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PDB: 51689 件

7K1V
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Partial open state of Mycobacterium tuberculosis zinc metalloprotease 1
分子名称: Zinc metalloprotease
著者Mancl, J.M, Liang, W.G, Zhao, M, Tang, W.
登録日2020-09-08
公開日2020-12-23
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structural analysis of Mycobacterium tuberculosis M13 metalloprotease Zmp1 open states.
Structure, 29, 2021
7E6T
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BU of 7e6t by Molmil
Structural insights into the activation of human calcium-sensing receptor
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CYCLOMETHYLTRYPTOPHAN, ...
著者Geng, Y, Chen, X.C, Wang, L, Cui, Q.Q, Ding, Z.Y, Han, L, Kou, Y.J, Zhang, W.Q, Wang, H.N, Jia, X.M, Dai, M, Shi, Z.Z, Li, Y.Y, Li, X.Y.
登録日2021-02-24
公開日2021-09-22
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural insights into the activation of human calcium-sensing receptor.
Elife, 10, 2021
6S39
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Fragment AZ-018 binding at the p53pT387/14-3-3 sigma interface
分子名称: 14-3-3 protein sigma, 5-(3-azanylpropyl)-4-phenyl-thiophene-2-carboximidamide, CALCIUM ION, ...
著者Genet, S, Wolter, M, Guillory, X, Somsen, B, Leysen, S, Castaldi, P, Ottmann, C.
登録日2019-06-24
公開日2020-06-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Fragment-based Differential Targeting of PPI Stabilizer Interfaces.
J.Med.Chem., 63, 2020
7E6U
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the complex of inactive CaSR and NB2D11
分子名称: Extracellular calcium-sensing receptor, NB-2D11
著者Geng, Y, Chen, X.C, Wang, L, Cui, Q.Q, Ding, Z.Y, Han, L, Kou, Y.J, Zhang, W.Q, Wang, H.N, Jia, X.M, Dai, M, Shi, Z.Z, Li, Y.Y, Li, X.Y.
登録日2021-02-24
公開日2021-09-22
実験手法ELECTRON MICROSCOPY (6 Å)
主引用文献Structural insights into the activation of human calcium-sensing receptor.
Elife, 10, 2021
6S62
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Crystal structure of 2-methylcitrate dehydratase (PrpD) from Pseudomonas aeruginosa in apo form.
分子名称: Propionate catabolic protein PrpD
著者Wijaya, A.J, Brear, P, Dolan, S.K, Welch, M.
登録日2019-07-02
公開日2020-10-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Crystal structure of 2-methylcitrate dehydratase (PrpD) from Pseudomonas aeruginosa in apo form.
To Be Published
7DVU
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Crystal structure of heme sensor protein PefR in complex with heme and cyanide
分子名称: CYANIDE ION, HTH marR-type domain-containing protein, PROTOPORPHYRIN IX CONTAINING FE
著者Nishinaga, M, Nagai, S, Nishitani, Y, Sugimoto, H, Shiro, Y, Sawai, H.
登録日2021-01-15
公開日2021-09-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Heme controls the structural rearrangement of its sensor protein mediating the hemolytic bacterial survival.
Commun Biol, 4, 2021
7DVT
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BU of 7dvt by Molmil
Crystal structure of heme sensor protein PefR in complex with heme and carbon monoxide
分子名称: CARBON MONOXIDE, HTH marR-type domain-containing protein, PROTOPORPHYRIN IX CONTAINING FE
著者Nishinaga, M, Nagai, S, Nishitani, Y, Sugimoto, H, Shiro, Y, Sawai, H.
登録日2021-01-15
公開日2021-09-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Heme controls the structural rearrangement of its sensor protein mediating the hemolytic bacterial survival.
Commun Biol, 4, 2021
1WBL
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BU of 1wbl by Molmil
WINGED BEAN LECTIN COMPLEXED WITH METHYL-ALPHA-D-GALACTOSE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, MANGANESE (II) ION, ...
著者Prabu, M.M, Sankaranarayanan, R, Puri, K.D, Sharma, V, Surolia, A, Vijayan, M, Suguna, K.
登録日1997-04-04
公開日1998-04-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Carbohydrate specificity and quaternary association in basic winged bean lectin: X-ray analysis of the lectin at 2.5 A resolution.
J.Mol.Biol., 276, 1998
7DVR
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BU of 7dvr by Molmil
Crystal structure of heme sensor protein PefR from Streptococcus agalactiae in complex with heme
分子名称: COBALT (II) ION, HTH marR-type domain-containing protein, PROTOPORPHYRIN IX CONTAINING FE
著者Nishinaga, M, Nagai, S, Nishitani, Y, Sugimoto, H, Shiro, Y, Sawai, H.
登録日2021-01-15
公開日2021-09-29
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Heme controls the structural rearrangement of its sensor protein mediating the hemolytic bacterial survival.
Commun Biol, 4, 2021
7DVV
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BU of 7dvv by Molmil
Heme sensor protein PefR from Streptococcus agalactiae bound to operator DNA (28-mer)
分子名称: DNA (28-MER), HTH marR-type domain-containing protein
著者Nishinaga, M, Nagai, S, Nishitani, Y, Sugimoto, H, Shiro, Y, Sawai, H.
登録日2021-01-15
公開日2021-09-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Heme controls the structural rearrangement of its sensor protein mediating the hemolytic bacterial survival.
Commun Biol, 4, 2021
7E4M
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Class I Pimarane-Type Diterpene Synthases Stt4548
分子名称: Stt4548
著者Yu, J.H, Xing, B.Y, Ma, M.
登録日2021-02-14
公開日2021-10-06
最終更新日2022-04-20
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Functional characterization and structural bases of two class I diterpene synthases in pimarane-type diterpene biosynthesis
Commun Chem, 4, 2021
6RLA
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BU of 6rla by Molmil
Structure of the dynein-2 complex; motor domains
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Toropova, K, Zalyte, R, Mukhopadhyay, A.G, Mladenov, M, Carter, A.P, Roberts, A.J.
登録日2019-05-01
公開日2019-08-28
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure of the dynein-2 complex and its assembly with intraflagellar transport trains.
Nat.Struct.Mol.Biol., 26, 2019
1WH2
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BU of 1wh2 by Molmil
Solution structure of the GYF domain of a hypothetical protein from Arabidopsis thaliana
分子名称: Hypothetical protein At5g08430
著者Nameki, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-28
公開日2004-11-28
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the GYF domain of a hypothetical protein from Arabidopsis thaliana
To be Published
1UDW
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BU of 1udw by Molmil
Crystal structure of human uridine-cytidine kinase 2 complexed with a feedback-inhibitor, CTP
分子名称: CYTIDINE-5'-TRIPHOSPHATE, Uridine-cytidine kinase 2
著者Suzuki, N.N, Koizumi, K, Fukushima, M, Matsuda, A, Inagaki, F.
登録日2003-05-07
公開日2004-05-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for the specificity, catalysis, and regulation of human uridine-cytidine kinase
STRUCTURE, 12, 2004
6ROI
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BU of 6roi by Molmil
Cryo-EM structure of the partially activated Drs2p-Cdc50p
分子名称: (2R)-1-{[(R)-hydroxy{[(1R,2R,3R,4R,5S,6R)-2,3,5,6-tetrahydroxy-4-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl (5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Timcenko, M, Lyons, J.A, Januliene, D, Ulstrup, J.J, Dieudonne, T, Montigny, C, Ash, M.R, Karlsen, J.L, Boesen, T, Kuhlbrandt, W, Lenoir, G, Moeller, A, Nissen, P.
登録日2019-05-13
公開日2019-07-03
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structure and autoregulation of a P4-ATPase lipid flippase.
Nature, 571, 2019
6RFO
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ERK2 MAP kinase with the activation loop of p38alpha
分子名称: Mitogen-activated protein kinase 1,Mitogen-activated protein kinase 14,Mitogen-activated protein kinase 1
著者Livnah, O, Eitan-Wexler, M.
登録日2019-04-15
公開日2020-05-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The bacterial metalloprotease NleD selectively cleaves mitogen-activated protein kinases that have high flexibility in their activation loop.
J.Biol.Chem., 295, 2020
6RFZ
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BU of 6rfz by Molmil
Photorhabdus laumondii lectin PLL2 in complex with D-glucose
分子名称: 1,2-ETHANEDIOL, ACETATE ION, SODIUM ION, ...
著者Houser, J, Fujdiarova, E, Wimmerova, M.
登録日2019-04-16
公開日2020-07-01
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Heptabladed beta-propeller lectins PLL2 and PHL from Photorhabdus spp. recognize O-methylated sugars and influence the host immune system.
Febs J., 288, 2021
6RG1
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Photorhabdus laumondii lectin PLL2 in complex with L-rhamnose
分子名称: 1,2-ETHANEDIOL, ACETATE ION, SODIUM ION, ...
著者Houser, J, Fujdiarova, E, Wimmerova, M.
登録日2019-04-16
公開日2020-07-01
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Heptabladed beta-propeller lectins PLL2 and PHL from Photorhabdus spp. recognize O-methylated sugars and influence the host immune system.
Febs J., 288, 2021
6RG6
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BU of 6rg6 by Molmil
Crystal structure of NAD kinase 1 from Listeria monocytogenes in complexe with an inhibitor
分子名称: (2~{R},3~{R},4~{S},5~{R})-2-(6-aminopurin-9-yl)-5-[3-(6-azanyl-9~{H}-purin-8-yl)prop-2-ynoxymethyl]oxolane-3,4-diol, CITRIC ACID, NAD kinase 1
著者Gelin, M, Labesse, G.
登録日2019-04-16
公開日2020-02-19
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献From Substrate to Fragments to Inhibitor ActiveIn VivoagainstStaphylococcus aureus.
Acs Infect Dis., 6, 2020
6RG7
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BU of 6rg7 by Molmil
Crystal structure of NAD kinase 1 from Listeria monocytogenes in complexe with an inhibitor
分子名称: (2~{R},3~{R},4~{S},5~{R})-2-(6-aminopurin-9-yl)-5-[[3-(6-azanyl-9~{H}-purin-8-yl)prop-2-ynyl-methyl-amino]methyl]oxolane-3,4-diol, CITRIC ACID, NAD kinase 1
著者Gelin, M, Labesse, G.
登録日2019-04-16
公開日2020-02-19
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献From Substrate to Fragments to Inhibitor ActiveIn VivoagainstStaphylococcus aureus.
Acs Infect Dis., 6, 2020
7E4O
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Class I Pimarane-Type Diterpene Synthases from Actinomycetes
分子名称: Sat1646
著者Yu, J.H, Xing, B.Y, Ma, M.
登録日2021-02-14
公開日2021-10-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Functional characterization and structural bases of two class I diterpene synthases in pimarane-type diterpene biosynthesis
Commun Chem, 4, 2021
6RG2
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Photorhabdus laumondii lectin PLL2 in complex with 3-O-methyl-D-glucose
分子名称: 3-O-methyl-alpha-D-glucopyranose, 3-O-methyl-beta-D-glucopyranose, ACETATE ION, ...
著者Houser, J, Fujdiarova, E, Wimmerova, M.
登録日2019-04-16
公開日2020-07-01
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献Heptabladed beta-propeller lectins PLL2 and PHL from Photorhabdus spp. recognize O-methylated sugars and influence the host immune system.
Febs J., 288, 2021
6RGG
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Photorhabdus laumondii lectin PLL2 in complex with O-methylated PGL-1-derived disaccharide
分子名称: 1,2-ETHANEDIOL, 3,6-O-dimethyl-D-glucose, 6-deoxy-2,3-di-O-methyl-alpha-L-mannopyranose, ...
著者Houser, J, Fujdiarova, E, Wimmerova, M.
登録日2019-04-16
公開日2020-07-01
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Heptabladed beta-propeller lectins PLL2 and PHL from Photorhabdus spp. recognize O-methylated sugars and influence the host immune system.
Febs J., 288, 2021
6RGA
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Crystal structure of NAD kinase 1 from Listeria monocytogenes in complexe with an inhibitor
分子名称: (2~{R},3~{S},4~{R},5~{R})-2-(aminomethyl)-5-[8-[3-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy]prop-1-ynyl]-6-azanyl-purin-9-yl]oxolane-3,4-diol, CITRIC ACID, NAD kinase 1
著者Gelin, M, Labesse, G.
登録日2019-04-16
公開日2020-02-19
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献From Substrate to Fragments to Inhibitor ActiveIn VivoagainstStaphylococcus aureus.
Acs Infect Dis., 6, 2020
7E4N
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Crystal structure of Sat1646
分子名称: MAGNESIUM ION, Sat1646
著者Yu, J.H, Xing, B.Y, Ma, M.
登録日2021-02-14
公開日2021-10-06
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Functional characterization and structural bases of two class I diterpene synthases in pimarane-type diterpene biosynthesis
Commun Chem, 4, 2021

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件を2024-09-04に公開中

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