Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 52259 件

7K19
DownloadVisualize
BU of 7k19 by Molmil
CryoEM structure of DNA-PK catalytic subunit complexed with DNA (Complex I)
分子名称: DNA (5'-D(*AP*AP*GP*CP*AP*GP*TP*AP*GP*AP*GP*CP*AP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*TP*GP*CP*TP*CP*TP*AP*CP*TP*GP*CP*TP*TP*CP*GP*AP*TP*AP*TP*CP*G)-3'), DNA-dependent protein kinase catalytic subunit
著者Chen, X, Gellert, M, Yang, W.
登録日2020-09-07
公開日2021-01-06
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structure of an activated DNA-PK and its implications for NHEJ.
Mol.Cell, 81, 2021
1UX0
DownloadVisualize
BU of 1ux0 by Molmil
Bacillus subtilis cytidine deaminase with an Arg56 - Gln substitution
分子名称: CYTIDINE DEAMINASE, TETRAHYDRODEOXYURIDINE, ZINC ION
著者Johansson, E, Neuhard, J, Willemoes, M, Larsen, S.
登録日2004-02-18
公開日2004-05-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structural, Kinetic, and Mutational Studies of the Zinc Ion Environment in Tetrameric Cytidine Deaminase
Biochemistry, 43, 2004
1UPR
DownloadVisualize
BU of 1upr by Molmil
Crystal structure of the PEPP1 pleckstrin homology domain in complex with Inositol 1,3,4,5-tetrakisphosphate
分子名称: INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE, PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY A MEMBER 4
著者Milburn, C.C, Komander, D, Deak, M, Alessi, D.R, Van Aalten, D.M.F.
登録日2003-10-10
公開日2004-10-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Crystal Structure of the Pleckstrin Homology Domain of Pepp1
To be Published
7JLX
DownloadVisualize
BU of 7jlx by Molmil
Structure of the activated Roq1 resistosome directly recognizing the pathogen effector XopQ (TIR domains)
分子名称: Disease resistance protein Roq1
著者Martin, R, Qi, T, Zhang, H, Lui, F, King, M, Toth, C, Nogales, E, Staskawicz, B.J.
登録日2020-07-30
公開日2020-12-02
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structure of the activated ROQ1 resistosome directly recognizing the pathogen effector XopQ.
Science, 370, 2020
4X28
DownloadVisualize
BU of 4x28 by Molmil
Crystal structure of the ChsE4-ChsE5 complex from Mycobacterium tuberculosis
分子名称: Acyl-CoA dehydrogenase, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE
著者Guja, K.E, Yang, M, Sampson, N, Garcia-Diaz, M.
登録日2014-11-26
公開日2015-02-18
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Unraveling Cholesterol Catabolism in Mycobacterium tuberculosis: ChsE4-ChsE5 alpha 2 beta 2 Acyl-CoA Dehydrogenase Initiates beta-Oxidation of 3-Oxo-cholest-4-en-26-oyl CoA.
Acs Infect Dis., 1, 2015
7K37
DownloadVisualize
BU of 7k37 by Molmil
Structure of full-length influenza HA with a head-binding antibody at pH 7.8
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
著者Gui, M, Xiang, Y, Gao, J.
登録日2020-09-10
公開日2020-11-11
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural intermediates in the low pH-induced transition of influenza hemagglutinin.
Plos Pathog., 16, 2020
1URH
DownloadVisualize
BU of 1urh by Molmil
The "Rhodanese" fold and catalytic mechanism of 3-mercaptopyruvate sulfotransferases: Crystal structure of SseA from Escherichia coli
分子名称: 3-MERCAPTOPYRUVATE SULFURTRANSFERASE, SULFITE ION
著者Spallarossa, A, Forlani, F, Carpen, A, Armirotti, A, Pagani, S, Bolognesi, M, Bordo, D.
登録日2003-10-30
公開日2003-12-18
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The "Rhodanese" Fold and Catalytic Mechanism of 3-Mercaptopyruvate Sulfurtransferases: Crystal Structure of Ssea from Escherichia Coli
J.Mol.Biol., 335, 2004
7K4Z
DownloadVisualize
BU of 7k4z by Molmil
Crystal structure of Kemp Eliminase HG3.17 in complex with the transition state analog 6-nitrobenzotriazole
分子名称: 6-NITROBENZOTRIAZOLE, Endo-1,4-beta-xylanase, PENTAETHYLENE GLYCOL
著者Padua, R.A.P, Otten, R, Bunzel, A, Nguyen, V, Pitsawong, W, Patterson, M, Sui, S, Perry, S.L, Cohen, A.E, Hilvert, D, Kern, D.
登録日2020-09-16
公開日2020-12-02
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献How directed evolution reshapes the energy landscape in an enzyme to boost catalysis.
Science, 370, 2020
1UX1
DownloadVisualize
BU of 1ux1 by Molmil
Bacillus subtilis cytidine deaminase with a Cys53His and an Arg56Gln substitution
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CYTIDINE DEAMINASE, TETRAHYDRODEOXYURIDINE, ...
著者Johansson, E, Neuhard, J, Willemoes, M, Larsen, S.
登録日2004-02-18
公開日2004-05-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Structural, Kinetic, and Mutational Studies of the Zinc Ion Environment in Tetrameric Cytidine Deaminase
Biochemistry, 43, 2004
4CBT
DownloadVisualize
BU of 4cbt by Molmil
Design, synthesis, and biological evaluation of potent and selective Class IIa HDAC inhibitors as a potential therapy for Huntington's disease
分子名称: (1R,2R,3R)-2-[4-(5-fluoranylpyrimidin-2-yl)phenyl]-N-oxidanyl-3-phenyl-cyclopropane-1-carboxamide, HISTONE DEACETYLASE 4, ZINC ION
著者Burli, R.W, Luckhurst, C.A, Aziz, O, Matthews, K.L, Yates, D, Lyons, K.A, Beconi, M, McAllister, G, Breccia, P, Stott, A.J, Penrose, S.D, Wall, M, Lamers, M, Leonard, P, Mueller, I, Richardson, C.M, Jarvis, R, Stones, L, Hughes, S, Wishart, G, Haughan, A.F, O'Connell, C, Mead, T, McNeil, H, Vann, J, Mangette, J, Maillard, M, Beaumont, V, Munoz-Sanjuan, I, Dominguez, C.
登録日2013-10-16
公開日2013-12-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.03 Å)
主引用文献Design, synthesis, and biological evaluation of potent and selective class IIa histone deacetylase (HDAC) inhibitors as a potential therapy for Huntington's disease.
J. Med. Chem., 56, 2013
7K0T
DownloadVisualize
BU of 7k0t by Molmil
Cryo-EM structure of rabbit RyR1 in the presence of AMP-PCP in nanodisc
分子名称: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, RyR1, ZINC ION
著者Nayak, A.R, Samso, M.
登録日2020-09-05
公開日2021-09-22
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Ca 2+ -inactivation of the mammalian ryanodine receptor type 1 in a lipidic environment revealed by cryo-EM.
Elife, 11, 2022
1V02
DownloadVisualize
BU of 1v02 by Molmil
Crystal structure of the Sorghum bicolor dhurrinase 1
分子名称: DHURRINASE
著者Moriniere, J, Verdoucq, L, Bevan, D.R, Esen, A, Henrissat, B, Czjzek, M.
登録日2004-03-22
公開日2004-05-20
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Determinants of Substrate Specificity in Family 1 Beta-Glucosidases: Novel Insights from the Crystal Structure of Sorghum Dhurrinase-1, a Plant Beta-Glucosidase with Strict Specificity, in Complex with its Natural Substrate
J.Biol.Chem., 279, 2004
7K0S
DownloadVisualize
BU of 7k0s by Molmil
Cryo-EM structure of rabbit RyR1 in the presence of Mg2+ and AMP-PCP in nanodisc
分子名称: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, RyR1, ...
著者Nayak, A.R, Samso, M.
登録日2020-09-05
公開日2021-09-22
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Interplay between Mg2+ and Ca2+ at multiple sites of the ryanodine receptor
Nat Commun, 15, 2024
1UYW
DownloadVisualize
BU of 1uyw by Molmil
Crystal Structure of the antiflavivirus Fab4g2
分子名称: FAB ANTIBODY HEAVY CHAIN, FAB ANTIBODY LIGHT CHAIN
著者Martinez-Fleites, C, Ortiz-Lombardia, M, Taylor, E.J, Gil-Valdes, J, Chinea, G, Davies, G.
登録日2004-03-03
公開日2005-03-10
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of the Antiflavivirus Fab4G2
To be Published
5NUK
DownloadVisualize
BU of 5nuk by Molmil
Engineered beta-lactoglobulin: variant I56F-L39A-M107F in complex with chlorpromazine (LG-FAF-CLP)
分子名称: 3-(2-chloro-10H-phenothiazin-10-yl)-N,N-dimethylpropan-1-amine, Beta-lactoglobulin, CHLORIDE ION, ...
著者Loch, J.I, Bonarek, P, Tworzydlo, M, Lazinska, I, Szydlowska, J, Lewinski, K.
登録日2017-04-30
公開日2018-04-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The engineered beta-lactoglobulin with complementarity to the chlorpromazine chiral conformers.
Int. J. Biol. Macromol., 114, 2018
1VBS
DownloadVisualize
BU of 1vbs by Molmil
STRUCTURE OF CYCLOPHILIN COMPLEXED WITH (D)ALA CONTAINING TETRAPEPTIDE
分子名称: CYCLOPHILIN A, TETRAPEPTIDE
著者Zhao, Y, Chen, Y, Schutkowski, M, Fischer, G, Ke, H.
登録日1998-06-16
公開日1999-01-13
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Mapping the stereospecificity of peptidyl prolyl cis/trans isomerases.
FEBS Lett., 432, 1998
1VBT
DownloadVisualize
BU of 1vbt by Molmil
Structure of cyclophilin complexed with sulfur-substituted tetrapeptide AAPF
分子名称: CYCLOPHILIN A, SULFUR-SUBSTITUTED TETRAPEPTIDE
著者Zhao, Y, Chen, Y, Schutkowski, M, Fischer, G, Ke, H.
登録日1998-06-16
公開日1999-01-13
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Insight Into Conversion of Substrate to Inhibitor
To be Published
1UT0
DownloadVisualize
BU of 1ut0 by Molmil
CRYSTAL STRUCTURE OF CYTOGLOBIN: THE FOURTH GLOBIN TYPE DISCOVERED IN MAN DISPLAYS HEME HEXA-COORDINATION
分子名称: CYTOGLOBIN, HEXACYANOFERRATE(3-), PROTOPORPHYRIN IX CONTAINING FE
著者De Sanctis, D, Dewilde, S, Pesce, A, Moens, L, Ascenzi, P, Hankeln, T, Burmester, T, Bolognesi, M.
登録日2003-12-02
公開日2004-06-01
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of Cytoglobin: The Fourth Globin Type Discovered in Man Displays Heme Hexa-Coordination
J.Mol.Biol., 336, 2004
7JRK
DownloadVisualize
BU of 7jrk by Molmil
The Structure of BamE from Pseudomonas aeruginosa
分子名称: Outer membrane protein assembly factor BamE
著者Bi, M, Noinaj, N.
登録日2020-08-12
公開日2021-10-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献The crystal structure of BamE from Pseudomonas aeruginosa
To Be Published
5O1U
DownloadVisualize
BU of 5o1u by Molmil
Structure of wildtype T.maritima PDE (TM1595) with AMP and Mn2+
分子名称: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, CALCIUM ION, ...
著者Witte, G, Drexler, D, Mueller, M.
登録日2017-05-19
公開日2017-10-25
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and Biophysical Analysis of the Soluble DHH/DHHA1-Type Phosphodiesterase TM1595 from Thermotoga maritima.
Structure, 25, 2017
1URJ
DownloadVisualize
BU of 1urj by Molmil
Single stranded DNA-binding protein(ICP8) from Herpes simplex virus-1
分子名称: MAJOR DNA-BINDING PROTEIN, MERCURY (II) ION, ZINC ION
著者Panjikar, S, Mapelli, M, Tucker, P.A.
登録日2003-10-30
公開日2004-11-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The crystal structure of the herpes simplex virus 1 ssDNA-binding protein suggests the structural basis for flexible, cooperative single-stranded DNA binding.
J. Biol. Chem., 280, 2005
7K1U
DownloadVisualize
BU of 7k1u by Molmil
Crystal Structure of SrtB-anchored Collagen-binding Adhesin Fragment (residues 206-565) from Clostridioides difficile strain 630
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Collagen-binding Adhesin
著者Minasov, G, Shuvalova, L, Rosas-Lemus, M, Wiersum, G, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-09-08
公開日2021-10-20
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of SrtB-anchored Collagen-binding Adhesin Fragment (residues 206-565) from Clostridioides difficile strain 630
To Be Published
1UW7
DownloadVisualize
BU of 1uw7 by Molmil
Nsp9 protein from SARS-coronavirus.
分子名称: NSP9
著者Sutton, G, Fry, E, Carter, L, Sainsbury, S, Walter, T, Nettleship, J, Berrow, N, Owens, R, Gilbert, R, Davidson, A, Siddell, S, Poon, L.L.M, Diprose, J, Alderton, D, Walsh, M, Grimes, J.M, Stuart, D.I.
登録日2004-01-30
公開日2004-02-20
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The Nsp9 Replicase Protein of Sars-Coronavirus, Structure and Functional Insights
Structure, 12, 2004
1V0P
DownloadVisualize
BU of 1v0p by Molmil
Structure of P. falciparum PfPK5-Purvalanol B ligand complex
分子名称: CELL DIVISION CONTROL PROTEIN 2 HOMOLOG, PURVALANOL B
著者Holton, S, Merckx, A, Burgess, D, Doerig, C, Noble, M, Endicott, J.
登録日2004-04-01
公開日2004-05-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of P. Falciparum Pfpk5 Test the Cdk Regulation Paradigm and Suggest Mechanisms of Small Molecule Inhibition
Structure, 11, 2003
1OSB
DownloadVisualize
BU of 1osb by Molmil
Conjugative Relaxase TrwC in complex with OriT Dna. Metal-free structure.
分子名称: Dna oligonucleotide, SULFATE ION, TrwC protein
著者Guasch, A, Lucas, M, Moncalian, G, Cabezas, M, Perez-Luque, R, Gomis-Ruth, F.X, de la Cruz, F, Coll, M.
登録日2003-03-19
公開日2003-11-25
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Recognition and processing of the origin of transfer DNA by conjugative relaxase TrwC.
Nat.Struct.Biol., 10, 2003

227344

件を2024-11-13に公開中

PDB statisticsPDBj update infoContact PDBjnumon