzb by Molmil
Coordinates of the A-site tRNA model fitted into the cryo-EM map of 70S ribosome in the pre-translocational state
分子名称: Phe-tRNA
著者Valle, M, Zavialov, A, Li, W, Stagg, S.M, Sengupta, J, Nielsen, R.C, Nissen, P, Harvey, S.C, Ehrenberg, M, Frank, J.
登録日2003-09-16
公開日2003-11-04
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Incorporation of Aminoacyl-tRNA into the Ribosome as seen by Cryo-electron Microscopy
Nat.Struct.Biol., 10, 2003
6LPK
DownloadVisualize
BU of 6lpk by Molmil
A2AR crystallized in EROCOC17+4, LCP-SFX at 293 K
分子名称: 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol, Adenosine receptor A2a,Soluble cytochrome b562,Adenosine receptor A2a, CHOLESTEROL, ...
著者Ihara, K, Hato, M, Nakane, T, Yamashita, K, Kimura-Someya, T, Hosaka, T, Ishizuka-Katsura, Y, Tanaka, R, Tanaka, T, Sugahara, M, Hirata, K, Yamamoto, M, Nureki, O, Tono, K, Nango, E, Iwata, S, Shirouzu, M.
登録日2020-01-10
公開日2020-11-25
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Isoprenoid-chained lipid EROCOC 17+4 : a new matrix for membrane protein crystallization and a crystal delivery medium in serial femtosecond crystallography.
Sci Rep, 10, 2020
1QZD
DownloadVisualize
BU of 1qzd by Molmil
EF-Tu.kirromycin coordinates fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin) bound 70S ribosome
分子名称: Elongation factor Tu
著者Valle, M, Zavialov, A, Li, W, Stagg, S.M, Sengupta, J, Nielsen, R.C, Nissen, P, Harvey, S.C, Ehrenberg, M, Frank, J.
登録日2003-09-16
公開日2003-11-04
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Incorporation of Aminoacyl-tRNA into the Ribosome as seen by Cryo-electron Microscopy
Nat.Struct.Biol., 10, 2003
1QX8
DownloadVisualize
BU of 1qx8 by Molmil
Crystal structure of a five-residue deletion mutant of the Rop protein
分子名称: Regulatory protein ROP
著者Glykos, N.M, Vlassi, M, Papanikolaou, Y, Kotsifaki, D, Cesareni, G, Kokkinidis, M.
登録日2003-09-04
公開日2004-09-28
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Loopless Rop: structure and dynamics of an engineered homotetrameric variant of the repressor of primer protein.
Biochemistry, 45, 2006
1QXM
DownloadVisualize
BU of 1qxm by Molmil
Crystal structure of a hemagglutinin component (HA1) from type C Clostridium botulinum
分子名称: 1,2-ETHANEDIOL, HA1
著者Inoue, K, Sobhany, M, Transue, T.R, Oguma, K, Pedersen, L.C, Negishi, M.
登録日2003-09-08
公開日2004-01-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural analysis by X-ray crystallography and calorimetry of a haemagglutinin component (HA1) of the progenitor toxin from Clostridium botulinum.
Microbiology, 149, 2003
1R0F
DownloadVisualize
BU of 1r0f by Molmil
Gallium-substituted rubredoxin
分子名称: GALLIUM (III) ION, Rubredoxin
著者Maher, M, Cross, M, Wilce, M.C.J, Guss, J.M, Wedd, A.G.
登録日2003-09-22
公開日2004-02-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Metal-substituted derivatives of the rubredoxin from Clostridium pasteurianum.
Acta Crystallogr.,Sect.D, 60, 2004
1R0H
DownloadVisualize
BU of 1r0h by Molmil
cobalt-substituted rubredoxin
分子名称: COBALT (II) ION, Rubredoxin
著者Maher, M, Cross, M, Wilce, M.C.J, Guss, J.M, Wedd, A.G.
登録日2003-09-22
公開日2004-02-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Metal-substituted derivatives of the rubredoxin from Clostridium pasteurianum.
Acta Crystallogr.,Sect.D, 60, 2004
6ZLE
DownloadVisualize
BU of 6zle by Molmil
Solution structure of unliganded MLKL executioner domain
分子名称: Mixed lineage kinase domain-like protein
著者Ruebbelke, M, Bauer, M, Nar, H, Zeeb, M.
登録日2020-06-30
公開日2020-12-16
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Locking mixed-lineage kinase domain-like protein in its auto-inhibited state prevents necroptosis.
Proc.Natl.Acad.Sci.USA, 117, 2020
6ZMO
DownloadVisualize
BU of 6zmo by Molmil
SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complex
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Thoms, M, Buschauer, R, Ameismeier, M, Denk, T, Kratzat, H, Mackens-Kiani, T, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R.
登録日2020-07-03
公開日2020-08-19
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis for translational shutdown and immune evasion by the Nsp1 protein of SARS-CoV-2.
Science, 369, 2020
2Q89
DownloadVisualize
BU of 2q89 by Molmil
Crystal structure of EhuB in complex with hydroxyectoine
分子名称: (4S,5S)-5-HYDROXY-2-METHYL-1,4,5,6-TETRAHYDROPYRIMIDINE-4-CARBOXYLIC ACID, CADMIUM ION, Putative ABC transporter amino acid-binding protein
著者Hanekop, N, Hoeing, M, Sohn-Bosser, L, Jebbar, M, Schmitt, L, Bremer, E.
登録日2007-06-09
公開日2008-01-01
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the ligand-binding protein EhuB from Sinorhizobium meliloti reveals substrate recognition of the compatible solutes ectoine and hydroxyectoine.
J.Mol.Biol., 374, 2007
1QZA
DownloadVisualize
BU of 1qza by Molmil
Coordinates of the A/T site tRNA model fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin) bound 70S ribosome
分子名称: Phe-tRNA
著者Valle, M, Zavialov, A, Li, W, Stagg, S.M, Sengupta, J, Nielsen, R.C, Nissen, P, Harvey, S.C, Ehrenberg, M, Frank, J.
登録日2003-09-16
公開日2003-11-04
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Incorporation of Aminoacyl-tRNA into the Ribosome as seen by Cryo-electron Microscopy
Nat.Struct.Biol., 10, 2003
3CB6
DownloadVisualize
BU of 3cb6 by Molmil
Crystal Structure of the S. pombe Peptidase Homology Domain of FACT complex subunit Spt16 (form B)
分子名称: FACT complex subunit spt16
著者Stuwe, T, Hothorn, M, Lejeune, E, Bortfeld-Miller, M, Scheffzek, K, Ladurner, A.G.
登録日2008-02-21
公開日2008-06-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献The FACT Spt16 "peptidase" domain is a histone H3-H4 binding module
Proc.Natl.Acad.Sci.USA, 105, 2008
5WZN
DownloadVisualize
BU of 5wzn by Molmil
Alpha-N-acetylgalactosaminidase NagBb from Bifidobacterium bifidum - GalNAc complex
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, Alpha-N-acetylgalactosaminidase, CALCIUM ION, ...
著者Sato, M, Arakawa, T, Ashida, H, Fushinobu, S.
登録日2017-01-18
公開日2017-06-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The first crystal structure of a family 129 glycoside hydrolase from a probiotic bacterium reveals critical residues and metal cofactors
J. Biol. Chem., 292, 2017
6ZMI
DownloadVisualize
BU of 6zmi by Molmil
SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complex
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Thoms, M, Buschauer, R, Ameismeier, M, Denk, T, Kratzat, H, Mackens-Kiani, T, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R.
登録日2020-07-02
公開日2020-08-19
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural basis for translational shutdown and immune evasion by the Nsp1 protein of SARS-CoV-2.
Science, 369, 2020
1QKT
DownloadVisualize
BU of 1qkt by Molmil
MUTANT ESTROGEN NUCLEAR RECEPTOR LIGAND BINDING DOMAIN COMPLEXED WITH ESTRADIOL
分子名称: ESTRADIOL, ESTRADIOL RECEPTOR
著者Ruff, M, Gangloff, M, Eiler, S, Duclaud, S, Wurtz, J.M, Moras, D.
登録日1999-08-05
公開日2000-08-18
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of a Mutant Heralpha Ligand- Binding Domain Reveals Key Structural Features for the Mechanism of Partial Agonism
J.Biol.Chem., 276, 2001
1QNJ
DownloadVisualize
BU of 1qnj by Molmil
THE STRUCTURE OF NATIVE PORCINE PANCREATIC ELASTASE AT ATOMIC RESOLUTION (1.1 A)
分子名称: ELASTASE, SODIUM ION, SULFATE ION
著者Wurtele, M, Hahn, M, Hilpert, K, Hohne, W.
登録日1999-10-15
公開日2000-03-31
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Atomic Resolution Structure of Native Porcine Pancreatic Elastase at 1.1 A
Acta Crystallogr.,Sect.D, 56, 2000
8EBG
DownloadVisualize
BU of 8ebg by Molmil
Crystal structure of the probable FhuD FeIII-dicitrate-binding domain protein FecB from Mycobacterium tuberculosis
分子名称: ACETIC ACID, FEIII-dicitrate-binding periplasmic lipoprotein FecB, FORMIC ACID, ...
著者Cuff, M, Kim, Y, Endres, M, Gu, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2022-08-31
公開日2022-09-14
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Crystal structure of the probable FhuD FeIII-dicitrate-binding domain protein FecB from Mycobacterium tuberculosis
To Be Published
6ZM7
DownloadVisualize
BU of 6zm7 by Molmil
SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complex
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Thoms, M, Buschauer, R, Ameismeier, M, Denk, T, Kratzat, H, Mackens-Kiani, T, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R.
登録日2020-07-01
公開日2020-07-29
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structural basis for translational shutdown and immune evasion by the Nsp1 protein of SARS-CoV-2.
Science, 369, 2020

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon