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PDB: 52230 件
1EB4
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Histidine Ammonia-Lyase (HAL) Mutant F329A from Pseudomonas putida
分子名称: GLYCEROL, HISTIDINE AMMONIA-LYASE, SULFATE ION
著者Baedeker, M, Schulz, G.E.
登録日2001-07-19
公開日2002-02-21
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Autocatalytic Peptide Cyclization During Chain Folding of Histidine Ammonia-Lyase.
Structure, 10, 2002
7X73
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Structure of G9a in complex with RK-701
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Histone-lysine N-methyltransferase EHMT2, ...
著者Niwa, H, Shirai, F, Sato, S, Nishigaya, Y, Shirouzu, M, Umehara, T.
登録日2022-03-09
公開日2022-12-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献A specific G9a inhibitor unveils BGLT3 lncRNA as a universal mediator of chemically induced fetal globin gene expression.
Nat Commun, 14, 2023
1E7Q
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GDP 4-keto-6-deoxy-D-mannose epimerase reductase S107A
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETYLPHOSPHATE, GDP-FUCOSE SYNTHETASE, ...
著者Rosano, C, Izzo, G, Bolognesi, M.
登録日2000-09-07
公開日2000-10-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Probing the Catalytic Mechanism of Gdp-4-Keto-6-Deoxy-D-Mannose Epimerase/Reductase by Kinetic and Crystallographic Characterization of Site-Specific Mutants
J.Mol.Biol., 303, 2000
1EHA
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CRYSTAL STRUCTURE OF GLYCOSYLTREHALOSE TREHALOHYDROLASE FROM SULFOLOBUS SOLFATARICUS
分子名称: GLYCOSYLTREHALOSE TREHALOHYDROLASE
著者Feese, M.D, Kato, Y, Tamada, T, Kato, M, Komeda, T, Kobayashi, K, Kuroki, R.
登録日2000-02-19
公開日2001-02-19
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of glycosyltrehalose trehalohydrolase from the hyperthermophilic archaeum Sulfolobus solfataricus.
J.Mol.Biol., 301, 2000
4TNJ
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RT XFEL structure of Photosystem II 500 ms after the 2nd illumination (2F) at 4.5 A resolution
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Kern, J, Tran, R, Alonso-Mori, R, Koroidov, S, Echols, N, Hattne, J, Ibrahim, M, Gul, S, Laksmono, H, Sierra, R.G, Gildea, R.J, Han, G, Hellmich, J, Lassalle-Kaiser, B, Chatterjee, R, Brewster, A, Stan, C.A, Gloeckner, C, Lampe, A, DiFiore, D, Milathianaki, D, Fry, A.R, Seibert, M.M, Koglin, J.E, Gallo, E, Uhlig, J, Sokaras, D, Weng, T.-C, Zwart, P.H, Skinner, D.E, Bogan, M.J, Messerschmidt, M, Glatzel, P, Williams, G.J, Boutet, S, Adams, P.D, Zouni, A, Messinger, J, Sauter, N.K, Bergmann, U, Yano, J, Yachandra, V.K.
登録日2014-06-04
公開日2014-07-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (4.5 Å)
主引用文献Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy.
Nat Commun, 5, 2014
8IC9
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Lys48-linked K48C-diubiquitin
分子名称: Polyubiquitin-B, Ubiquitin
著者Hiranyakorn, M, Yagi-Utsumi, M, Yanaka, S, Ohtsuka, N, Momiyama, N, Satoh, T, Kato, K.
登録日2023-02-11
公開日2023-04-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Mutational and Environmental Effects on the Dynamic Conformational Distributions of Lys48-Linked Ubiquitin Chains.
Int J Mol Sci, 24, 2023
1E4W
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crossreactive binding of a circularized peptide to an anti-TGFalpha antibody Fab-fragment
分子名称: CHLORIDE ION, CYCLIC PEPTIDE, NICKEL (II) ION, ...
著者Hahn, M, Winkler, D, Misselwitz, R, Wessner, H, Welfle, K, Zahn, G, Schneider-Mergener, J, Hoehne, W.
登録日2000-07-12
公開日2001-07-12
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Cross-Reactive Binding of Cyclic Peptides to an Anti-Tgf Alpha Antibody Fab Fragment: An X-Ray Structural and Thermodynamic Analysis
J.Mol.Biol., 314, 2001
7PLH
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Scytonema hofmannii TnsC bound to AMPPNP and DNA
分子名称: DNA (5'-D(P*AP*TP*AP*TP*AP*TP*AP*TP*AP*TP*AP*TP*AP*TP*AP*TP*AP*TP*AP*TP*AP*T)-3'), MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Querques, I, Jinek, M.
登録日2021-08-31
公開日2021-12-01
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.57 Å)
主引用文献Target site selection and remodelling by type V CRISPR-transposon systems.
Nature, 599, 2021
8OGP
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PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B03
分子名称: 2-[(1~{S})-1-azanylpropyl]phenol, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
著者Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
登録日2023-03-20
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B03
To Be Published
8OGR
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BU of 8ogr by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B07
分子名称: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, N-[3-(diethylamino)phenyl]ethanamide
著者Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
登録日2023-03-20
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B07
To Be Published
8OGU
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PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C07
分子名称: 3,4-dihydro-1~{H}-quinolin-2-one, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
著者Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
登録日2023-03-20
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C07
To Be Published
8OGW
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PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D02
分子名称: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, ~{N}-[5-azanyl-2,4-bis(fluoranyl)phenyl]propane-1-sulfonamide
著者Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
登録日2023-03-20
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D02
To Be Published
7UDZ
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Designed pentameric proton channel LQLL
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, De novo designed pentameric proton channel LQLL
著者Kratochvil, H.T, Thomaston, J.L, Mravic, M, Nicoludis, J.M, Liu, L, DeGrado, W.F.
登録日2022-03-20
公開日2022-04-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Transient water wires mediate selective proton transport in designed channel proteins.
Nat.Chem., 15, 2023
8OH1
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PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry E04
分子名称: 3-phenyl-1,2-oxazol-5-amine, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
著者Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
登録日2023-03-20
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry E04
To Be Published
7UDW
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Designed pentameric proton channel QQLL
分子名称: De novo designed pentameric proton channel QQLL
著者Kratochvil, H.T, Thomaston, J.L, Mravic, M, Nicoludis, J, Liu, L, DeGrado, W.F.
登録日2022-03-20
公開日2022-04-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Transient water wires mediate selective proton transport in designed channel proteins.
Nat.Chem., 15, 2023
1EE1
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CRYSTAL STRUCTURE OF NH3-DEPENDENT NAD+ SYNTHETASE FROM BACILLUS SUBTILIS COMPLEXED WITH ONE MOLECULE ATP, TWO MOLECULES DEAMIDO-NAD+ AND ONE MG2+ ION
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, NH(3)-DEPENDENT NAD(+) SYNTHETASE, ...
著者Devedjiev, Y, Symersky, J, Singh, R, Jedrzejas, M, Brouillette, C, Brouillette, W, Muccio, D, Chattopadhyay, D, Delucas, L.
登録日2000-01-28
公開日2001-06-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Stabilization of active-site loops in NH3-dependent NAD+ synthetase from Bacillus subtilis.
Acta Crystallogr.,Sect.D, 57, 2001
7U97
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SAAV pH 4.0 capsid structure
分子名称: Capsid protein
著者Mietzsch, M, McKenna, R.
登録日2022-03-10
公開日2022-04-13
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.66 Å)
主引用文献Characterization of the Serpentine Adeno-Associated Virus (SAAV) Capsid Structure: Receptor Interactions and Antigenicity.
J.Virol., 96, 2022
7PDU
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BU of 7pdu by Molmil
Pre-catalytic complex of 10-23 DNAzyme with RNA target
分子名称: 10-23 DNAzyme (33-MER), RNA target (19-MER)
著者Etzkorn, M, Borggrafe, J, Viegas, A.
登録日2021-08-07
公開日2021-12-15
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Time-resolved structural analysis of an RNA-cleaving DNA catalyst.
Nature, 601, 2022
6XHW
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BU of 6xhw by Molmil
Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Svetlov, M.S, Syroegin, E.A, Aleksandrova, E.V, Atkinson, G.C, Gregory, S.T, Mankin, A.S, Polikanov, Y.S.
登録日2020-06-19
公開日2020-12-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of Erm-modified 70S ribosome reveals the mechanism of macrolide resistance.
Nat.Chem.Biol., 17, 2021
7U95
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SAAV pH 6.0 capsid structure
分子名称: Capsid protein
著者Mietzsch, M, McKenna, R.
登録日2022-03-10
公開日2022-04-13
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.73 Å)
主引用文献Characterization of the Serpentine Adeno-Associated Virus (SAAV) Capsid Structure: Receptor Interactions and Antigenicity.
J.Virol., 96, 2022
7Q1B
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Crystal structure of Trypanosoma cruzi histone deacetylase DAC2 complexed with Quisinostat
分子名称: 2-[4-[[(1-methylindol-3-yl)methylamino]methyl]piperidin-1-yl]-~{N}-oxidanyl-pyrimidine-5-carboxamide, GLYCEROL, Histone deacetylase DAC2, ...
著者Marek, M, Ramos-Morales, E, Romier, C.
登録日2021-10-18
公開日2021-12-15
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Species-selective targeting of pathogens revealed by the atypical structure and active site of Trypanosoma cruzi histone deacetylase DAC2.
Cell Rep, 37, 2021
7U96
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SAAV pH 5.5 capsid structure
分子名称: Capsid protein
著者Mietzsch, M, McKenna, R.
登録日2022-03-10
公開日2022-04-13
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.14 Å)
主引用文献Characterization of the Serpentine Adeno-Associated Virus (SAAV) Capsid Structure: Receptor Interactions and Antigenicity.
J.Virol., 96, 2022
7U94
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SAAV pH 7.4 capsid structure
分子名称: Capsid protein
著者Mietzsch, M, McKenna, R.
登録日2022-03-10
公開日2022-04-13
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Characterization of the Serpentine Adeno-Associated Virus (SAAV) Capsid Structure: Receptor Interactions and Antigenicity.
J.Virol., 96, 2022
1EL1
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X-RAY CRYSTAL STRUCTURE ANALYSIS OF CANINE MILK LYSOZYME (HOLO-TYPE)
分子名称: CALCIUM ION, LYSOZYME C
著者Koshiba, T, Yao, M, Tanaka, I, Nitta, K.
登録日2000-03-13
公開日2001-03-13
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Calcium Induced Conformational Changes of Canine Milk Lysozyme Revealed by Structural and Thermodynamical Evidences
To be Published
8OGQ
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PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B06
分子名称: (1S)-1-(4-nitrophenyl)ethan-1-ol, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
著者Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
登録日2023-03-20
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B06
To Be Published

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件を2024-11-06に公開中

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